Definition Syntrophus aciditrophicus SB chromosome, complete genome.
Accession NC_007759
Length 3,179,300

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The map label for this gene is wcaE [C]

Identifier: 85860118

GI number: 85860118

Start: 2326160

End: 2326954

Strand: Direct

Name: wcaE [C]

Synonym: SYN_00819

Alternate gene names: 85860118

Gene position: 2326160-2326954 (Clockwise)

Preceding gene: 85860117

Following gene: 85860119

Centisome position: 73.17

GC content: 40.5

Gene sequence:

>795_bases
ATGAAACTAGATTCTCTCTTCTTCAGCATTATCACCGCTTCGCTTAATTGCGTCGATACGATTCGGGAAACGATAGATTC
TGTTGCAGAGCAGACATTCCCTTATGTAGAGCATATCGTCATTGATGGGGGATCAACGGACGGCACGGTGGATGTAATTC
AGGATGCTACTCTGCACAATCAAAGTCATAAAATCTATTGCTTTTCCGAAAGTGATGAAGGCATCGCTGATGCTCTAAAC
AAAGGATTATACAAGGCAAAGGGAAAATATATTCTTGTACTGCAGGCAGACGACAGGCTTATCGACCATGACATTCTTAA
AAAGGTCTATGCTGTAATTGGCGATGAAACTTACGACATCGTCAGTTTCCCGGTTTTGAAAATGAACAGTAACGGGAAAA
GAATTCCTTTCAATCCCATAAAGTTACCTTGGTGGTATCATTTTAAAACCGTATTTCCGCATCAGGGAGCGTTTGTTCAC
AGCAGGCTATTTGAACAAACAGGAAGCTTTAAAAAAGAATTGACGATTGCTCTGGATTACGATTTCTTTTATCGGGCGCT
GGATTCGACAGGTTGTTCTGTACTGATTCAGTCAATGCCAGTTGCTGTCTCAGGTTGTGATGGTATCAGCAGTAATCCAA
ACTATCTTAAGAAAAGACTCCTGGAAGAATGTCTGATCCAGGAAACGAACGAGAAAAAGCTCAGATGGAAAATAATGCAG
AGGATATTCAGAAGAATATATGTCCCCTACAAACTGTTCTCAACCGGTTTAAAGGTACACTTCCTTTTAAAATAA

Upstream 100 bases:

>100_bases
TAAGCATGAACGGAAAAAAATGGGCAAAAGCATGGAATCAAAACTCATTCAACAGGCAATTCCAAGTCATTATTGAGGAA
GTATTGAAGAACCCTAATAC

Downstream 100 bases:

>100_bases
AATTTTTATGATTCTCAGCCCTATGCCCACAGGTAACGGCGCCTTTGTCCTGCACAAAATAATCGAAGCAGGCATTAAAG
GGTACCGCGTTCTCCCTTAC

Product: cell wall biogenesis glycosyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 264; Mature: 264

Protein sequence:

>264_residues
MKLDSLFFSIITASLNCVDTIRETIDSVAEQTFPYVEHIVIDGGSTDGTVDVIQDATLHNQSHKIYCFSESDEGIADALN
KGLYKAKGKYILVLQADDRLIDHDILKKVYAVIGDETYDIVSFPVLKMNSNGKRIPFNPIKLPWWYHFKTVFPHQGAFVH
SRLFEQTGSFKKELTIALDYDFFYRALDSTGCSVLIQSMPVAVSGCDGISSNPNYLKKRLLEECLIQETNEKKLRWKIMQ
RIFRRIYVPYKLFSTGLKVHFLLK

Sequences:

>Translated_264_residues
MKLDSLFFSIITASLNCVDTIRETIDSVAEQTFPYVEHIVIDGGSTDGTVDVIQDATLHNQSHKIYCFSESDEGIADALN
KGLYKAKGKYILVLQADDRLIDHDILKKVYAVIGDETYDIVSFPVLKMNSNGKRIPFNPIKLPWWYHFKTVFPHQGAFVH
SRLFEQTGSFKKELTIALDYDFFYRALDSTGCSVLIQSMPVAVSGCDGISSNPNYLKKRLLEECLIQETNEKKLRWKIMQ
RIFRRIYVPYKLFSTGLKVHFLLK
>Mature_264_residues
MKLDSLFFSIITASLNCVDTIRETIDSVAEQTFPYVEHIVIDGGSTDGTVDVIQDATLHNQSHKIYCFSESDEGIADALN
KGLYKAKGKYILVLQADDRLIDHDILKKVYAVIGDETYDIVSFPVLKMNSNGKRIPFNPIKLPWWYHFKTVFPHQGAFVH
SRLFEQTGSFKKELTIALDYDFFYRALDSTGCSVLIQSMPVAVSGCDGISSNPNYLKKRLLEECLIQETNEKKLRWKIMQ
RIFRRIYVPYKLFSTGLKVHFLLK

Specific function: Involved in glycosylation steps downstream of mono-O- methyl-glycosyl-p-hydroxybenzoic acid derivative (p-HBAD I) and 2- O-methyl-rhamnosyl-phenolphthiocerol dimycocerosate (mycoside B) during the p-hydroxybenzoic acid derivatives (p-HBAD) and glycosylate

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 2 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: NA

Molecular weight: Translated: 30250; Mature: 30250

Theoretical pI: Translated: 7.91; Mature: 7.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLDSLFFSIITASLNCVDTIRETIDSVAEQTFPYVEHIVIDGGSTDGTVDVIQDATLHN
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCHHHHHHHHCCC
QSHKIYCFSESDEGIADALNKGLYKAKGKYILVLQADDRLIDHDILKKVYAVIGDETYDI
CCCEEEEECCCCCCHHHHHHCCHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHCCCCEEE
VSFPVLKMNSNGKRIPFNPIKLPWWYHFKTVFPHQGAFVHSRLFEQTGSFKKELTIALDY
EECEEEEECCCCCCCCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHCCCCEEEEEEEEH
DFFYRALDSTGCSVLIQSMPVAVSGCDGISSNPNYLKKRLLEECLIQETNEKKLRWKIMQ
HHHHHHHCCCCHHHHHHHCCEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHH
RIFRRIYVPYKLFSTGLKVHFLLK
HHHHHHHCCHHHHHCCCEEEEEEC
>Mature Secondary Structure
MKLDSLFFSIITASLNCVDTIRETIDSVAEQTFPYVEHIVIDGGSTDGTVDVIQDATLHN
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCHHHHHHHHCCC
QSHKIYCFSESDEGIADALNKGLYKAKGKYILVLQADDRLIDHDILKKVYAVIGDETYDI
CCCEEEEECCCCCCHHHHHHCCHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHCCCCEEE
VSFPVLKMNSNGKRIPFNPIKLPWWYHFKTVFPHQGAFVHSRLFEQTGSFKKELTIALDY
EECEEEEECCCCCCCCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHCCCCEEEEEEEEH
DFFYRALDSTGCSVLIQSMPVAVSGCDGISSNPNYLKKRLLEECLIQETNEKKLRWKIMQ
HHHHHHHCCCCHHHHHHHCCEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHH
RIFRRIYVPYKLFSTGLKVHFLLK
HHHHHHHCCHHHHHCCCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12788972 [H]