Definition Syntrophus aciditrophicus SB chromosome, complete genome.
Accession NC_007759
Length 3,179,300

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The map label for this gene is 85860561

Identifier: 85860561

GI number: 85860561

Start: 2740178

End: 2740399

Strand: Direct

Name: 85860561

Synonym: SYN_03789

Alternate gene names: NA

Gene position: 2740178-2740399 (Clockwise)

Preceding gene: 85860559

Following gene: 85860563

Centisome position: 86.19

GC content: 45.95

Gene sequence:

>222_bases
ATGCTCTCCCAGTCCGCCGCAAACCCCGCCGATCCATTTGTCCGTTTGCGATTTCCTGAATCGCTGAAGCCAGTTTTTTT
CATCCATATCGCAGCCTCCTGTCGGATTTCCGGACTTTCTTTATACGGATACGCTATGAGATATCAAAACCGGCTGTATT
GTAAAGGGGTTTCTGCATATAGCCAGTTTCATCTTGATGAAAATCGACTGAAGTGTGATTGA

Upstream 100 bases:

>100_bases
GAACGAATATCCAGAGAAGAATATACAGCAGGAGTCCAAAACCGTAGAACAAGAACAGAAACGCGAACAGCAATCTCCAG
CACCAGGACGGAATGGGCGT

Downstream 100 bases:

>100_bases
CGGAACATCCCGAGACGGAATAATTTATACGGAATAATTTATTGGGAAGGGGGCCCTGCTCATGATATATGCCCTTTTCA
AAAGAAAGGCGTCCCGAAAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 73; Mature: 73

Protein sequence:

>73_residues
MLSQSAANPADPFVRLRFPESLKPVFFIHIAASCRISGLSLYGYAMRYQNRLYCKGVSAYSQFHLDENRLKCD

Sequences:

>Translated_73_residues
MLSQSAANPADPFVRLRFPESLKPVFFIHIAASCRISGLSLYGYAMRYQNRLYCKGVSAYSQFHLDENRLKCD
>Mature_73_residues
MLSQSAANPADPFVRLRFPESLKPVFFIHIAASCRISGLSLYGYAMRYQNRLYCKGVSAYSQFHLDENRLKCD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 8364; Mature: 8364

Theoretical pI: Translated: 9.23; Mature: 9.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.1 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
6.8 %Cys+Met (Translated Protein)
4.1 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
6.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSQSAANPADPFVRLRFPESLKPVFFIHIAASCRISGLSLYGYAMRYQNRLYCKGVSAY
CCCCCCCCCCCCEEEEECCCCCCCEEEEEEECCCEECCEEEEEEEECCCCEEEEECCCCH
SQFHLDENRLKCD
HEECCCCCCEECC
>Mature Secondary Structure
MLSQSAANPADPFVRLRFPESLKPVFFIHIAASCRISGLSLYGYAMRYQNRLYCKGVSAY
CCCCCCCCCCCCEEEEECCCCCCCEEEEEEECCCEECCEEEEEEEECCCCEEEEECCCCH
SQFHLDENRLKCD
HEECCCCCCEECC

PDB accession: NA

Resolution: NA

Structure class: Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA