Click here to switch to the map view.

The map label for this gene is 85860322

Identifier: 85860322

GI number: 85860322

Start: 2504545

End: 2504832

Strand: Direct

Name: 85860322

Synonym: SYN_01247

Alternate gene names: NA

Gene position: 2504545-2504832 (Clockwise)

Preceding gene: 85860321

Following gene: 85860323

Centisome position: 78.78

GC content: 51.04

Gene sequence:

>288_bases
ATGCCAATGAAGCTCAACATAAAGGCAATTGCACTGATCAGCGGCATATTATGGGGCATGGGACTGTTTTTCATTACCTG
GTGCATGATCATATTCGATGGATGTGCAGCGGGACCGACTCTCATTGGAAGGATGTACCGTGGTTACACGATAACCCCTG
TCGGCAGCGTCATAGGGTTGGCATGGGCGTTTTTCGATGGCCTGCTTGGCGGCGCGGCATTTGCCTGGCTCTACAATAAA
ATAACCGATTTCTTTGATCCCGGCCTTCGGAAGGGCCGCAACAGTTGA

Upstream 100 bases:

>100_bases
AACTGAGCCTCTCCTATGGTGTGACTGAGCATTCCCACACGGGAAACTGCCCCGCTGCTCAACTTGATTGTTGTTCTGCA
CGAATCAGATCATGGAGTAG

Downstream 100 bases:

>100_bases
TCTGATCTCTATCGGAGAACTTGTCGATTATGGCCATGGACAGCCTCATTCCACTGTTGACGATCAGATTTGTATCGGGC
CCCGATTATTCTGAAAGGTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 95; Mature: 94

Protein sequence:

>95_residues
MPMKLNIKAIALISGILWGMGLFFITWCMIIFDGCAAGPTLIGRMYRGYTITPVGSVIGLAWAFFDGLLGGAAFAWLYNK
ITDFFDPGLRKGRNS

Sequences:

>Translated_95_residues
MPMKLNIKAIALISGILWGMGLFFITWCMIIFDGCAAGPTLIGRMYRGYTITPVGSVIGLAWAFFDGLLGGAAFAWLYNK
ITDFFDPGLRKGRNS
>Mature_94_residues
PMKLNIKAIALISGILWGMGLFFITWCMIIFDGCAAGPTLIGRMYRGYTITPVGSVIGLAWAFFDGLLGGAAFAWLYNKI
TDFFDPGLRKGRNS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10401; Mature: 10269

Theoretical pI: Translated: 9.71; Mature: 9.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
5.3 %Met     (Translated Protein)
7.4 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
6.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPMKLNIKAIALISGILWGMGLFFITWCMIIFDGCAAGPTLIGRMYRGYTITPVGSVIGL
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCHHHHHHHH
AWAFFDGLLGGAAFAWLYNKITDFFDPGLRKGRNS
HHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCCCC
>Mature Secondary Structure 
PMKLNIKAIALISGILWGMGLFFITWCMIIFDGCAAGPTLIGRMYRGYTITPVGSVIGL
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCHHHHHHHH
AWAFFDGLLGGAAFAWLYNKITDFFDPGLRKGRNS
HHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA