| Definition | Syntrophus aciditrophicus SB chromosome, complete genome. |
|---|---|
| Accession | NC_007759 |
| Length | 3,179,300 |
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The map label for this gene is 85860623
Identifier: 85860623
GI number: 85860623
Start: 2792122
End: 2792631
Strand: Direct
Name: 85860623
Synonym: SYN_01063
Alternate gene names: NA
Gene position: 2792122-2792631 (Clockwise)
Preceding gene: 85860603
Following gene: 85860627
Centisome position: 87.82
GC content: 46.47
Gene sequence:
>510_bases ATGAAATCACAGCAGGGCAAAACATCCATATCGCGCCACTTCCGTCCAAATTTGGACCTTCACCATTCACCATGGGTAGG ACGTACGGCGGTAAAACTCACGGAACCGGCTGCGTCCACAGCTGTCAGGATGAACAGCTCAGTGCTCTTAATTAATGGCA GCAATGGTTGTCATGATTTGTTTCAGATTATTGGTCTGAAAGACAAGGACTTCGAATTATCGATCGATTACCGCGGCGGA TGCTGGTTGGATGAAGATTATAAATCTACAGACGATAGTGTGAATGTTTGTATTGCGGATACTGGAGCTATAGGGGAAAT TTTGCGAAAAAAAGAAGACTGCGTGTATTTTAACTCCCCGAAGGCTCCAGTCGGCAAAGTGGGAATGTCCTGGAAGATCG TGGGCTTTTACCTCCCTCCGTACGATATGATGGGAAAATGGAATGAGAAAGGGGGGGGGAATTCGGGGATAAAAAAAGCC TCCGGATTTCCGGAGGCTTTTATCGTTTGA
Upstream 100 bases:
>100_bases ACAAACTGGATCGCCGGGGATTGATTCTCTAATAAATCAGCAGCATTCAAGTTGATGGATATGTACAGGGAGCGCCGTCC GGAGGGCATAAACCAAACCG
Downstream 100 bases:
>100_bases GATGAGCGGTCTGAAACAGGCTGCCGCTGTCGCTGAATTTGCGGATGCTCTTTCAGAATCCTGAAGGCTCCAGCCCGGCT TCCTTTTCTGCCTTATCGAC
Product: cytoplasmic protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 169; Mature: 169
Protein sequence:
>169_residues MKSQQGKTSISRHFRPNLDLHHSPWVGRTAVKLTEPAASTAVRMNSSVLLINGSNGCHDLFQIIGLKDKDFELSIDYRGG CWLDEDYKSTDDSVNVCIADTGAIGEILRKKEDCVYFNSPKAPVGKVGMSWKIVGFYLPPYDMMGKWNEKGGGNSGIKKA SGFPEAFIV
Sequences:
>Translated_169_residues MKSQQGKTSISRHFRPNLDLHHSPWVGRTAVKLTEPAASTAVRMNSSVLLINGSNGCHDLFQIIGLKDKDFELSIDYRGG CWLDEDYKSTDDSVNVCIADTGAIGEILRKKEDCVYFNSPKAPVGKVGMSWKIVGFYLPPYDMMGKWNEKGGGNSGIKKA SGFPEAFIV >Mature_169_residues MKSQQGKTSISRHFRPNLDLHHSPWVGRTAVKLTEPAASTAVRMNSSVLLINGSNGCHDLFQIIGLKDKDFELSIDYRGG CWLDEDYKSTDDSVNVCIADTGAIGEILRKKEDCVYFNSPKAPVGKVGMSWKIVGFYLPPYDMMGKWNEKGGGNSGIKKA SGFPEAFIV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18604; Mature: 18604
Theoretical pI: Translated: 8.32; Mature: 8.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKSQQGKTSISRHFRPNLDLHHSPWVGRTAVKLTEPAASTAVRMNSSVLLINGSNGCHDL CCCCCCCHHHHHHCCCCCCCCCCCCCCCEEEEEECCCCCEEEEECCEEEEEECCCCHHHH FQIIGLKDKDFELSIDYRGGCWLDEDYKSTDDSVNVCIADTGAIGEILRKKEDCVYFNSP HHHHCCCCCCEEEEEECCCCCEECCCCCCCCCCEEEEEECCCHHHHHHHCCCCEEEECCC KAPVGKVGMSWKIVGFYLPPYDMMGKWNEKGGGNSGIKKASGFPEAFIV CCCCCCCCCEEEEEEEECCCHHHHCCCCCCCCCCCCCCCCCCCCCEEEC >Mature Secondary Structure MKSQQGKTSISRHFRPNLDLHHSPWVGRTAVKLTEPAASTAVRMNSSVLLINGSNGCHDL CCCCCCCHHHHHHCCCCCCCCCCCCCCCEEEEEECCCCCEEEEECCEEEEEECCCCHHHH FQIIGLKDKDFELSIDYRGGCWLDEDYKSTDDSVNVCIADTGAIGEILRKKEDCVYFNSP HHHHCCCCCCEEEEEECCCCCEECCCCCCCCCCEEEEEECCCHHHHHHHCCCCEEEECCC KAPVGKVGMSWKIVGFYLPPYDMMGKWNEKGGGNSGIKKASGFPEAFIV CCCCCCCCCEEEEEEEECCCHHHHCCCCCCCCCCCCCCCCCCCCCEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA