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The map label for this gene is pdaD [H]

Identifier: 85860377

GI number: 85860377

Start: 2551483

End: 2552028

Strand: Direct

Name: pdaD [H]

Synonym: SYN_01184

Alternate gene names: 85860377

Gene position: 2551483-2552028 (Clockwise)

Preceding gene: 85860376

Following gene: 85860378

Centisome position: 80.25

GC content: 52.01

Gene sequence:

>546_bases
ATGTTTTTACCGAATAAAATTTTCTTCACAAAGGGCGTCGGAACTCATCGCGCGGAACTGCATTCCTTTGAGCTGGCCCT
GCGGGACGCGGGAATAGAAAAATGCAACCTCGTACAGGTATCCAGCATCATGCCGCCGGGATGCCGGGTGATTTCACGTA
CTGAAGGCCTGCGCCTGCTGAAACCCGGTTCGATTACCTATTGCGTCATGAGCCGCTGTGCCAGCAATGAACCCAGGCGG
CTGCTGGCAGCCTCGGTCGGCTGCGCCATCCCGGCGGATAAAACCACCTATGGCTATATCAGTGAACATCATGCCTTCGG
ACAGACTGAAAAGCAGGCTGGAGATTACGCGGAAGATCTCGCAGCTGCCATGCTGGCTTCGACGTTGGGCATCGATTTCA
ATGTTGATGAAAGTTGGGATGAAAAAAAGGAAATTTTCAAGATCAGTGAAAAAATCGTGGGCACAAGAAACGTCACCCAG
TCCAGCATCGTGAAAGGTACGGATTACACAACCGTACTGGCGGCAGCGGTCTTCGTTTTTTCCTGA

Upstream 100 bases:

>100_bases
TATCTATCACCATCAGAACACAGAGGCCGCCGCCGCGTTCCGCCGGATCGTCGAATCGCTGCTGAAGCTCCGGAAATCAG
CATAAGGAGCAGAGGGTAAA

Downstream 100 bases:

>100_bases
AATTTCAGGGAAGCGATCCGCTGCGGCCCGCGTGCGGCATATAGGAAAAATGCAACATGGGATTGGAAATGACGATCACT
GGCCTGCTGATAATGGCTTC

Product: pyruvoyl-dependent arginine decarboxylase

Products: NA

Alternate protein names: PvlArgDC [H]

Number of amino acids: Translated: 181; Mature: 181

Protein sequence:

>181_residues
MFLPNKIFFTKGVGTHRAELHSFELALRDAGIEKCNLVQVSSIMPPGCRVISRTEGLRLLKPGSITYCVMSRCASNEPRR
LLAASVGCAIPADKTTYGYISEHHAFGQTEKQAGDYAEDLAAAMLASTLGIDFNVDESWDEKKEIFKISEKIVGTRNVTQ
SSIVKGTDYTTVLAAAVFVFS

Sequences:

>Translated_181_residues
MFLPNKIFFTKGVGTHRAELHSFELALRDAGIEKCNLVQVSSIMPPGCRVISRTEGLRLLKPGSITYCVMSRCASNEPRR
LLAASVGCAIPADKTTYGYISEHHAFGQTEKQAGDYAEDLAAAMLASTLGIDFNVDESWDEKKEIFKISEKIVGTRNVTQ
SSIVKGTDYTTVLAAAVFVFS
>Mature_181_residues
MFLPNKIFFTKGVGTHRAELHSFELALRDAGIEKCNLVQVSSIMPPGCRVISRTEGLRLLKPGSITYCVMSRCASNEPRR
LLAASVGCAIPADKTTYGYISEHHAFGQTEKQAGDYAEDLAAAMLASTLGIDFNVDESWDEKKEIFKISEKIVGTRNVTQ
SSIVKGTDYTTVLAAAVFVFS

Specific function: Unknown

COG id: COG1945

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the pdaD family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016104
- InterPro:   IPR016105
- InterPro:   IPR002724
- ProDom:   PD010449 [H]

Pfam domain/function: PF01862 PvlArgDC [H]

EC number: =4.1.1.19 [H]

Molecular weight: Translated: 19758; Mature: 19758

Theoretical pI: Translated: 7.41; Mature: 7.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFLPNKIFFTKGVGTHRAELHSFELALRDAGIEKCNLVQVSSIMPPGCRVISRTEGLRLL
CCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCEEEECCCCEEEE
KPGSITYCVMSRCASNEPRRLLAASVGCAIPADKTTYGYISEHHAFGQTEKQAGDYAEDL
CCCCHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCEECCHHHHHCCCCCHHHCCHHHHHH
AAAMLASTLGIDFNVDESWDEKKEIFKISEKIVGTRNVTQSSIVKGTDYTTVLAAAVFVF
HHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHCCCCCHHHHHHHHHHHC
S
C
>Mature Secondary Structure
MFLPNKIFFTKGVGTHRAELHSFELALRDAGIEKCNLVQVSSIMPPGCRVISRTEGLRLL
CCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCEEEECCCCEEEE
KPGSITYCVMSRCASNEPRRLLAASVGCAIPADKTTYGYISEHHAFGQTEKQAGDYAEDL
CCCCHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCEECCHHHHHCCCCCHHHCCHHHHHH
AAAMLASTLGIDFNVDESWDEKKEIFKISEKIVGTRNVTQSSIVKGTDYTTVLAAAVFVF
HHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHCCCCCHHHHHHHHHHHC
S
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA