| Definition | Syntrophus aciditrophicus SB chromosome, complete genome. |
|---|---|
| Accession | NC_007759 |
| Length | 3,179,300 |
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The map label for this gene is mrp [H]
Identifier: 85860402
GI number: 85860402
Start: 2570222
End: 2570650
Strand: Direct
Name: mrp [H]
Synonym: SYN_03123
Alternate gene names: 85860402
Gene position: 2570222-2570650 (Clockwise)
Preceding gene: 85860401
Following gene: 85860403
Centisome position: 80.84
GC content: 52.68
Gene sequence:
>429_bases GTGGGGCGATCTGGATTATCTGGGTTTGTGGATCTCCCTCCTGGAACCGGAGATCCTTCCATCACGATCGCTCAATCCAT TCCCACCGCTGCCGTCCTTATGGTGACAACGCCACAGGAAGTCGCCCTGGCCGATGTCCGCAGGGCCATTAATTTGTTCA AAAAATTCGAGATAAACATGATCGGCCTTGTGGAAAACATGTCTTATTTCTTCGACAGGCGCTCCGAAAAACCGATTGAG ATTTTCGGCCGGGGCGGGGGTGAAAAATTAAGCAGGGAATTCGGGCTTCCTTTGCTTGCCCGGCTTCCTCTCGATCCGGA TATCGGGAGAAGCGGAGACTCCGGTGTGCCTCTGATGATTTCGTCTCCGAATTCCGAAGCGGGCCGCATCTTTCAGGTCA TTGCGGAAAAAGTCCTTTCTTCGATCTGA
Upstream 100 bases:
>100_bases GGATTATGTCATTGGGCATGCTCACCGCAGAGGGCCAGTCCATTGTCTGGCGCGGCCCTCTGGTTTCCAGGGCCATCAAG CAATTGCTGGGCGAGGTTAT
Downstream 100 bases:
>100_bases TAAAAGGCCTGATTACATTATCCATAGCGATAACATATCACCTGTTTCCTTAAAAAGTATCCAAAACAACGCTTATTCTG TGTGCAGGCGCCAATCCCTG
Product: chromosome partitioning ATPase protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 142; Mature: 141
Protein sequence:
>142_residues MGRSGLSGFVDLPPGTGDPSITIAQSIPTAAVLMVTTPQEVALADVRRAINLFKKFEINMIGLVENMSYFFDRRSEKPIE IFGRGGGEKLSREFGLPLLARLPLDPDIGRSGDSGVPLMISSPNSEAGRIFQVIAEKVLSSI
Sequences:
>Translated_142_residues MGRSGLSGFVDLPPGTGDPSITIAQSIPTAAVLMVTTPQEVALADVRRAINLFKKFEINMIGLVENMSYFFDRRSEKPIE IFGRGGGEKLSREFGLPLLARLPLDPDIGRSGDSGVPLMISSPNSEAGRIFQVIAEKVLSSI >Mature_141_residues GRSGLSGFVDLPPGTGDPSITIAQSIPTAAVLMVTTPQEVALADVRRAINLFKKFEINMIGLVENMSYFFDRRSEKPIEI FGRGGGEKLSREFGLPLLARLPLDPDIGRSGDSGVPLMISSPNSEAGRIFQVIAEKVLSSI
Specific function: Not Known. [C]
COG id: COG0489
COG function: function code D; ATPases involved in chromosome partitioning
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: In the C-terminal section; belongs to the Mrp/NBP35 ATP-binding proteins family [H]
Homologues:
Organism=Homo sapiens, GI157384956, Length=130, Percent_Identity=36.1538461538462, Blast_Score=105, Evalue=9e-24, Organism=Homo sapiens, GI118572611, Length=135, Percent_Identity=39.2592592592593, Blast_Score=105, Evalue=2e-23, Organism=Homo sapiens, GI6912540, Length=136, Percent_Identity=37.5, Blast_Score=90, Evalue=6e-19, Organism=Escherichia coli, GI87082045, Length=133, Percent_Identity=39.8496240601504, Blast_Score=112, Evalue=7e-27, Organism=Caenorhabditis elegans, GI25143050, Length=140, Percent_Identity=34.2857142857143, Blast_Score=89, Evalue=5e-19, Organism=Saccharomyces cerevisiae, GI6321347, Length=138, Percent_Identity=41.304347826087, Blast_Score=100, Evalue=9e-23, Organism=Saccharomyces cerevisiae, GI6322188, Length=102, Percent_Identity=42.156862745098, Blast_Score=91, Evalue=9e-20, Organism=Drosophila melanogaster, GI24667611, Length=133, Percent_Identity=36.8421052631579, Blast_Score=92, Evalue=2e-19, Organism=Drosophila melanogaster, GI221511043, Length=130, Percent_Identity=35.3846153846154, Blast_Score=87, Evalue=5e-18, Organism=Drosophila melanogaster, GI19921440, Length=114, Percent_Identity=42.1052631578947, Blast_Score=84, Evalue=2e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR019591 - InterPro: IPR015223 - InterPro: IPR002744 - InterPro: IPR000808 [H]
Pfam domain/function: PF01883 DUF59; PF09140 MipZ; PF10609 ParA [H]
EC number: NA
Molecular weight: Translated: 15262; Mature: 15131
Theoretical pI: Translated: 5.21; Mature: 5.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGRSGLSGFVDLPPGTGDPSITIAQSIPTAAVLMVTTPQEVALADVRRAINLFKKFEINM CCCCCCCCEEECCCCCCCCCEEEECCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHCCCE IGLVENMSYFFDRRSEKPIEIFGRGGGEKLSREFGLPLLARLPLDPDIGRSGDSGVPLMI EHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHCCCEEEECCCCCCCCCCCCCCCEEEE SSPNSEAGRIFQVIAEKVLSSI ECCCCCHHHHHHHHHHHHHHCC >Mature Secondary Structure GRSGLSGFVDLPPGTGDPSITIAQSIPTAAVLMVTTPQEVALADVRRAINLFKKFEINM CCCCCCCEEECCCCCCCCCEEEECCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHCCCE IGLVENMSYFFDRRSEKPIEIFGRGGGEKLSREFGLPLLARLPLDPDIGRSGDSGVPLMI EHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHCCCEEEECCCCCCCCCCCCCCCEEEE SSPNSEAGRIFQVIAEKVLSSI ECCCCCHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8590279; 8905231 [H]