| Definition | Syntrophus aciditrophicus SB chromosome, complete genome. |
|---|---|
| Accession | NC_007759 |
| Length | 3,179,300 |
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The map label for this gene is 85860232
Identifier: 85860232
GI number: 85860232
Start: 2429516
End: 2429887
Strand: Direct
Name: 85860232
Synonym: SYN_01587
Alternate gene names: NA
Gene position: 2429516-2429887 (Clockwise)
Preceding gene: 85860230
Following gene: 85860233
Centisome position: 76.42
GC content: 43.55
Gene sequence:
>372_bases ATGAAATTGATAGAGTTGGCTAAACAAATGGATGAAGTGCGGGATTGGACCTGGGATGCAGAGTCTTACGTTAAATTTGC TATGAGTCCTCTCGAAAAAGCCATCAAGGAAATGTTGAATGATGATCCCCGCAAGAATGCTCTATTGGCCTTATTAAACT CCGGCAATGAAAAAATTCACGAAATGGCGGATCGTATTCAAACCGATATCGGCACTTTAAAAATCAGGACCAGCGGCTGG GATTCAGGCTGTTTTCGCAGAGAAAGAGTCATTGCTGCTTATATTGAGCGGGCAGATAAACCATCCTCTCCGAGTGCGAA GAAAGCACCTCACTTATTTATTGAACGAAGGCGTTACAAGCGGGAGAAATGA
Upstream 100 bases:
>100_bases GCGGCGCCTCCAGAGCCGCGTTCACATAATAAACTGAAGGTCTATTCCTTGAAGGAATTTCAGCTCACTGGAAAATAACA GCAAGCGGAGGAAATCAAGC
Downstream 100 bases:
>100_bases TATTAAGTCCCTGATATTCATTATTGAAACCCGATCCATAGCGGCTTTGCAGGCTATTGCCGTCCTGCAGACGAGAAGAT CTCGTTGATTTTAAGGTATC
Product: cytoplasmic protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 123; Mature: 123
Protein sequence:
>123_residues MKLIELAKQMDEVRDWTWDAESYVKFAMSPLEKAIKEMLNDDPRKNALLALLNSGNEKIHEMADRIQTDIGTLKIRTSGW DSGCFRRERVIAAYIERADKPSSPSAKKAPHLFIERRRYKREK
Sequences:
>Translated_123_residues MKLIELAKQMDEVRDWTWDAESYVKFAMSPLEKAIKEMLNDDPRKNALLALLNSGNEKIHEMADRIQTDIGTLKIRTSGW DSGCFRRERVIAAYIERADKPSSPSAKKAPHLFIERRRYKREK >Mature_123_residues MKLIELAKQMDEVRDWTWDAESYVKFAMSPLEKAIKEMLNDDPRKNALLALLNSGNEKIHEMADRIQTDIGTLKIRTSGW DSGCFRRERVIAAYIERADKPSSPSAKKAPHLFIERRRYKREK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14366; Mature: 14366
Theoretical pI: Translated: 9.99; Mature: 9.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLIELAKQMDEVRDWTWDAESYVKFAMSPLEKAIKEMLNDDPRKNALLALLNSGNEKIH CHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHHH EMADRIQTDIGTLKIRTSGWDSGCFRRERVIAAYIERADKPSSPSAKKAPHLFIERRRYK HHHHHHHHHHHHEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHC REK CCC >Mature Secondary Structure MKLIELAKQMDEVRDWTWDAESYVKFAMSPLEKAIKEMLNDDPRKNALLALLNSGNEKIH CHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHHH EMADRIQTDIGTLKIRTSGWDSGCFRRERVIAAYIERADKPSSPSAKKAPHLFIERRRYK HHHHHHHHHHHHEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHC REK CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA