Definition Syntrophus aciditrophicus SB chromosome, complete genome.
Accession NC_007759
Length 3,179,300

Click here to switch to the map view.

The map label for this gene is 85860145

Identifier: 85860145

GI number: 85860145

Start: 2350575

End: 2350790

Strand: Direct

Name: 85860145

Synonym: SYN_00793

Alternate gene names: NA

Gene position: 2350575-2350790 (Clockwise)

Preceding gene: 85860143

Following gene: 85860146

Centisome position: 73.93

GC content: 47.69

Gene sequence:

>216_bases
ATGACAACGGCCTTCTACATCCGCCGGATTTTTTCGTCAAGTCCGGGAAAATTTTTTAATTTTGCCTGCCCGGATTATCG
CGCGATCCTGTATGGCCATCGTATTGTTCCGGTTGCAGCTCCGGTGAAATCCATGTTATGGACAGAAAAAGTTCAGGAGG
TTGCTCCATCATGTTCAAGTCCGGTTTCATCGGAATCATCGGCAGACCCAATGTAG

Upstream 100 bases:

>100_bases
CCGGCATCTCGGCCGTCGCTCCGGGCAGGCCTGCGTTGTCTCTGTCTTTCCGCCTCGATATCGCCTCTGATCCGGAACTG
GAATTCCATGCCCTATACAT

Downstream 100 bases:

>100_bases
GAAAATCAACACTTCTCAACGGTATTCTGGGCGAGAAACTGGCCATCATCACCCACAAGCCCCAAACCACACGGAATCGG
ATCATGGGGATAAGAAACGC

Product: cytoplasmic protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 71; Mature: 70

Protein sequence:

>71_residues
MTTAFYIRRIFSSSPGKFFNFACPDYRAILYGHRIVPVAAPVKSMLWTEKVQEVAPSCSSPVSSESSADPM

Sequences:

>Translated_71_residues
MTTAFYIRRIFSSSPGKFFNFACPDYRAILYGHRIVPVAAPVKSMLWTEKVQEVAPSCSSPVSSESSADPM
>Mature_70_residues
TTAFYIRRIFSSSPGKFFNFACPDYRAILYGHRIVPVAAPVKSMLWTEKVQEVAPSCSSPVSSESSADPM

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 7862; Mature: 7731

Theoretical pI: Translated: 8.74; Mature: 8.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
7.0 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTAFYIRRIFSSSPGKFFNFACPDYRAILYGHRIVPVAAPVKSMLWTEKVQEVAPSCSS
CCHHHHHHHHHCCCCCCEEECCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCC
PVSSESSADPM
CCCCCCCCCCC
>Mature Secondary Structure 
TTAFYIRRIFSSSPGKFFNFACPDYRAILYGHRIVPVAAPVKSMLWTEKVQEVAPSCSS
CHHHHHHHHHCCCCCCEEECCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCC
PVSSESSADPM
CCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA