| Definition | Syntrophus aciditrophicus SB chromosome, complete genome. |
|---|---|
| Accession | NC_007759 |
| Length | 3,179,300 |
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The map label for this gene is 85860321
Identifier: 85860321
GI number: 85860321
Start: 2504116
End: 2504445
Strand: Direct
Name: 85860321
Synonym: SYN_01245
Alternate gene names: NA
Gene position: 2504116-2504445 (Clockwise)
Preceding gene: 85860320
Following gene: 85860322
Centisome position: 78.76
GC content: 46.97
Gene sequence:
>330_bases ATGCCTGTGTATTTACAAATATTCCTCTGGGTTGCCGCCTTTGTCGTCTTTGTCTTGCTGGCCATGTATGCAGGAGGATT TGCCGTGCGACAAGCGTGCTTCAAGCTCATCGCCGAAATGGATGAGGCTGGAGCCTTCAGCGCGGCCAAGGCGATCAATC TTCAGGACGAACGGAAAAATATCTTCCGTGTAGGCACGGGAAATATACGCCCCAAAGCGCTCAACATCCTGATCGCCGAC AAAATCGTCATGAAAACAGGCAATGGCAGATATTATCTGGACAAAGACAAGCTTGCCCAATTGAAAACTCAGTTAAAAAA TGATTTTTAA
Upstream 100 bases:
>100_bases CAATATCTTGCAGCCAAAATCCCCTTGACTCACAAAATCCTTCTCCATATAACACCATGAAGATTAATCCCGTCCGGTTC TCAATGGAAAGTTAAATAAT
Downstream 100 bases:
>100_bases ACTGAGCCTCTCCTATGGTGTGACTGAGCATTCCCACACGGGAAACTGCCCCGCTGCTCAACTTGATTGTTGTTCTGCAC GAATCAGATCATGGAGTAGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 109; Mature: 108
Protein sequence:
>109_residues MPVYLQIFLWVAAFVVFVLLAMYAGGFAVRQACFKLIAEMDEAGAFSAAKAINLQDERKNIFRVGTGNIRPKALNILIAD KIVMKTGNGRYYLDKDKLAQLKTQLKNDF
Sequences:
>Translated_109_residues MPVYLQIFLWVAAFVVFVLLAMYAGGFAVRQACFKLIAEMDEAGAFSAAKAINLQDERKNIFRVGTGNIRPKALNILIAD KIVMKTGNGRYYLDKDKLAQLKTQLKNDF >Mature_108_residues PVYLQIFLWVAAFVVFVLLAMYAGGFAVRQACFKLIAEMDEAGAFSAAKAINLQDERKNIFRVGTGNIRPKALNILIADK IVMKTGNGRYYLDKDKLAQLKTQLKNDF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12235; Mature: 12103
Theoretical pI: Translated: 10.16; Mature: 10.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPVYLQIFLWVAAFVVFVLLAMYAGGFAVRQACFKLIAEMDEAGAFSAAKAINLQDERKN CCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCHHHHHHCCCCHHHCC IFRVGTGNIRPKALNILIADKIVMKTGNGRYYLDKDKLAQLKTQLKNDF EEEECCCCCCHHHHHEEEEEEEEEEECCCCEEECHHHHHHHHHHHCCCC >Mature Secondary Structure PVYLQIFLWVAAFVVFVLLAMYAGGFAVRQACFKLIAEMDEAGAFSAAKAINLQDERKN CHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCHHHHHHCCCCHHHCC IFRVGTGNIRPKALNILIADKIVMKTGNGRYYLDKDKLAQLKTQLKNDF EEEECCCCCCHHHHHEEEEEEEEEEECCCCEEECHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA