| Definition | Syntrophus aciditrophicus SB chromosome, complete genome. |
|---|---|
| Accession | NC_007759 |
| Length | 3,179,300 |
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The map label for this gene is 85860117
Identifier: 85860117
GI number: 85860117
Start: 2324970
End: 2326163
Strand: Direct
Name: 85860117
Synonym: SYN_00820
Alternate gene names: NA
Gene position: 2324970-2326163 (Clockwise)
Preceding gene: 85860116
Following gene: 85860118
Centisome position: 73.13
GC content: 41.12
Gene sequence:
>1194_bases TTGAGAACCAAAATTGGCATATACCTTAGTTCTGAACCGGAATCAGGGGGGATGTTTCAGTATGGTCTTTCAATATTGGA TGCCGCGGCTTCCTTGCCGAGAGACCGCTACCAAACAACTGTTGCTTTCATTTCAGAACGTTGGAATGAGCATCTTAAAT TCCGGAACCTTGAGCATTTTCAGATATCGCCAAACTTCTTATGGCGTATCTTTAAAGGAAAGGGGTGGCTTCTTTTAAAT CTTCCGATTTCCTTTTGGCGATGGATCTTAATAAATCTCAATCCTTTTTTTTACAAACGCCTGATTCAAGAAGGTTGTGA TTTATGGCTATTCCCTTCACAAGATACATGGACTTACTTGCTTCGATTAAATTCTTTGGGGGTTGTTCATGACCTGATGC ATCGATATGAGAAAAAATTTTCAGAGGTTGCTGCTCCGTTTGAATATCGCCGCAGGGAAAGGCACTATCGGGCAATGTGT GAATATTCCAAAGGTATCCTTGTCGACTCCAATTATGGGAAAAGACAGGTTTTGGAATCTTATGATGCTAAGCCAGATTT TATCCATGTTCTTCCTTACGTCCCCCCCGAATATATAAATATAAAAAATGCTCCTATAGACTTCGACTCAAGATATAACC TCCCTCGCAAATTTCTTTTTTACCCGGCTCAGTTCTGGGAACATAAAAACCATCACAATTTACTTGCCGCTTTAGCCCAT TTAAAACGCGAGTTAAGAGATATCCATGTCGTATTGGTTGGATCAAAAAAAAATGCCTATAAAAAAACGCTGGGATATAT TAATTCGATGAATCTTTCCGATCATGTGATCATCCTTGGTTATGTTCCAAATGAAGACATGGCCGAATTTTATCGCCGGG CACGTGCACTCGTTTTTCCGTCATTTTTCGGGCCAACCAATATTCCCCCGTTAGAAGCATGCGCCGCGGGTTGCCCTCTT GCCGTTTCAAATATCTACGGAATGCCGGAACAATTAGGAGACGCTGCCCTGTTTTTCAATCCGCATTCGGTTGAAGAAAT CCATTTGGCCATGAAAAGATTATGGATTGACGACGCTTTATGCAGGCAGCTAAGCATGAACGGAAAAAAATGGGCAAAAG CATGGAATCAAAACTCATTCAACAGGCAATTCCAAGTCATTATTGAGGAAGTATTGAAGAACCCTAATACATGA
Upstream 100 bases:
>100_bases TAGGAAAGCAGCAGACCTTGATGATTGGATCAATAGAAATTTCTCCTGCATCCAGTAAATCGATTTACCATTCATAAATG ATCAGGGGAGAGCAAAACTA
Downstream 100 bases:
>100_bases AACTAGATTCTCTCTTCTTCAGCATTATCACCGCTTCGCTTAATTGCGTCGATACGATTCGGGAAACGATAGATTCTGTT GCAGAGCAGACATTCCCTTA
Product: mannosyltransferase
Products: NA
Alternate protein names: Mannosyltransferase; Glycosyltransferase; Glycosyl Transferase Group 1 Family Protein; Glycosyl Transferase; Mannosyltransferase B; Mannosyl Transferase; Group Glycosyltransferase; Glycosyl Transferase Group 1 Protein; Glycosyltransferase Group 1 Family Protein; Glycosyltransferase Protein; A-Glycosyltransferase Glycosyltransferase Family 4 Protein; Mannosyl Transferase B; Glycosyl Transferase Family Protein; Glycosyl Transferases Group 1 Protein
Number of amino acids: Translated: 397; Mature: 397
Protein sequence:
>397_residues MRTKIGIYLSSEPESGGMFQYGLSILDAAASLPRDRYQTTVAFISERWNEHLKFRNLEHFQISPNFLWRIFKGKGWLLLN LPISFWRWILINLNPFFYKRLIQEGCDLWLFPSQDTWTYLLRLNSLGVVHDLMHRYEKKFSEVAAPFEYRRRERHYRAMC EYSKGILVDSNYGKRQVLESYDAKPDFIHVLPYVPPEYINIKNAPIDFDSRYNLPRKFLFYPAQFWEHKNHHNLLAALAH LKRELRDIHVVLVGSKKNAYKKTLGYINSMNLSDHVIILGYVPNEDMAEFYRRARALVFPSFFGPTNIPPLEACAAGCPL AVSNIYGMPEQLGDAALFFNPHSVEEIHLAMKRLWIDDALCRQLSMNGKKWAKAWNQNSFNRQFQVIIEEVLKNPNT
Sequences:
>Translated_397_residues MRTKIGIYLSSEPESGGMFQYGLSILDAAASLPRDRYQTTVAFISERWNEHLKFRNLEHFQISPNFLWRIFKGKGWLLLN LPISFWRWILINLNPFFYKRLIQEGCDLWLFPSQDTWTYLLRLNSLGVVHDLMHRYEKKFSEVAAPFEYRRRERHYRAMC EYSKGILVDSNYGKRQVLESYDAKPDFIHVLPYVPPEYINIKNAPIDFDSRYNLPRKFLFYPAQFWEHKNHHNLLAALAH LKRELRDIHVVLVGSKKNAYKKTLGYINSMNLSDHVIILGYVPNEDMAEFYRRARALVFPSFFGPTNIPPLEACAAGCPL AVSNIYGMPEQLGDAALFFNPHSVEEIHLAMKRLWIDDALCRQLSMNGKKWAKAWNQNSFNRQFQVIIEEVLKNPNT >Mature_397_residues MRTKIGIYLSSEPESGGMFQYGLSILDAAASLPRDRYQTTVAFISERWNEHLKFRNLEHFQISPNFLWRIFKGKGWLLLN LPISFWRWILINLNPFFYKRLIQEGCDLWLFPSQDTWTYLLRLNSLGVVHDLMHRYEKKFSEVAAPFEYRRRERHYRAMC EYSKGILVDSNYGKRQVLESYDAKPDFIHVLPYVPPEYINIKNAPIDFDSRYNLPRKFLFYPAQFWEHKNHHNLLAALAH LKRELRDIHVVLVGSKKNAYKKTLGYINSMNLSDHVIILGYVPNEDMAEFYRRARALVFPSFFGPTNIPPLEACAAGCPL AVSNIYGMPEQLGDAALFFNPHSVEEIHLAMKRLWIDDALCRQLSMNGKKWAKAWNQNSFNRQFQVIIEEVLKNPNT
Specific function: Unknown
COG id: COG0438
COG function: function code M; Glycosyltransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46647; Mature: 46647
Theoretical pI: Translated: 9.45; Mature: 9.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRTKIGIYLSSEPESGGMFQYGLSILDAAASLPRDRYQTTVAFISERWNEHLKFRNLEHF CCCEEEEEEECCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCEE QISPNFLWRIFKGKGWLLLNLPISFWRWILINLNPFFYKRLIQEGCDLWLFPSQDTWTYL EECHHHEEEEECCCCEEEEECCHHHEEEEHCCCCHHHHHHHHHCCCCEEEECCCCCEEEE LRLNSLGVVHDLMHRYEKKFSEVAAPFEYRRRERHYRAMCEYSKGILVDSNYGKRQVLES EEECCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCEEEECCCCHHHHHHH YDAKPDFIHVLPYVPPEYINIKNAPIDFDSRYNLPRKFLFYPAQFWEHKNHHNLLAALAH CCCCCCEEEECCCCCCCCEECCCCCCCCCCCCCCCHHHEECCHHHHCCCCCHHHHHHHHH LKRELRDIHVVLVGSKKNAYKKTLGYINSMNLSDHVIILGYVPNEDMAEFYRRARALVFP HHHHHCEEEEEEEECCCHHHHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHHHHHHHHCC SFFGPTNIPPLEACAAGCPLAVSNIYGMPEQLGDAALFFNPHSVEEIHLAMKRLWIDDAL CCCCCCCCCHHHHHHCCCCHHHHHHCCCHHHHCCEEEEECCCCHHHHHHHHHHHHHHHHH CRQLSMNGKKWAKAWNQNSFNRQFQVIIEEVLKNPNT HHHHCCCCHHHHHHHCCCCCHHHHHHHHHHHHCCCCC >Mature Secondary Structure MRTKIGIYLSSEPESGGMFQYGLSILDAAASLPRDRYQTTVAFISERWNEHLKFRNLEHF CCCEEEEEEECCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCEE QISPNFLWRIFKGKGWLLLNLPISFWRWILINLNPFFYKRLIQEGCDLWLFPSQDTWTYL EECHHHEEEEECCCCEEEEECCHHHEEEEHCCCCHHHHHHHHHCCCCEEEECCCCCEEEE LRLNSLGVVHDLMHRYEKKFSEVAAPFEYRRRERHYRAMCEYSKGILVDSNYGKRQVLES EEECCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCEEEECCCCHHHHHHH YDAKPDFIHVLPYVPPEYINIKNAPIDFDSRYNLPRKFLFYPAQFWEHKNHHNLLAALAH CCCCCCEEEECCCCCCCCEECCCCCCCCCCCCCCCHHHEECCHHHHCCCCCHHHHHHHHH LKRELRDIHVVLVGSKKNAYKKTLGYINSMNLSDHVIILGYVPNEDMAEFYRRARALVFP HHHHHCEEEEEEEECCCHHHHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHHHHHHHHCC SFFGPTNIPPLEACAAGCPLAVSNIYGMPEQLGDAALFFNPHSVEEIHLAMKRLWIDDAL CCCCCCCCCHHHHHHCCCCHHHHHHCCCHHHHCCEEEEECCCCHHHHHHHHHHHHHHHHH CRQLSMNGKKWAKAWNQNSFNRQFQVIIEEVLKNPNT HHHHCCCCHHHHHHHCCCCCHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA