Click here to switch to the map view.

The map label for this gene is 85860603

Identifier: 85860603

GI number: 85860603

Start: 2774461

End: 2774898

Strand: Direct

Name: 85860603

Synonym: SYN_01043

Alternate gene names: NA

Gene position: 2774461-2774898 (Clockwise)

Preceding gene: 85860602

Following gene: 85860623

Centisome position: 87.27

GC content: 49.77

Gene sequence:

>438_bases
ATGGAACCGAAAAGAAAGACGTACTCCCCATCCTTTAAAGCCAAAGTTGTTCTGGAAGCTATCCGAGAGCAGAAGACTTC
AACGGAAATCGCCAACCGGTATCAGGTTCACCCGGGGCAGATCAGGAATTGGAAGTCCATAGCAACCCGGGGGTTGACGG
AACTTTTCTCCACTCGGAAGAAAGAAAGTGATTTGCAAAAAGAAAAACAGATTCACGATCTTTGCCGTCAGGTTGATCAG
CTGCAACGGGAACTGAACTGGCTACGGGGCAATCTGGACTTGAACCACAAGGACCGCGTATCACTCATCGACAGGCAATC
TCTGGGAATCGCCGTATGTCGTCAAGCTGAATTGCTGGGTGTTTCCAGATCCAGCGTTTACTATCAGCGGACAGGAAGTA
AGCGGGAACATCTGTTGAAGCGCCAGGTCGGTGTGTAA

Upstream 100 bases:

>100_bases
TATGCCCTTAATGACATAAGCAAAATTCTCATCCTGATGAATCCGGATTTTGGAATTCATTGCAACACATTTTTAAACTC
GTTTTAAAGGAGAAAATAAC

Downstream 100 bases:

>100_bases
ATTCATTTCGTAAGGCAGCTTTTTCACCAGTGCAGTACCTCGGACATTGCTTTACATTTCAGCCAAGGGTTGATTTTTAA
TTACCGGCAGGGCGGTCCCT

Product: transposase

Products: NA

Alternate protein names: Transposase IS3/IS

Number of amino acids: Translated: 145; Mature: 145

Protein sequence:

>145_residues
MEPKRKTYSPSFKAKVVLEAIREQKTSTEIANRYQVHPGQIRNWKSIATRGLTELFSTRKKESDLQKEKQIHDLCRQVDQ
LQRELNWLRGNLDLNHKDRVSLIDRQSLGIAVCRQAELLGVSRSSVYYQRTGSKREHLLKRQVGV

Sequences:

>Translated_145_residues
MEPKRKTYSPSFKAKVVLEAIREQKTSTEIANRYQVHPGQIRNWKSIATRGLTELFSTRKKESDLQKEKQIHDLCRQVDQ
LQRELNWLRGNLDLNHKDRVSLIDRQSLGIAVCRQAELLGVSRSSVYYQRTGSKREHLLKRQVGV
>Mature_145_residues
MEPKRKTYSPSFKAKVVLEAIREQKTSTEIANRYQVHPGQIRNWKSIATRGLTELFSTRKKESDLQKEKQIHDLCRQVDQ
LQRELNWLRGNLDLNHKDRVSLIDRQSLGIAVCRQAELLGVSRSSVYYQRTGSKREHLLKRQVGV

Specific function: Unknown

COG id: COG2963

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16943; Mature: 16943

Theoretical pI: Translated: 10.79; Mature: 10.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEPKRKTYSPSFKAKVVLEAIREQKTSTEIANRYQVHPGQIRNWKSIATRGLTELFSTRK
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH
KESDLQKEKQIHDLCRQVDQLQRELNWLRGNLDLNHKDRVSLIDRQSLGIAVCRQAELLG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHC
VSRSSVYYQRTGSKREHLLKRQVGV
CCHHHHHHHHCCCHHHHHHHHHCCC
>Mature Secondary Structure
MEPKRKTYSPSFKAKVVLEAIREQKTSTEIANRYQVHPGQIRNWKSIATRGLTELFSTRK
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH
KESDLQKEKQIHDLCRQVDQLQRELNWLRGNLDLNHKDRVSLIDRQSLGIAVCRQAELLG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHC
VSRSSVYYQRTGSKREHLLKRQVGV
CCHHHHHHHHCCCHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA