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The map label for this gene is nifU [C]

Identifier: 85860378

GI number: 85860378

Start: 2552085

End: 2552801

Strand: Direct

Name: nifU [C]

Synonym: SYN_01183

Alternate gene names: 85860378

Gene position: 2552085-2552801 (Clockwise)

Preceding gene: 85860377

Following gene: 85860379

Centisome position: 80.27

GC content: 55.79

Gene sequence:

>717_bases
ATGGGATTGGAAATGACGATCACTGGCCTGCTGATAATGGCTTCGGTAATGATGGCACTGGCCCTTGCCTGGTTCGGACT
TCACTACCTGCTGAATCCGCGTATGGAGAACCCGGACGGCATCGCGAAAGTGACCGGCTCCTGTGGAGACACCATGGAGA
TCGCCCTGAAATTCAACGGACCCAGGGTGGAAGATGTTCATTGCTGGACCGACGGCTGCGCAATAAGCAAGATGTGCGTG
GAAACGGTGGGAATGCTTGCCCGCGGCAAGACCGTACCGGAACTCAGAACCATCGATACGGCATCAATCCTGGAGCGGGT
GGGACAATTGCCGGAGACGCACATGCATTGCGCCGTTCTGGCGGAAACAACCCTGCAGAAGGCTGTTTCCTTTTATACGC
TCAAAAATCCGGATGTCGACCCTTTGAGACCATCATTCCGTGAGGCACCCCCTCGGCATGACGGCCAAAACAGCCGGGAT
GACGCAGCCTTGGAGGAACAAACCACTTACGTCGTTTACCTTTTTCCTTCTGTCAGCTACGTCATGAAGGCGGAAAAAAT
CCTCAAGGAGAGGGAAATCGTCCACAAGGTGATCCCCGTCCCCCGCCATATCAGTTCCGACTGCGGCGTGTGTCTCCGGA
TTCCGGCGGATCAGCAGGAGAGAGTCACCGAAGCCCTGCGGGGAAAGGTTGCCTGGGAGAATACGGCCGAAATGTAA

Upstream 100 bases:

>100_bases
ATTACACAACCGTACTGGCGGCAGCGGTCTTCGTTTTTTCCTGAAATTTCAGGGAAGCGATCCGCTGCGGCCCGCGTGCG
GCATATAGGAAAAATGCAAC

Downstream 100 bases:

>100_bases
ACAGGGCAAGGGGATAAACGCATCGACCAGAGAGAAGACAAGAATCGGAAAGGCATAGATAAATAAATAGAACCATGTGG
GATTATACGGATAAGGTCAG

Product: nifU -like protein involved in Fe-S cluster formation

Products: NA

Alternate protein names: Nitrogen-Fixing NifU Domain Protein; Cytoplasmic Protein; NifU Protein; Nitrogen Fixation Protein NifU; NifU Domain-Containing Protein; Nitrogen Fixation Protein; Scaffold Protein; [Fe-S] Cluster Formation Protein NifU; NifU -Like Protein Involved In Fe-S Cluster Formation; Nitrogen-Fixing NifU-Like N-Terminal Domain Protein

Number of amino acids: Translated: 238; Mature: 237

Protein sequence:

>238_residues
MGLEMTITGLLIMASVMMALALAWFGLHYLLNPRMENPDGIAKVTGSCGDTMEIALKFNGPRVEDVHCWTDGCAISKMCV
ETVGMLARGKTVPELRTIDTASILERVGQLPETHMHCAVLAETTLQKAVSFYTLKNPDVDPLRPSFREAPPRHDGQNSRD
DAALEEQTTYVVYLFPSVSYVMKAEKILKEREIVHKVIPVPRHISSDCGVCLRIPADQQERVTEALRGKVAWENTAEM

Sequences:

>Translated_238_residues
MGLEMTITGLLIMASVMMALALAWFGLHYLLNPRMENPDGIAKVTGSCGDTMEIALKFNGPRVEDVHCWTDGCAISKMCV
ETVGMLARGKTVPELRTIDTASILERVGQLPETHMHCAVLAETTLQKAVSFYTLKNPDVDPLRPSFREAPPRHDGQNSRD
DAALEEQTTYVVYLFPSVSYVMKAEKILKEREIVHKVIPVPRHISSDCGVCLRIPADQQERVTEALRGKVAWENTAEM
>Mature_237_residues
GLEMTITGLLIMASVMMALALAWFGLHYLLNPRMENPDGIAKVTGSCGDTMEIALKFNGPRVEDVHCWTDGCAISKMCVE
TVGMLARGKTVPELRTIDTASILERVGQLPETHMHCAVLAETTLQKAVSFYTLKNPDVDPLRPSFREAPPRHDGQNSRDD
AALEEQTTYVVYLFPSVSYVMKAEKILKEREIVHKVIPVPRHISSDCGVCLRIPADQQERVTEALRGKVAWENTAEM

Specific function: May Be Involved In The Formation Or Repair Of [Fe-S] Clusters Present In Iron-Sulfur Proteins (Potential). [C]

COG id: COG0822

COG function: function code C; NifU homolog involved in Fe-S cluster formation

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26455; Mature: 26324

Theoretical pI: Translated: 5.90; Mature: 5.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
5.0 %Met     (Translated Protein)
8.0 %Cys+Met (Translated Protein)
3.0 %Cys     (Mature Protein)
4.6 %Met     (Mature Protein)
7.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGLEMTITGLLIMASVMMALALAWFGLHYLLNPRMENPDGIAKVTGSCGDTMEIALKFNG
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCEEEEEEEECC
PRVEDVHCWTDGCAISKMCVETVGMLARGKTVPELRTIDTASILERVGQLPETHMHCAVL
CCCCEEEEECCCHHHHHHHHHHHHHHHCCCCCCHHHHCCHHHHHHHHHCCCCHHHHHHHH
AETTLQKAVSFYTLKNPDVDPLRPSFREAPPRHDGQNSRDDAALEEQTTYVVYLFPSVSY
HHHHHHHHHHHHCCCCCCCCCCCCCHHCCCCCCCCCCCCCCHHHHCCCEEEEEECCCHHH
VMKAEKILKEREIVHKVIPVPRHISSDCGVCLRIPADQQERVTEALRGKVAWENTAEM
HHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure 
GLEMTITGLLIMASVMMALALAWFGLHYLLNPRMENPDGIAKVTGSCGDTMEIALKFNG
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCEEEEEEEECC
PRVEDVHCWTDGCAISKMCVETVGMLARGKTVPELRTIDTASILERVGQLPETHMHCAVL
CCCCEEEEECCCHHHHHHHHHHHHHHHCCCCCCHHHHCCHHHHHHHHHCCCCHHHHHHHH
AETTLQKAVSFYTLKNPDVDPLRPSFREAPPRHDGQNSRDDAALEEQTTYVVYLFPSVSY
HHHHHHHHHHHHCCCCCCCCCCCCCHHCCCCCCCCCCCCCCHHHHCCCEEEEEECCCHHH
VMKAEKILKEREIVHKVIPVPRHISSDCGVCLRIPADQQERVTEALRGKVAWENTAEM
HHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA