Click here to switch to the map view.

The map label for this gene is fadF [H]

Identifier: 85860395

GI number: 85860395

Start: 2565716

End: 2566876

Strand: Direct

Name: fadF [H]

Synonym: SYN_01166

Alternate gene names: 85860395

Gene position: 2565716-2566876 (Clockwise)

Preceding gene: 85860394

Following gene: 85860396

Centisome position: 80.7

GC content: 55.64

Gene sequence:

>1161_bases
ATGAAATACGCCGATATCGCCCATCGCTGTTTTCGCTGCGGCTACTGCAAATTCACCAGCGACTACGAAAATTTCAACTG
TCCCTCCTACCGGAAATACCGTTTCGACACCTTTGCCCCGGGGGGCCGGATGTGGCTGATCCGCGCCTGGCTCACTGGAG
AGATCGAAAACAGCGAACGGTTTCAGGAAATTCTCTATTCCTGCGCCACCTGTGGAAGCTGTGTCGAACACTGCGCCTTT
ACCTTCCGGGAGGATCTGGTCAACATCTTTATCGCCGCCCGGGAAGAAATGGTCAACAGCGGACGGATTCCACCGGCTGT
CAGAGATTACTTCAAGGCCATCTCCATCCACGGCAACCCTTACAATCTGCCGGCAGCGGAACGGGCCGCCTGGGCGGAAA
ATCTGCCCGTCGAAAGTTACAACGGTCAGGAATACCTATTCTATGTCGGTTGTGTCGGGTCCTATGATGAACGGGGGAGA
AAGATGGCGCAGGCGGTGAGCCGGTTGCTCTCGAAAGCCGGCGTTTCCTTCGGAATCCTGGGAGAACAGGAACCCTGCGA
CGGCAACGAGGTGCGGGTCCTGGGCGAGGCCGGTCTGTTTCAATTTCTCGCGGAAATCAACATCGCCCTTTTCCGGGAAA
GAGGAGTAAAAAAAATCATCACTCTGGATCCTCACGCCTTCAATGCCTTTACAAAGGATTATCCGGAATTCGGCGGAGAC
ATTGAGGTCCGGCATTATTCCCAGGTGCTCGTGGACCTGATCGAATCCGGGAAACTGAAGCCGAAAGCGTTTGCCGCCAA
AGCAACCTTTCATGATGCCTGCTACCTGGGAAGGCACGGGGGAGAATACAAAGCCCCCAGGAAAATTCTTCGGGCGATTC
CCGGAATCGAGCTGGTGGAAATGGATCAGAATCGTGAAAATGCCCTGTGCTGCGGCGGCGGTGGGGGGAATTTCTTCACG
GACATCCTGGGCGGAGATGCGGACAGTCCGAATCGGATCCGGGTCCGGCAAGCCCGGGAAACGGGCGCGGAGCTTCTGAT
CGTCTCCTGCCCCCAGTGCGCCAAAATGCTGGAGGATGCCATCAAGGCGGAAGGATTGGAAAATTGCCTGACCGTGATGG
ATGCGGGAGAACTTCTCGATGCCTCTATTCACGAAGATTAA

Upstream 100 bases:

>100_bases
TGGCGAAGATGGACCCGCAAACCGCAAAACTCATGAAGATGATCAAGGAGAATCTGGACCCGCAGGGGATCATGAATCCC
GGAAACTGGGAGGTTGCTGA

Downstream 100 bases:

>100_bases
AAAAGGAGTAAATACAACAAAGTAAATAGTCAGCCCAATTTGTTTCCAGGAGGCCGTCATGAGCCACATAACAGAAAAAG
GCGGGGGAACGTTCCAAGGC

Product: Fe-S oxidoreductase

Products: FADH2; dihydroxy-acetone-phosphate [C]

Alternate protein names: NA

Number of amino acids: Translated: 386; Mature: 386

Protein sequence:

>386_residues
MKYADIAHRCFRCGYCKFTSDYENFNCPSYRKYRFDTFAPGGRMWLIRAWLTGEIENSERFQEILYSCATCGSCVEHCAF
TFREDLVNIFIAAREEMVNSGRIPPAVRDYFKAISIHGNPYNLPAAERAAWAENLPVESYNGQEYLFYVGCVGSYDERGR
KMAQAVSRLLSKAGVSFGILGEQEPCDGNEVRVLGEAGLFQFLAEINIALFRERGVKKIITLDPHAFNAFTKDYPEFGGD
IEVRHYSQVLVDLIESGKLKPKAFAAKATFHDACYLGRHGGEYKAPRKILRAIPGIELVEMDQNRENALCCGGGGGNFFT
DILGGDADSPNRIRVRQARETGAELLIVSCPQCAKMLEDAIKAEGLENCLTVMDAGELLDASIHED

Sequences:

>Translated_386_residues
MKYADIAHRCFRCGYCKFTSDYENFNCPSYRKYRFDTFAPGGRMWLIRAWLTGEIENSERFQEILYSCATCGSCVEHCAF
TFREDLVNIFIAAREEMVNSGRIPPAVRDYFKAISIHGNPYNLPAAERAAWAENLPVESYNGQEYLFYVGCVGSYDERGR
KMAQAVSRLLSKAGVSFGILGEQEPCDGNEVRVLGEAGLFQFLAEINIALFRERGVKKIITLDPHAFNAFTKDYPEFGGD
IEVRHYSQVLVDLIESGKLKPKAFAAKATFHDACYLGRHGGEYKAPRKILRAIPGIELVEMDQNRENALCCGGGGGNFFT
DILGGDADSPNRIRVRQARETGAELLIVSCPQCAKMLEDAIKAEGLENCLTVMDAGELLDASIHED
>Mature_386_residues
MKYADIAHRCFRCGYCKFTSDYENFNCPSYRKYRFDTFAPGGRMWLIRAWLTGEIENSERFQEILYSCATCGSCVEHCAF
TFREDLVNIFIAAREEMVNSGRIPPAVRDYFKAISIHGNPYNLPAAERAAWAENLPVESYNGQEYLFYVGCVGSYDERGR
KMAQAVSRLLSKAGVSFGILGEQEPCDGNEVRVLGEAGLFQFLAEINIALFRERGVKKIITLDPHAFNAFTKDYPEFGGD
IEVRHYSQVLVDLIESGKLKPKAFAAKATFHDACYLGRHGGEYKAPRKILRAIPGIELVEMDQNRENALCCGGGGGNFFT
DILGGDADSPNRIRVRQARETGAELLIVSCPQCAKMLEDAIKAEGLENCLTVMDAGELLDASIHED

Specific function: Electron Transfer Protein; May Also Function As The Membrane Anchor For The Glpab Dimer. [C]

COG id: COG0247

COG function: function code C; Fe-S oxidoreductase

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 4Fe-4S ferredoxin-type domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017896
- InterPro:   IPR017900
- InterPro:   IPR004017
- InterPro:   IPR012285
- InterPro:   IPR009051 [H]

Pfam domain/function: PF02754 CCG [H]

EC number: NA

Molecular weight: Translated: 43084; Mature: 43084

Theoretical pI: Translated: 5.35; Mature: 5.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.1 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
4.1 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKYADIAHRCFRCGYCKFTSDYENFNCPSYRKYRFDTFAPGGRMWLIRAWLTGEIENSER
CCHHHHHHHHHHCCCCEECCCCCCCCCCCCCCEECCCCCCCCCEEEEEEEECCCCCCHHH
FQEILYSCATCGSCVEHCAFTFREDLVNIFIAAREEMVNSGRIPPAVRDYFKAISIHGNP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHEEECCCC
YNLPAAERAAWAENLPVESYNGQEYLFYVGCVGSYDERGRKMAQAVSRLLSKAGVSFGIL
CCCCHHHHHHHHHCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCEEEEC
GEQEPCDGNEVRVLGEAGLFQFLAEINIALFRERGVKKIITLDPHAFNAFTKDYPEFGGD
CCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHCCCC
IEVRHYSQVLVDLIESGKLKPKAFAAKATFHDACYLGRHGGEYKAPRKILRAIPGIELVE
EEEHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCEEEE
MDQNRENALCCGGGGGNFFTDILGGDADSPNRIRVRQARETGAELLIVSCPQCAKMLEDA
ECCCCCCEEEEECCCCHHHHHHHCCCCCCCCCEEEHHHHHCCCEEEEEECHHHHHHHHHH
IKAEGLENCLTVMDAGELLDASIHED
HHHCCHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MKYADIAHRCFRCGYCKFTSDYENFNCPSYRKYRFDTFAPGGRMWLIRAWLTGEIENSER
CCHHHHHHHHHHCCCCEECCCCCCCCCCCCCCEECCCCCCCCCEEEEEEEECCCCCCHHH
FQEILYSCATCGSCVEHCAFTFREDLVNIFIAAREEMVNSGRIPPAVRDYFKAISIHGNP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHEEECCCC
YNLPAAERAAWAENLPVESYNGQEYLFYVGCVGSYDERGRKMAQAVSRLLSKAGVSFGIL
CCCCHHHHHHHHHCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCEEEEC
GEQEPCDGNEVRVLGEAGLFQFLAEINIALFRERGVKKIITLDPHAFNAFTKDYPEFGGD
CCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHCCCC
IEVRHYSQVLVDLIESGKLKPKAFAAKATFHDACYLGRHGGEYKAPRKILRAIPGIELVE
EEEHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCEEEE
MDQNRENALCCGGGGGNFFTDILGGDADSPNRIRVRQARETGAELLIVSCPQCAKMLEDA
ECCCCCCEEEEECCCCHHHHHHHCCCCCCCCCEEEHHHHHCCCEEEEEECHHHHHHHHHH
IKAEGLENCLTVMDAGELLDASIHED
HHHCCHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: FAD; glycerol-3-phosphate [C]

Specific reaction: FAD + glycerol-3-phosphate = FADH2 + dihydroxy-acetone-phosphate [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9353933; 9384377 [H]