Definition Syntrophus aciditrophicus SB chromosome, complete genome.
Accession NC_007759
Length 3,179,300

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The map label for this gene is 85860230

Identifier: 85860230

GI number: 85860230

Start: 2429154

End: 2429444

Strand: Direct

Name: 85860230

Synonym: SYN_01588

Alternate gene names: NA

Gene position: 2429154-2429444 (Clockwise)

Preceding gene: 85860229

Following gene: 85860232

Centisome position: 76.41

GC content: 47.42

Gene sequence:

>291_bases
ATGAAAATGAAAACAAAGGTGACCCCCACGAAGCGGGAATTAGCCCAATATAAGGCTCTGATTGACGTTGGTCTGACAGC
GAATGCCGTTGCCGTCAGGTTGGAAAGAGATCCGAAAACCGTGAGAAAATATCTTCGCTCTGATGTTTATAGAGACCCGG
AAATAAAGGCAATGGTCGACAAGATCAAAAAGAAGGAAATCGCTTACCTGTACTTCCTTGGGAGTAAATCCAGACAGCAG
CAGAGAGAACGGTTTACTGACGGCGGCGCCTCCAGAGCCGCGTTCACATAA

Upstream 100 bases:

>100_bases
TCCAAGAGGGGCAAACATTGAAGCGACAGGATGAATTGCCTCGATGGAATCTGGATGAGGAATAGATATTTCTTTCCAGC
ATCGGGATAGAAAGGAGACA

Downstream 100 bases:

>100_bases
TAAACTGAAGGTCTATTCCTTGAAGGAATTTCAGCTCACTGGAAAATAACAGCAAGCGGAGGAAATCAAGCATGAAATTG
ATAGAGTTGGCTAAACAAAT

Product: cytoplasmic protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 96; Mature: 96

Protein sequence:

>96_residues
MKMKTKVTPTKRELAQYKALIDVGLTANAVAVRLERDPKTVRKYLRSDVYRDPEIKAMVDKIKKKEIAYLYFLGSKSRQQ
QRERFTDGGASRAAFT

Sequences:

>Translated_96_residues
MKMKTKVTPTKRELAQYKALIDVGLTANAVAVRLERDPKTVRKYLRSDVYRDPEIKAMVDKIKKKEIAYLYFLGSKSRQQ
QRERFTDGGASRAAFT
>Mature_96_residues
MKMKTKVTPTKRELAQYKALIDVGLTANAVAVRLERDPKTVRKYLRSDVYRDPEIKAMVDKIKKKEIAYLYFLGSKSRQQ
QRERFTDGGASRAAFT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11085; Mature: 11085

Theoretical pI: Translated: 10.81; Mature: 10.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKMKTKVTPTKRELAQYKALIDVGLTANAVAVRLERDPKTVRKYLRSDVYRDPEIKAMVD
CCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHHCCCCCHHHHHHH
KIKKKEIAYLYFLGSKSRQQQRERFTDGGASRAAFT
HHHHHHEEEEEEECCCHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MKMKTKVTPTKRELAQYKALIDVGLTANAVAVRLERDPKTVRKYLRSDVYRDPEIKAMVD
CCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHHCCCCCHHHHHHH
KIKKKEIAYLYFLGSKSRQQQRERFTDGGASRAAFT
HHHHHHEEEEEEECCCHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA