| Definition | Syntrophus aciditrophicus SB chromosome, complete genome. |
|---|---|
| Accession | NC_007759 |
| Length | 3,179,300 |
Click here to switch to the map view.
The map label for this gene is 85860143
Identifier: 85860143
GI number: 85860143
Start: 2350414
End: 2350578
Strand: Direct
Name: 85860143
Synonym: SYN_03719
Alternate gene names: NA
Gene position: 2350414-2350578 (Clockwise)
Preceding gene: 85860142
Following gene: 85860145
Centisome position: 73.93
GC content: 57.58
Gene sequence:
>165_bases ATGAAAAACGGGCTGATTCCCCTTCCATGTCACCAGGACGCGATCATCGTCGGATCCGCAGCCGGCATCTCGGCCGTCGC TCCGGGCAGGCCTGCGTTGTCTCTGTCTTTCCGCCTCGATATCGCCTCTGATCCGGAACTGGAATTCCATGCCCTATACA TATGA
Upstream 100 bases:
>100_bases CTTCCGGCTGACCGCAGGCGGCGATTCCGATCAGAATGGCTGCAATCAGAAAAAGCCCCGCTGAAATTCTCCAACCTCTG AACATCAATAAATCCTCCAG
Downstream 100 bases:
>100_bases CAACGGCCTTCTACATCCGCCGGATTTTTTCGTCAAGTCCGGGAAAATTTTTTAATTTTGCCTGCCCGGATTATCGCGCG ATCCTGTATGGCCATCGTAT
Product: cytoplasmic protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 54; Mature: 54
Protein sequence:
>54_residues MKNGLIPLPCHQDAIIVGSAAGISAVAPGRPALSLSFRLDIASDPELEFHALYI
Sequences:
>Translated_54_residues MKNGLIPLPCHQDAIIVGSAAGISAVAPGRPALSLSFRLDIASDPELEFHALYI >Mature_54_residues MKNGLIPLPCHQDAIIVGSAAGISAVAPGRPALSLSFRLDIASDPELEFHALYI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 5658; Mature: 5658
Theoretical pI: Translated: 5.47; Mature: 5.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNGLIPLPCHQDAIIVGSAAGISAVAPGRPALSLSFRLDIASDPELEFHALYI CCCCCCCCCCCCCEEEEECCCCCEEECCCCCEEEEEEEEEECCCCCCEEEEEEC >Mature Secondary Structure MKNGLIPLPCHQDAIIVGSAAGISAVAPGRPALSLSFRLDIASDPELEFHALYI CCCCCCCCCCCCCEEEEECCCCCEEECCCCCEEEEEEEEEECCCCCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA