| Definition | Syntrophus aciditrophicus SB chromosome, complete genome. |
|---|---|
| Accession | NC_007759 |
| Length | 3,179,300 |
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The map label for this gene is 85859949
Identifier: 85859949
GI number: 85859949
Start: 2177693
End: 2178268
Strand: Direct
Name: 85859949
Synonym: SYN_03100
Alternate gene names: NA
Gene position: 2177693-2178268 (Clockwise)
Preceding gene: 85859946
Following gene: 85859950
Centisome position: 68.5
GC content: 51.22
Gene sequence:
>576_bases ATGGATACTCTGATCGGAATGGCGATCGGCATCGGTTTGAGCGCCGCGTGCGGCTTCAGAGTCTTTGTCCCGTTGCTGAT CATGAATCTTGCGACATCGAGTGGACAGATTCACCTGTCGCCTGAATTTTCATGGATTGGAAGCCCTTATGCAACGGCAG CTTTCGCGACGGCAACCCTCATCGAAATTCTCTGTTATTACATACCCTGGGTCGATCACATTATCGATACGATCTCAACG CCAGCCGCAGTGATTGCCGGAACCGTCGTTACAGCGTCAACAGCGATCGAATTGTCTCCTTTTTTAAAGTGGACTCTGGC GCTGATTGCCGGTGGAGGAATAGCTGGACTGGTGCAGGGATCAACGGTCGCGCTTCGGGCAAAATCATCGATCTCCACGG GAGGAGCCGCAAATCCCCTGATTTCCACACTGGAGTTGATCGGCGCCATATTGACAGCCCTGCTCGCTGTCCTTGTTCCT GTTCTCTGCCTGATACTCGTCGGCTTTTTTTGTTTTGTTATCTTCCGGAAAGTCGGCCGCCTGATATTCGGAAGAATGAA ATTTCAACAGAGATAA
Upstream 100 bases:
>100_bases GGCTGTCAGGGCTTTGATAAGGGAAATCAGAAGAAAGAGGCAGGCCCCGGACTTTAAAAACGGGGTTTTCCTTCATGGAG AACAGGAAACTGGAAACACC
Downstream 100 bases:
>100_bases CTTGTCGTGAGAAAAGACCAATGTTAAAACAAAACCGGATTCTGATCCTTTATATCATCATCTTTTTTCTTGCCCTGATC CTCTCAGGAATCCATCCAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 191; Mature: 191
Protein sequence:
>191_residues MDTLIGMAIGIGLSAACGFRVFVPLLIMNLATSSGQIHLSPEFSWIGSPYATAAFATATLIEILCYYIPWVDHIIDTIST PAAVIAGTVVTASTAIELSPFLKWTLALIAGGGIAGLVQGSTVALRAKSSISTGGAANPLISTLELIGAILTALLAVLVP VLCLILVGFFCFVIFRKVGRLIFGRMKFQQR
Sequences:
>Translated_191_residues MDTLIGMAIGIGLSAACGFRVFVPLLIMNLATSSGQIHLSPEFSWIGSPYATAAFATATLIEILCYYIPWVDHIIDTIST PAAVIAGTVVTASTAIELSPFLKWTLALIAGGGIAGLVQGSTVALRAKSSISTGGAANPLISTLELIGAILTALLAVLVP VLCLILVGFFCFVIFRKVGRLIFGRMKFQQR >Mature_191_residues MDTLIGMAIGIGLSAACGFRVFVPLLIMNLATSSGQIHLSPEFSWIGSPYATAAFATATLIEILCYYIPWVDHIIDTIST PAAVIAGTVVTASTAIELSPFLKWTLALIAGGGIAGLVQGSTVALRAKSSISTGGAANPLISTLELIGAILTALLAVLVP VLCLILVGFFCFVIFRKVGRLIFGRMKFQQR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20014; Mature: 20014
Theoretical pI: Translated: 8.65; Mature: 8.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDTLIGMAIGIGLSAACGFRVFVPLLIMNLATSSGQIHLSPEFSWIGSPYATAAFATATL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCHHHHHHHHHHH IEILCYYIPWVDHIIDTISTPAAVIAGTVVTASTAIELSPFLKWTLALIAGGGIAGLVQG HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCC STVALRAKSSISTGGAANPLISTLELIGAILTALLAVLVPVLCLILVGFFCFVIFRKVGR CEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LIFGRMKFQQR HHHHHHHHCCC >Mature Secondary Structure MDTLIGMAIGIGLSAACGFRVFVPLLIMNLATSSGQIHLSPEFSWIGSPYATAAFATATL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCHHHHHHHHHHH IEILCYYIPWVDHIIDTISTPAAVIAGTVVTASTAIELSPFLKWTLALIAGGGIAGLVQG HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCC STVALRAKSSISTGGAANPLISTLELIGAILTALLAVLVPVLCLILVGFFCFVIFRKVGR CEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LIFGRMKFQQR HHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA