| Definition | Syntrophus aciditrophicus SB chromosome, complete genome. |
|---|---|
| Accession | NC_007759 |
| Length | 3,179,300 |
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The map label for this gene is korA [H]
Identifier: 85860257
GI number: 85860257
Start: 2443713
End: 2444855
Strand: Direct
Name: korA [H]
Synonym: SYN_02498
Alternate gene names: 85860257
Gene position: 2443713-2444855 (Clockwise)
Preceding gene: 85860256
Following gene: 85860258
Centisome position: 76.86
GC content: 57.57
Gene sequence:
>1143_bases TTGAAAAGCAGCAGATCCGGAGAAAGGCTGCTTCAAGGCAGCGAGGCTGTTGCGGAAGCCGCCCTGCGGGCCGGTTGCCG CTTTTTTGCAGGCTATCCCATTACACCGGCAACGGAAATCGCGGAAATCATGTCTGTGAGGCTGCCGGCCGTCAATGGCA CATTCATCCAGATGGAAGACGAGATCGCCAGCATGGGGGCTATAATCGGGGCTTCCCTTGCCGGCACGAAATCGATGACC GCCACTTCGGGGCCCGGCTTTTCACTCATGCAGGAGAACCTGGGATATGCCATCATGGCCGAAATCCCCTGCGTCGTTGT CAATGTCATGCGCGGTGGACCGAGTACGGGGCTCCCCACCATGCCGTCTCAGGGTGACGTGATGCAGGCCCGGTGGGGCA CACATGGAGACCACCCCATTCTTGTCCTTTCAGCATCGACAGTCCGTGAATGCTACGACTTCACCCTCCGTGCCTTCAAC CTCTCCGAAGAGTTCAGAATCCCCGTCATTCTTCTTCTCGACGAAATTGTGGTCCACATGCGCGAGAAGGTGGCGCTTCC GCCCGAAGGTGAGGCGTTGACCGTTGAAAGGCCGCGCCCCCGGGTTCCGCCCGAGTGGTATATTCCCTACGAGGACACCC CTGCAGGCATTCCCGCCATGGCTGATTTCGGAGAAGGCTATCGATACCACGTGACCGGCCTGGCCCATGATATCAGGGGG TTTCCCACGGAAAGGCCGGACGAAATCGGGCCGCTCATGGCAAGGCTTTTCAGAAAGATCAGTCAGAGGATGGCGGACAT TCACAGCGGGGATTTCTATCAGACTGAAGATGCCGGAATCGTCATTATCGCCTACGGAAGCGTTGCCCGCACCGCGAGGC GCAGCGTCCGGATCTTGAGAGAAAGAGGAATTCAAGCCGGATTGTTGAAATTGAACACGCTCTGGCCTTTCATGAGAAAA GCCGTGGAAAGTCTGCTCCCCACGGCACGGATACTGGTGGTTCCTGAAATGAATGTGGGCCAGATCTCGCGGGAAGTGAA GCGAGTCAATCAGGGAAGGGCCCGGGTTGTGGGAGTGAACAAGATGGACGGCACCCTGATCACGCCCGACGAAATCCTCG AAAGGGTCATGGAGATTGTATGA
Upstream 100 bases:
>100_bases CCTGAGGCCTGTATTCAGTGCGGCATGTGCGAGATGAGATGCCCTGACTTTGCCATCTCCGTGGTGGGAAAAAAGACCGG GGCTTCGGTGGAGGGATAGA
Downstream 100 bases:
>100_bases CCACTGAAGTGACCAAACTGATCCACAAGTATCTCCGGCATGACAAGAAGTTTCCCCATGTGTGGTGTCCGGGCTGCGGA ATCGGCATTATTCTGGGATC
Product: 2-oxoglutarate ferredoxin oxidoreductase subunit alpha
Products: NA
Alternate protein names: 2-ketoglutarate oxidoreductase alpha chain; KOR; 2-oxoglutarate-ferredoxin oxidoreductase subunit alpha [H]
Number of amino acids: Translated: 380; Mature: 380
Protein sequence:
>380_residues MKSSRSGERLLQGSEAVAEAALRAGCRFFAGYPITPATEIAEIMSVRLPAVNGTFIQMEDEIASMGAIIGASLAGTKSMT ATSGPGFSLMQENLGYAIMAEIPCVVVNVMRGGPSTGLPTMPSQGDVMQARWGTHGDHPILVLSASTVRECYDFTLRAFN LSEEFRIPVILLLDEIVVHMREKVALPPEGEALTVERPRPRVPPEWYIPYEDTPAGIPAMADFGEGYRYHVTGLAHDIRG FPTERPDEIGPLMARLFRKISQRMADIHSGDFYQTEDAGIVIIAYGSVARTARRSVRILRERGIQAGLLKLNTLWPFMRK AVESLLPTARILVVPEMNVGQISREVKRVNQGRARVVGVNKMDGTLITPDEILERVMEIV
Sequences:
>Translated_380_residues MKSSRSGERLLQGSEAVAEAALRAGCRFFAGYPITPATEIAEIMSVRLPAVNGTFIQMEDEIASMGAIIGASLAGTKSMT ATSGPGFSLMQENLGYAIMAEIPCVVVNVMRGGPSTGLPTMPSQGDVMQARWGTHGDHPILVLSASTVRECYDFTLRAFN LSEEFRIPVILLLDEIVVHMREKVALPPEGEALTVERPRPRVPPEWYIPYEDTPAGIPAMADFGEGYRYHVTGLAHDIRG FPTERPDEIGPLMARLFRKISQRMADIHSGDFYQTEDAGIVIIAYGSVARTARRSVRILRERGIQAGLLKLNTLWPFMRK AVESLLPTARILVVPEMNVGQISREVKRVNQGRARVVGVNKMDGTLITPDEILERVMEIV >Mature_380_residues MKSSRSGERLLQGSEAVAEAALRAGCRFFAGYPITPATEIAEIMSVRLPAVNGTFIQMEDEIASMGAIIGASLAGTKSMT ATSGPGFSLMQENLGYAIMAEIPCVVVNVMRGGPSTGLPTMPSQGDVMQARWGTHGDHPILVLSASTVRECYDFTLRAFN LSEEFRIPVILLLDEIVVHMREKVALPPEGEALTVERPRPRVPPEWYIPYEDTPAGIPAMADFGEGYRYHVTGLAHDIRG FPTERPDEIGPLMARLFRKISQRMADIHSGDFYQTEDAGIVIIAYGSVARTARRSVRILRERGIQAGLLKLNTLWPFMRK AVESLLPTARILVVPEMNVGQISREVKRVNQGRARVVGVNKMDGTLITPDEILERVMEIV
Specific function: Oxidoreductase Required For The Transfer Of Electrons From Pyruvate To Flavodoxin (Potential). [C]
COG id: COG0674
COG function: function code C; Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, alpha subunit
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002880 - InterPro: IPR009014 - InterPro: IPR015941 - InterPro: IPR005476 [H]
Pfam domain/function: PF01855 POR_N; PF02780 Transketolase_C [H]
EC number: =1.2.7.3 [H]
Molecular weight: Translated: 41761; Mature: 41761
Theoretical pI: Translated: 6.53; Mature: 6.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 4.7 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 4.7 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKSSRSGERLLQGSEAVAEAALRAGCRFFAGYPITPATEIAEIMSVRLPAVNGTFIQMED CCCCCCHHHHHCCHHHHHHHHHHHCCHHHCCCCCCCHHHHHHHHHHHCCCCCCEEEEEHH EIASMGAIIGASLAGTKSMTATSGPGFSLMQENLGYAIMAEIPCVVVNVMRGGPSTGLPT HHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHCCCEEEEHHCHHHHHHHHCCCCCCCCCC MPSQGDVMQARWGTHGDHPILVLSASTVRECYDFTLRAFNLSEEFRIPVILLLDEIVVHM CCCCCCEEEECCCCCCCCCEEEEEHHHHHHHHHHHHHEECCCCCCCCHHHHHHHHHHHHH REKVALPPEGEALTVERPRPRVPPEWYIPYEDTPAGIPAMADFGEGYRYHVTGLAHDIRG HHHCCCCCCCCEEEECCCCCCCCCCEECCCCCCCCCCCCHHHCCCCCEEEEEEHHHHHCC FPTERPDEIGPLMARLFRKISQRMADIHSGDFYQTEDAGIVIIAYGSVARTARRSVRILR CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCEEEEEECHHHHHHHHHHHHHH ERGIQAGLLKLNTLWPFMRKAVESLLPTARILVVPEMNVGQISREVKRVNQGRARVVGVN HCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHCCCEEEEEEE KMDGTLITPDEILERVMEIV CCCCCEECHHHHHHHHHHHC >Mature Secondary Structure MKSSRSGERLLQGSEAVAEAALRAGCRFFAGYPITPATEIAEIMSVRLPAVNGTFIQMED CCCCCCHHHHHCCHHHHHHHHHHHCCHHHCCCCCCCHHHHHHHHHHHCCCCCCEEEEEHH EIASMGAIIGASLAGTKSMTATSGPGFSLMQENLGYAIMAEIPCVVVNVMRGGPSTGLPT HHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHCCCEEEEHHCHHHHHHHHCCCCCCCCCC MPSQGDVMQARWGTHGDHPILVLSASTVRECYDFTLRAFNLSEEFRIPVILLLDEIVVHM CCCCCCEEEECCCCCCCCCEEEEEHHHHHHHHHHHHHEECCCCCCCCHHHHHHHHHHHHH REKVALPPEGEALTVERPRPRVPPEWYIPYEDTPAGIPAMADFGEGYRYHVTGLAHDIRG HHHCCCCCCCCEEEECCCCCCCCCCEECCCCCCCCCCCCHHHCCCCCEEEEEEHHHHHCC FPTERPDEIGPLMARLFRKISQRMADIHSGDFYQTEDAGIVIIAYGSVARTARRSVRILR CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCEEEEEECHHHHHHHHHHHHHH ERGIQAGLLKLNTLWPFMRKAVESLLPTARILVVPEMNVGQISREVKRVNQGRARVVGVN HCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHCCCEEEEEEE KMDGTLITPDEILERVMEIV CCCCCEECHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9108258 [H]