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The map label for this gene is ycdQ [C]

Identifier: 85860116

GI number: 85860116

Start: 2323929

End: 2324927

Strand: Direct

Name: ycdQ [C]

Synonym: SYN_00821

Alternate gene names: 85860116

Gene position: 2323929-2324927 (Clockwise)

Preceding gene: 85860115

Following gene: 85860117

Centisome position: 73.1

GC content: 41.44

Gene sequence:

>999_bases
ATGGGCTATTCCTCTTTCATATCGATTATAATCCCAACCTACAACCGGGCACAGATGCTGCCGTTGACTCTGGACAGTTT
TCTTGCCCAAGATTACCCGAGTGACCGTTATGAAATCATCGTGGTGGACAACAATTCAACTGATGAAACACCGGAGATCG
CAGCGCGATATGTCGACAACTCGACTGTATCTGTTAAATACTACTTTGAACAGCGTCAGGGCGTTCACTATGCGCGGAAC
AGCGCAGCAAAACAGGCCAGAGGTGACATCTTATACTTTACTGACGATGATATGATTGCTGATCGAGCACTGTTGAGTGA
ATTGGTCAGGGTATTCGACCTGTTTCCTGAAGTCGGTTGTGCCACCGGTCTCATTCTTCCTCTGTTCGAAAAAGAACCGC
CGGTCTGGGTTACTCGTTATCTGTGGAATCACTATCTCAGCTTAACGGAAAAGGATAGGCCGGAGGAATTGATCGTCTCA
AGAAATGATCTGGTGTACAGTTGTCACCAGGCTATTCGCCGGGCCGTCTTCTTCCAGACAGGCGGATTTAATCCTGAAAA
TACGGCCGGTACCTGGATCGGTGATGGGGAAACAGGCTTAAATATTAAAATAAAAAGCTTAGGCTATAAATTTGCGTACA
GCTCCAAATCAGTTATTTATCACATGATTCCTCAAAACAGGACAACCCTCAAATACCTGATCAAAAGGATTGGAAACCAA
GGATTTTGTGATTCTTATACTGATTACAGGAAACATAAAGATAGATCTAAAATTATTCCATCAATGCTCAGAAGGAATAC
AATCGATCTTGTAAAAATTTTATGTGTCACACTTGTAAAAATAGCCATGGGTAACCTTTCATGGCATTTTATACCTGCCA
AAATCATGTATTTTCACAAAAGAAATGTTTATGATTTGAAATTATATAAAAATGAGCGTTTTAGGAAAGCAGCAGACCTT
GATGATTGGATCAATAGAAATTTCTCCTGCATCCAGTAA

Upstream 100 bases:

>100_bases
AAAGCAAAAGACATATTATCAAATATATCTGACCATTCTCGATACTTATTTAAAAACCACAAAATTTTTTAACAACCTTC
TGATCCCACGAAAGCAATAG

Downstream 100 bases:

>100_bases
ATCGATTTACCATTCATAAATGATCAGGGGAGAGCAAAACTATTGAGAACCAAAATTGGCATATACCTTAGTTCTGAACC
GGAATCAGGGGGGATGTTTC

Product: glycosyltransferase

Products: NA

Alternate protein names: Glycosyltransferase; Family 2 Glycosyl Transferase; Glycosyl Transferase Group 2 Family Protein; Glycosyl Transferase; Glycosyl Transferase Family 2 Protein; Glycosyltransferase Protein; Glycoside Hydrolase Family 2 Protein; Family 2 Glycosyltransferase; Family Glycosyltransferase; Glycosyltransferase AglE; Rhamnosyl Transferase; Glycosyltransferase Involved In Cell Wall Biogenesis; Glucosaminyltransferase; Glucosyltransferase; Sugar Transferase; UDP-Hexose Transferase; Sugar Transferase-Like Protein; B-Glycosyltransferase; Succinoglycan Biosynthesis Protein; Cell Wall Biosynthesis Glycosyltransferase-Like Protein; Dolichyl-Phosphate Mannose Synthase Related Protein; Glycosyltransferase AglI; N-Glycosyltransferase; Arylsulfatase; Dolichyl-Phosphate Mannose Synthase-Like Protein; Glycosyl Transferase CpsO; Biofilm PIA Synthesis N-Glycosyltransferase IcaA

Number of amino acids: Translated: 332; Mature: 331

Protein sequence:

>332_residues
MGYSSFISIIIPTYNRAQMLPLTLDSFLAQDYPSDRYEIIVVDNNSTDETPEIAARYVDNSTVSVKYYFEQRQGVHYARN
SAAKQARGDILYFTDDDMIADRALLSELVRVFDLFPEVGCATGLILPLFEKEPPVWVTRYLWNHYLSLTEKDRPEELIVS
RNDLVYSCHQAIRRAVFFQTGGFNPENTAGTWIGDGETGLNIKIKSLGYKFAYSSKSVIYHMIPQNRTTLKYLIKRIGNQ
GFCDSYTDYRKHKDRSKIIPSMLRRNTIDLVKILCVTLVKIAMGNLSWHFIPAKIMYFHKRNVYDLKLYKNERFRKAADL
DDWINRNFSCIQ

Sequences:

>Translated_332_residues
MGYSSFISIIIPTYNRAQMLPLTLDSFLAQDYPSDRYEIIVVDNNSTDETPEIAARYVDNSTVSVKYYFEQRQGVHYARN
SAAKQARGDILYFTDDDMIADRALLSELVRVFDLFPEVGCATGLILPLFEKEPPVWVTRYLWNHYLSLTEKDRPEELIVS
RNDLVYSCHQAIRRAVFFQTGGFNPENTAGTWIGDGETGLNIKIKSLGYKFAYSSKSVIYHMIPQNRTTLKYLIKRIGNQ
GFCDSYTDYRKHKDRSKIIPSMLRRNTIDLVKILCVTLVKIAMGNLSWHFIPAKIMYFHKRNVYDLKLYKNERFRKAADL
DDWINRNFSCIQ
>Mature_331_residues
GYSSFISIIIPTYNRAQMLPLTLDSFLAQDYPSDRYEIIVVDNNSTDETPEIAARYVDNSTVSVKYYFEQRQGVHYARNS
AAKQARGDILYFTDDDMIADRALLSELVRVFDLFPEVGCATGLILPLFEKEPPVWVTRYLWNHYLSLTEKDRPEELIVSR
NDLVYSCHQAIRRAVFFQTGGFNPENTAGTWIGDGETGLNIKIKSLGYKFAYSSKSVIYHMIPQNRTTLKYLIKRIGNQG
FCDSYTDYRKHKDRSKIIPSMLRRNTIDLVKILCVTLVKIAMGNLSWHFIPAKIMYFHKRNVYDLKLYKNERFRKAADLD
DWINRNFSCIQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Integral Membrane Protein [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 38609; Mature: 38477

Theoretical pI: Translated: 8.95; Mature: 8.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGYSSFISIIIPTYNRAQMLPLTLDSFLAQDYPSDRYEIIVVDNNSTDETPEIAARYVDN
CCHHHEEEEEECCCCCCEEEEEEHHHHHHHCCCCCCEEEEEEECCCCCCCHHHHHHHCCC
STVSVKYYFEQRQGVHYARNSAAKQARGDILYFTDDDMIADRALLSELVRVFDLFPEVGC
CEEEEEEEEECCCCCHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHH
ATGLILPLFEKEPPVWVTRYLWNHYLSLTEKDRPEELIVSRNDLVYSCHQAIRRAVFFQT
HHCCEEEEECCCCCHHHHHHHHHHHHHCCCCCCCHHHEECCCHHHHHHHHHHHHHHHHCC
GGFNPENTAGTWIGDGETGLNIKIKSLGYKFAYSSKSVIYHMIPQNRTTLKYLIKRIGNQ
CCCCCCCCCCCEECCCCCCCEEEEEECCEEEEECCCCEEEEECCCCCHHHHHHHHHHCCC
GFCDSYTDYRKHKDRSKIIPSMLRRNTIDLVKILCVTLVKIAMGNLSWHFIPAKIMYFHK
CCCCCHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCEEEEEHHEEEEEEC
RNVYDLKLYKNERFRKAADLDDWINRNFSCIQ
CCEEEEEEECCCHHHHHCCCHHHHCCCCCCCC
>Mature Secondary Structure 
GYSSFISIIIPTYNRAQMLPLTLDSFLAQDYPSDRYEIIVVDNNSTDETPEIAARYVDN
CHHHEEEEEECCCCCCEEEEEEHHHHHHHCCCCCCEEEEEEECCCCCCCHHHHHHHCCC
STVSVKYYFEQRQGVHYARNSAAKQARGDILYFTDDDMIADRALLSELVRVFDLFPEVGC
CEEEEEEEEECCCCCHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHH
ATGLILPLFEKEPPVWVTRYLWNHYLSLTEKDRPEELIVSRNDLVYSCHQAIRRAVFFQT
HHCCEEEEECCCCCHHHHHHHHHHHHHCCCCCCCHHHEECCCHHHHHHHHHHHHHHHHCC
GGFNPENTAGTWIGDGETGLNIKIKSLGYKFAYSSKSVIYHMIPQNRTTLKYLIKRIGNQ
CCCCCCCCCCCEECCCCCCCEEEEEECCEEEEECCCCEEEEECCCCCHHHHHHHHHHCCC
GFCDSYTDYRKHKDRSKIIPSMLRRNTIDLVKILCVTLVKIAMGNLSWHFIPAKIMYFHK
CCCCCHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCEEEEEHHEEEEEEC
RNVYDLKLYKNERFRKAADLDDWINRNFSCIQ
CCEEEEEEECCCHHHHHCCCHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA