| Definition | Syntrophus aciditrophicus SB chromosome, complete genome. |
|---|---|
| Accession | NC_007759 |
| Length | 3,179,300 |
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The map label for this gene is 85860383
Identifier: 85860383
GI number: 85860383
Start: 2556275
End: 2556652
Strand: Direct
Name: 85860383
Synonym: SYN_01178
Alternate gene names: NA
Gene position: 2556275-2556652 (Clockwise)
Preceding gene: 85860382
Following gene: 85860384
Centisome position: 80.4
GC content: 55.29
Gene sequence:
>378_bases ATGCTCAAGTTATTATTGGTGAGCCGGGATGACGATTCGTTAAGCGGTCTGTCGGCGGCGTTAGGTGGACAGGACGATAT TGAACTGGAGATCTCCGCATCCGGAGAACAGGCCCTGGCAAGGCTGTCCGGAAAGGCTGTCGATCTCGTTGTCGCGGATG AAGACCTGGGAGATATGACGGCGCTGGATTTCTCGGCGCGGCTTCTCAAAATCAACCCCATGATCAATTGCGCCGTAGTC AGCACCCTTTCTCAGGAGGAATTTCATGAGGCTTCCGAGGGGCTCGGCATCATGGCTCAATTACCGAAGCAACCCGGCGC AGAGGATGCGGAACGGCTGATCCAGACCCTGAAGCGGATCAAGGGATTGATGTCTTGA
Upstream 100 bases:
>100_bases AAGAAGGGTGCAGGGCATATGGCGAAGAGATGAGATCGCTTAGCGCCACAGGCCCTGTGCTTTTTGTAAATACTGCGTTC ATACTGATCAGAGGACTATT
Downstream 100 bases:
>100_bases TTCATTCCGGTAGAAAACCATTCCGCGGGACACAGGCCGGGAGATACGGCAAGTCGGCGAGGATCGACGAAAATCCGTGG AACCGGATGCCTGACCGGCG
Product: response regulator receiver domain-containing protein
Products: NA
Alternate protein names: Response Regulator Receiver Domain-Containing Protein; Two-Component System Response Regulator
Number of amino acids: Translated: 125; Mature: 125
Protein sequence:
>125_residues MLKLLLVSRDDDSLSGLSAALGGQDDIELEISASGEQALARLSGKAVDLVVADEDLGDMTALDFSARLLKINPMINCAVV STLSQEEFHEASEGLGIMAQLPKQPGAEDAERLIQTLKRIKGLMS
Sequences:
>Translated_125_residues MLKLLLVSRDDDSLSGLSAALGGQDDIELEISASGEQALARLSGKAVDLVVADEDLGDMTALDFSARLLKINPMINCAVV STLSQEEFHEASEGLGIMAQLPKQPGAEDAERLIQTLKRIKGLMS >Mature_125_residues MLKLLLVSRDDDSLSGLSAALGGQDDIELEISASGEQALARLSGKAVDLVVADEDLGDMTALDFSARLLKINPMINCAVV STLSQEEFHEASEGLGIMAQLPKQPGAEDAERLIQTLKRIKGLMS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13281; Mature: 13281
Theoretical pI: Translated: 4.14; Mature: 4.14
Prosite motif: PS50110 RESPONSE_REGULATORY
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLKLLLVSRDDDSLSGLSAALGGQDDIELEISASGEQALARLSGKAVDLVVADEDLGDMT CEEEEEEECCCCCHHHHHHHCCCCCCEEEEEECCCHHHHHHHCCCEEEEEEECCCCCCEE ALDFSARLLKINPMINCAVVSTLSQEEFHEASEGLGIMAQLPKQPGAEDAERLIQTLKRI HHCCCCEEEEECCCCHHHHHHHHCHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHH KGLMS HHCCC >Mature Secondary Structure MLKLLLVSRDDDSLSGLSAALGGQDDIELEISASGEQALARLSGKAVDLVVADEDLGDMT CEEEEEEECCCCCHHHHHHHCCCCCCEEEEEECCCHHHHHHHCCCEEEEEEECCCCCCEE ALDFSARLLKINPMINCAVVSTLSQEEFHEASEGLGIMAQLPKQPGAEDAERLIQTLKRI HHCCCCEEEEECCCCHHHHHHHHCHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHH KGLMS HHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA