| Definition | Syntrophus aciditrophicus SB chromosome, complete genome. |
|---|---|
| Accession | NC_007759 |
| Length | 3,179,300 |
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The map label for this gene is 85860077
Identifier: 85860077
GI number: 85860077
Start: 2286151
End: 2286588
Strand: Direct
Name: 85860077
Synonym: SYN_03707
Alternate gene names: NA
Gene position: 2286151-2286588 (Clockwise)
Preceding gene: 85860076
Following gene: 85860078
Centisome position: 71.91
GC content: 54.11
Gene sequence:
>438_bases GTGAGCTTGAAATCCGTGATGAGCCTGCTGAAGATCTGGAGTGAAGCCGGTCAGACCATGATGAAAACGGAAAAAAGACA AAAGGGGTTTACCCTGATAGAGATGATGATCGCTTTGACGGTCCTGGCTCTCGTCGTTGCGGCGGTTTCCCACGCTTTGG CACAGAGCCTCGCCATGGCTCACCGGATCAAAAAGGATACAACGCTGTCTCTGCTGGCACAGAGCAAAATGGCGGAGATC GAGGCGGCAAAGGAAGGCGCCGCTTCGGATCATGGAAATTTCGGCGGCAACTTTTCCCAATATGGGTGGCAGGTTTCCGT CCGGGGAAGCGGCATCTCGACCCTGAAGAAGGTGGAGGTGACGGTTTTGGATACCCTTTCGGAAAAACGCGAAAGTTTCC GTCTCACCAGCCTCCAGTACAGGGAGGAATCCCCATGA
Upstream 100 bases:
>100_bases GCCACCGTCCTTTTGTCCGGACAGGGGTACGCTCAACCGGCCGTTATCCATCTCCGCCGGGATGACTGTGCCGTAAGTCT GACCATCAGCCCCTTCCTGA
Downstream 100 bases:
>100_bases GGCATCCTCCGGAAACAAGTAAAAACGGCGGAGAGGCGGGGTTCACGCTCTTCGAGATTCTAGTCGCACTTTTTATCCTT ACGCTTATTTTTTCCGTCCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 145; Mature: 144
Protein sequence:
>145_residues MSLKSVMSLLKIWSEAGQTMMKTEKRQKGFTLIEMMIALTVLALVVAAVSHALAQSLAMAHRIKKDTTLSLLAQSKMAEI EAAKEGAASDHGNFGGNFSQYGWQVSVRGSGISTLKKVEVTVLDTLSEKRESFRLTSLQYREESP
Sequences:
>Translated_145_residues MSLKSVMSLLKIWSEAGQTMMKTEKRQKGFTLIEMMIALTVLALVVAAVSHALAQSLAMAHRIKKDTTLSLLAQSKMAEI EAAKEGAASDHGNFGGNFSQYGWQVSVRGSGISTLKKVEVTVLDTLSEKRESFRLTSLQYREESP >Mature_144_residues SLKSVMSLLKIWSEAGQTMMKTEKRQKGFTLIEMMIALTVLALVVAAVSHALAQSLAMAHRIKKDTTLSLLAQSKMAEIE AAKEGAASDHGNFGGNFSQYGWQVSVRGSGISTLKKVEVTVLDTLSEKRESFRLTSLQYREESP
Specific function: Unknown
COG id: COG2165
COG function: function code NU; Type II secretory pathway, pseudopilin PulG
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15895; Mature: 15763
Theoretical pI: Translated: 10.10; Mature: 10.10
Prosite motif: PS00409 PROKAR_NTER_METHYL
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 5.5 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.9 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLKSVMSLLKIWSEAGQTMMKTEKRQKGFTLIEMMIALTVLALVVAAVSHALAQSLAMA CCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HRIKKDTTLSLLAQSKMAEIEAAKEGAASDHGNFGGNFSQYGWQVSVRGSGISTLKKVEV HHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHCCEEEECCCCHHHHHHHHH TVLDTLSEKRESFRLTSLQYREESP HHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure SLKSVMSLLKIWSEAGQTMMKTEKRQKGFTLIEMMIALTVLALVVAAVSHALAQSLAMA CHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HRIKKDTTLSLLAQSKMAEIEAAKEGAASDHGNFGGNFSQYGWQVSVRGSGISTLKKVEV HHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHCCEEEECCCCHHHHHHHHH TVLDTLSEKRESFRLTSLQYREESP HHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA