| Definition | Syntrophus aciditrophicus SB chromosome, complete genome. |
|---|---|
| Accession | NC_007759 |
| Length | 3,179,300 |
Click here to switch to the map view.
The map label for this gene is 85860384
Identifier: 85860384
GI number: 85860384
Start: 2556852
End: 2557574
Strand: Direct
Name: 85860384
Synonym: SYN_01177
Alternate gene names: NA
Gene position: 2556852-2557574 (Clockwise)
Preceding gene: 85860383
Following gene: 85860385
Centisome position: 80.42
GC content: 56.29
Gene sequence:
>723_bases ATGCAGATTCGCATCGTTGCAACGGGTTCAACTCCTCGGGAGCGAAGAGAGAAACGGTGGGGGCTTTCTTTTCTCATCGG TGAATCCGTACTTCTTGATACGTTCGGCCTGTCCGACCTGTTCTGGGAAAATCTCTGCAGCATGGCTGAAGACGTTTCCC GCATCCGGCATGTCGTTCTCTCCCACGAGCACTGGGATCATGTCTCCGGTCTGGAAAAATTTGCGGAGCAGAGGCCGGCG GCAACTGTTTATATCTGCCCCCACACGGAACCCTCGGTAAAGGCCTGGATCGGGGGAATGAAACTGCCGGTGGTGGAAGT GGACGATTGGCTCGAAATCGAAAAAGACGTCTTTCTTTCGGGAGAACTGGCGGGAAGCTGGAATGGAAATCCCCTATGGG AGCAGTTTCTGGTCATTCGCGAGCAGTCTCGGCTTTCCGTTCTGACGGGATGCGCGCACCCGGGTCTCTTCCCGATTCTT CAGCATGTGCGGAACCGGTTTGCCGAACCCCTCACCCTGCTGATGGGCGGCTTTCATCTGATGAACAGCCCGGAGGAAGA AATTGCAGCGGCGATCGACGCCCTTTTGATGTTCGGCGTTTCGCGGGTTGCGCCGACGCACTGTACGGGAGAACCGGCCG TTCGCCTGCTCCGGGAAGCCTTTGTAAATCGCTTTCTTACCGTAGAGGAAGGCGGCGTGATCGATACCGCTGAAGAAGTG TAA
Upstream 100 bases:
>100_bases GATGTGAAGTGGACTGATCCGGACAGTCTCAACTGTTTCATCAGAGAGTTTTTGGATATGGAACTGGAATAACAGCTAAG GAAAGGGTACAGGTATCGGT
Downstream 100 bases:
>100_bases ATTCAAGATCACGCCCGACGGCGGCATACATAAAAAGGGCGCCGTCCATTTCCTTCAAGTTTTTAACCACTCTTGCTTTT CCTGTATTGAGGTTTCCAAT
Product: metallo-beta-lactamase superfamily protein
Products: NA
Alternate protein names: Beta-Lactamase Domain Protein; Metallo-Beta-Lactamase Superfamily Protein; Beta-Lactamase Superfamily Hydrolase; Metal Dependent Hydrolase; Metal-Dependent Hydrolase; Metallo-Beta-Lactamase Superfamily Hydrolase; Metal-Dependent Hydrolases Of Beta-Lactamase Superfamily II; Beta-Lactamase-Like Protein; Hydrolase Metallo-Beta-Lactamase Superfamily; Metallo-Beta-Lactamase Family Protein; Metal-Dependent Hydrolase Of Beta-Lactamase Superfamily; Metallo-Beta-Lactamase Domain Protein; Hydrolase
Number of amino acids: Translated: 240; Mature: 240
Protein sequence:
>240_residues MQIRIVATGSTPRERREKRWGLSFLIGESVLLDTFGLSDLFWENLCSMAEDVSRIRHVVLSHEHWDHVSGLEKFAEQRPA ATVYICPHTEPSVKAWIGGMKLPVVEVDDWLEIEKDVFLSGELAGSWNGNPLWEQFLVIREQSRLSVLTGCAHPGLFPIL QHVRNRFAEPLTLLMGGFHLMNSPEEEIAAAIDALLMFGVSRVAPTHCTGEPAVRLLREAFVNRFLTVEEGGVIDTAEEV
Sequences:
>Translated_240_residues MQIRIVATGSTPRERREKRWGLSFLIGESVLLDTFGLSDLFWENLCSMAEDVSRIRHVVLSHEHWDHVSGLEKFAEQRPA ATVYICPHTEPSVKAWIGGMKLPVVEVDDWLEIEKDVFLSGELAGSWNGNPLWEQFLVIREQSRLSVLTGCAHPGLFPIL QHVRNRFAEPLTLLMGGFHLMNSPEEEIAAAIDALLMFGVSRVAPTHCTGEPAVRLLREAFVNRFLTVEEGGVIDTAEEV >Mature_240_residues MQIRIVATGSTPRERREKRWGLSFLIGESVLLDTFGLSDLFWENLCSMAEDVSRIRHVVLSHEHWDHVSGLEKFAEQRPA ATVYICPHTEPSVKAWIGGMKLPVVEVDDWLEIEKDVFLSGELAGSWNGNPLWEQFLVIREQSRLSVLTGCAHPGLFPIL QHVRNRFAEPLTLLMGGFHLMNSPEEEIAAAIDALLMFGVSRVAPTHCTGEPAVRLLREAFVNRFLTVEEGGVIDTAEEV
Specific function: Unknown
COG id: COG1237
COG function: function code R; Metal-dependent hydrolases of the beta-lactamase superfamily II
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26940; Mature: 26940
Theoretical pI: Translated: 4.91; Mature: 4.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQIRIVATGSTPRERREKRWGLSFLIGESVLLDTFGLSDLFWENLCSMAEDVSRIRHVVL CEEEEEECCCCHHHHHHHHCCHHHHHCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH SHEHWDHVSGLEKFAEQRPAATVYICPHTEPSVKAWIGGMKLPVVEVDDWLEIEKDVFLS CCCCHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHCCCCCCEEECCHHHHHHHHHEEC GELAGSWNGNPLWEQFLVIREQSRLSVLTGCAHPGLFPILQHVRNRFAEPLTLLMGGFHL CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH MNSPEEEIAAAIDALLMFGVSRVAPTHCTGEPAVRLLREAFVNRFLTVEEGGVIDTAEEV CCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHEEECCCCCCCCCCCC >Mature Secondary Structure MQIRIVATGSTPRERREKRWGLSFLIGESVLLDTFGLSDLFWENLCSMAEDVSRIRHVVL CEEEEEECCCCHHHHHHHHCCHHHHHCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH SHEHWDHVSGLEKFAEQRPAATVYICPHTEPSVKAWIGGMKLPVVEVDDWLEIEKDVFLS CCCCHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHCCCCCCEEECCHHHHHHHHHEEC GELAGSWNGNPLWEQFLVIREQSRLSVLTGCAHPGLFPILQHVRNRFAEPLTLLMGGFHL CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH MNSPEEEIAAAIDALLMFGVSRVAPTHCTGEPAVRLLREAFVNRFLTVEEGGVIDTAEEV CCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHEEECCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA