| Definition | Syntrophus aciditrophicus SB chromosome, complete genome. |
|---|---|
| Accession | NC_007759 |
| Length | 3,179,300 |
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The map label for this gene is hisC [H]
Identifier: 85860396
GI number: 85860396
Start: 2566935
End: 2567945
Strand: Direct
Name: hisC [H]
Synonym: SYN_01164
Alternate gene names: 85860396
Gene position: 2566935-2567945 (Clockwise)
Preceding gene: 85860395
Following gene: 85860398
Centisome position: 80.74
GC content: 55.19
Gene sequence:
>1011_bases ATGAGCCACATAACAGAAAAAGGCGGGGGAACGTTCCAAGGCATCAAACTCCTCCTTTGCGAAAACCCGTTGCCGCCGAT TGACCAAGCCATCGCGGCAGCCCGGTCCGAGTTGCCGCGAAGCAATTACTACACGGAACCTTATTCAGCACCTTTGCGCT CGCTCATCAGCGAACAGCTCGGCATTTCAGAACGACTCATTCACATTAATGCCGGCTCCGAGCTCATCCTCCGACAGCTC TTTGACCGTTTCGGTCAGCAGGTCCACCTGCTGACTCCGACCTATGTCCTCTTCCCCGAAATCGCGCGGCATTATACAGA AACACGACTTTCTCCTGAAAAAGATTTCGCATATGACCTGGCCGACGTAGTGATTCCCGAGGGAACCACACTAACCGTTA TCGTAAATCCAAACAACCCCAATGGGGGCGTTTTCGACATGGCCTCCTTGCCCGAGCTGTTAAGCCGCCACCCGAAGACA ATGTTCCTTATTGACGAGGCGTTCATCGGCCTGGCCGGAAAATCCGTCACGCACCTGGTTCCGAAGTATCCCAATCTGCT TGTCACCCGCACCCTCTCCAAGGCGCACAGTCTTGCAGGTTTCCGAGTAGGTTACGGCATATTTCCCGAGGCTGTCGCCG ATGACTTGAACAACCGTAACGATGCCTATCCGCTTGCCCGCCCCAGCCAGGCGGCAGCCATAGCCACACTCCAAAATGAA GAACGCATTCAGGAACGGGCTTCCCAGTTGCGCCTCTGGACAGAGGAACTCGCCGTACAATTGCGAACCCTGGGCGTGCG CACTTTTCCGACTGAAACCTATTTCTTTCTGGCGGACTTCTCACCTCATGACGCATCCAGGATTGCCGATCAGCTTCGCA GCCGCAACATCCTGATTAAGCCGCTTAACGATCCTGTACTCGGTCCGGGATATATGCGCATTACCACGGCGCTGCCGGAA GACAACCGCCGGTTCATAGATGCTTTGCGCGAGGTCATGTCCGGTGCCTAA
Upstream 100 bases:
>100_bases GATGCGGGAGAACTTCTCGATGCCTCTATTCACGAAGATTAAAAAAGGAGTAAATACAACAAAGTAAATAGTCAGCCCAA TTTGTTTCCAGGAGGCCGTC
Downstream 100 bases:
>100_bases AATCGTTCCTTTCGAGACTCACCATCGGCGCTATGAAGCGTGGTTTGAAAAGCATGAGGCCGTTTACATCTCCGAGCTGC TTGCCTTGCGCCCTTTCGTT
Product: histidinol-phosphate aminotransferase
Products: NA
Alternate protein names: Imidazole acetol-phosphate transaminase [H]
Number of amino acids: Translated: 336; Mature: 335
Protein sequence:
>336_residues MSHITEKGGGTFQGIKLLLCENPLPPIDQAIAAARSELPRSNYYTEPYSAPLRSLISEQLGISERLIHINAGSELILRQL FDRFGQQVHLLTPTYVLFPEIARHYTETRLSPEKDFAYDLADVVIPEGTTLTVIVNPNNPNGGVFDMASLPELLSRHPKT MFLIDEAFIGLAGKSVTHLVPKYPNLLVTRTLSKAHSLAGFRVGYGIFPEAVADDLNNRNDAYPLARPSQAAAIATLQNE ERIQERASQLRLWTEELAVQLRTLGVRTFPTETYFFLADFSPHDASRIADQLRSRNILIKPLNDPVLGPGYMRITTALPE DNRRFIDALREVMSGA
Sequences:
>Translated_336_residues MSHITEKGGGTFQGIKLLLCENPLPPIDQAIAAARSELPRSNYYTEPYSAPLRSLISEQLGISERLIHINAGSELILRQL FDRFGQQVHLLTPTYVLFPEIARHYTETRLSPEKDFAYDLADVVIPEGTTLTVIVNPNNPNGGVFDMASLPELLSRHPKT MFLIDEAFIGLAGKSVTHLVPKYPNLLVTRTLSKAHSLAGFRVGYGIFPEAVADDLNNRNDAYPLARPSQAAAIATLQNE ERIQERASQLRLWTEELAVQLRTLGVRTFPTETYFFLADFSPHDASRIADQLRSRNILIKPLNDPVLGPGYMRITTALPE DNRRFIDALREVMSGA >Mature_335_residues SHITEKGGGTFQGIKLLLCENPLPPIDQAIAAARSELPRSNYYTEPYSAPLRSLISEQLGISERLIHINAGSELILRQLF DRFGQQVHLLTPTYVLFPEIARHYTETRLSPEKDFAYDLADVVIPEGTTLTVIVNPNNPNGGVFDMASLPELLSRHPKTM FLIDEAFIGLAGKSVTHLVPKYPNLLVTRTLSKAHSLAGFRVGYGIFPEAVADDLNNRNDAYPLARPSQAAAIATLQNEE RIQERASQLRLWTEELAVQLRTLGVRTFPTETYFFLADFSPHDASRIADQLRSRNILIKPLNDPVLGPGYMRITTALPED NRRFIDALREVMSGA
Specific function: Histidine biosynthesis; seventh step. [C]
COG id: COG0079
COG function: function code E; Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily [H]
Homologues:
Organism=Escherichia coli, GI1788332, Length=270, Percent_Identity=29.2592592592593, Blast_Score=92, Evalue=6e-20, Organism=Saccharomyces cerevisiae, GI6322075, Length=214, Percent_Identity=25.2336448598131, Blast_Score=73, Evalue=6e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004839 - InterPro: IPR005861 - InterPro: IPR015424 - InterPro: IPR015421 - InterPro: IPR015422 [H]
Pfam domain/function: PF00155 Aminotran_1_2 [H]
EC number: =2.6.1.9 [H]
Molecular weight: Translated: 37476; Mature: 37345
Theoretical pI: Translated: 6.32; Mature: 6.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSHITEKGGGTFQGIKLLLCENPLPPIDQAIAAARSELPRSNYYTEPYSAPLRSLISEQL CCCCCCCCCCCHHHEEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHC GISERLIHINAGSELILRQLFDRFGQQVHLLTPTYVLFPEIARHYTETRLSPEKDFAYDL CCCCEEEEECCCHHHHHHHHHHHHCCEEEEECCHHHHHHHHHHHHHHHCCCCCHHHHHHH ADVVIPEGTTLTVIVNPNNPNGGVFDMASLPELLSRHPKTMFLIDEAFIGLAGKSVTHLV HHHEECCCCEEEEEECCCCCCCCEEEHHHHHHHHHCCCCEEEEEHHHHHHCCCCHHHHHC PKYPNLLVTRTLSKAHSLAGFRVGYGIFPEAVADDLNNRNDAYPLARPSQAAAIATLQNE CCCCCHHHHHHHHHHHHHCCCEECCCCCHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCH ERIQERASQLRLWTEELAVQLRTLGVRTFPTETYFFLADFSPHDASRIADQLRSRNILIK HHHHHHHHHHHHHHHHHHHHHHHHCCEECCCCEEEEEEECCCCCHHHHHHHHHCCCEEEE PLNDPVLGPGYMRITTALPEDNRRFIDALREVMSGA ECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHCCC >Mature Secondary Structure SHITEKGGGTFQGIKLLLCENPLPPIDQAIAAARSELPRSNYYTEPYSAPLRSLISEQL CCCCCCCCCCHHHEEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHC GISERLIHINAGSELILRQLFDRFGQQVHLLTPTYVLFPEIARHYTETRLSPEKDFAYDL CCCCEEEEECCCHHHHHHHHHHHHCCEEEEECCHHHHHHHHHHHHHHHCCCCCHHHHHHH ADVVIPEGTTLTVIVNPNNPNGGVFDMASLPELLSRHPKTMFLIDEAFIGLAGKSVTHLV HHHEECCCCEEEEEECCCCCCCCEEEHHHHHHHHHCCCCEEEEEHHHHHHCCCCHHHHHC PKYPNLLVTRTLSKAHSLAGFRVGYGIFPEAVADDLNNRNDAYPLARPSQAAAIATLQNE CCCCCHHHHHHHHHHHHHCCCEECCCCCHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCH ERIQERASQLRLWTEELAVQLRTLGVRTFPTETYFFLADFSPHDASRIADQLRSRNILIK HHHHHHHHHHHHHHHHHHHHHHHHCCEECCCCEEEEEEECCCCCHHHHHHHHHCCCEEEE PLNDPVLGPGYMRITTALPEDNRRFIDALREVMSGA ECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA