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The map label for this gene is 85860256

Identifier: 85860256

GI number: 85860256

Start: 2443394

End: 2443711

Strand: Direct

Name: 85860256

Synonym: SYN_02497

Alternate gene names: NA

Gene position: 2443394-2443711 (Clockwise)

Preceding gene: 85860251

Following gene: 85860257

Centisome position: 76.85

GC content: 52.83

Gene sequence:

>318_bases
ATGCAAAGCACCGGGAAGAAGAAAACTGGCGGTAATTCGGTTTCAGGTGTTATACTTCATAAAAGACAGACGGACAGAAC
AGAGAACAGGAGTAAGAAGAAAGGGCCGTCGCACATTGACGTCTTCAGGGAGTGGTGCAAGGGTTGCGGCATCTGCGTCG
CCTTTTGCCCGAAGCAGGTGCTTGCCCTCGATGAAAACGGCCATTCATACGCGAAGAATCCTGAGGCCTGTATTCAGTGC
GGCATGTGCGAGATGAGATGCCCTGACTTTGCCATCTCCGTGGTGGGAAAAAAGACCGGGGCTTCGGTGGAGGGATAG

Upstream 100 bases:

>100_bases
ACAGATTATTTTATTTATAATTATATCAATATAAAAGAAATAGATAGCAGTTTGCGCATCAGGATTCAGAGAATGTTTTA
TCCAGGGGGCCGATTGAAAC

Downstream 100 bases:

>100_bases
ATTGAAAAGCAGCAGATCCGGAGAAAGGCTGCTTCAAGGCAGCGAGGCTGTTGCGGAAGCCGCCCTGCGGGCCGGTTGCC
GCTTTTTTGCAGGCTATCCC

Product: ferridoxin

Products: succinyl-CoA; CO2; reduced ferredoxin

Alternate protein names: Ferridoxin; 2-Ketoglutarate Oxidoreductase Subunit Delta

Number of amino acids: Translated: 105; Mature: 105

Protein sequence:

>105_residues
MQSTGKKKTGGNSVSGVILHKRQTDRTENRSKKKGPSHIDVFREWCKGCGICVAFCPKQVLALDENGHSYAKNPEACIQC
GMCEMRCPDFAISVVGKKTGASVEG

Sequences:

>Translated_105_residues
MQSTGKKKTGGNSVSGVILHKRQTDRTENRSKKKGPSHIDVFREWCKGCGICVAFCPKQVLALDENGHSYAKNPEACIQC
GMCEMRCPDFAISVVGKKTGASVEG
>Mature_105_residues
MQSTGKKKTGGNSVSGVILHKRQTDRTENRSKKKGPSHIDVFREWCKGCGICVAFCPKQVLALDENGHSYAKNPEACIQC
GMCEMRCPDFAISVVGKKTGASVEG

Specific function: Unknown

COG id: COG1146

COG function: function code C; Ferredoxin

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 1.2.7.3

Molecular weight: Translated: 11362; Mature: 11362

Theoretical pI: Translated: 8.99; Mature: 8.99

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

7.6 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
10.5 %Cys+Met (Translated Protein)
7.6 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
10.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQSTGKKKTGGNSVSGVILHKRQTDRTENRSKKKGPSHIDVFREWCKGCGICVAFCPKQV
CCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEHHCCHHH
LALDENGHSYAKNPEACIQCGMCEMRCPDFAISVVGKKTGASVEG
EEECCCCCCCCCCHHHHHHCCCCCCCCCCEEEEEECCCCCCCCCC
>Mature Secondary Structure
MQSTGKKKTGGNSVSGVILHKRQTDRTENRSKKKGPSHIDVFREWCKGCGICVAFCPKQV
CCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEHHCCHHH
LALDENGHSYAKNPEACIQCGMCEMRCPDFAISVVGKKTGASVEG
EEECCCCCCCCCCHHHHHHCCCCCCCCCCEEEEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: 2-oxoglutarate; CoA; oxidized ferredoxin

Specific reaction: 2-oxoglutarate + CoA + oxidized ferredoxin = succinyl-CoA + CO2 + reduced ferredoxin

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA