| Definition | Syntrophus aciditrophicus SB chromosome, complete genome. |
|---|---|
| Accession | NC_007759 |
| Length | 3,179,300 |
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The map label for this gene is 85859940
Identifier: 85859940
GI number: 85859940
Start: 2171791
End: 2172042
Strand: Direct
Name: 85859940
Synonym: SYN_00681
Alternate gene names: NA
Gene position: 2171791-2172042 (Clockwise)
Preceding gene: 85859936
Following gene: 85859944
Centisome position: 68.31
GC content: 44.05
Gene sequence:
>252_bases ATGACGTGCGGGGGAACAATTCTTTCCTCCCGGGAGGGATTCGCCATGAATTATAAAGAATACCTGAAAACATTGATCGG CAGAAGGGGAACACTGGATATGCCCAAAAATGGTCCCCACTACACTCTTCATTTCAATGAATCGGATTCTCGACACAAAA ATGCCCACCTTGTCGATGTGGATGATAATTTTGTGGTCATTCATCATGATGTCTATGGGATACTTAGAATTCCGCTCTCT TCTCTCTGGTAG
Upstream 100 bases:
>100_bases GAAGCTTATCACTTTACCCCCATTGAATGTGACTCGGGAGGTGAATAAAATAGAAACAAAGGAAGGCTGTCCGAGGTAAA CAGAATTAACTCCTGAGAGT
Downstream 100 bases:
>100_bases TTTGTTTCTTTACATTGTGTCATTCTTCGCTTCCAATGGCGCCCCCACCTCCCTTAGATGGAAAGCGGTAACAGCCTGCC CATGAAAAGTTCTAGTGACC
Product: cytoplasmic protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 83; Mature: 82
Protein sequence:
>83_residues MTCGGTILSSREGFAMNYKEYLKTLIGRRGTLDMPKNGPHYTLHFNESDSRHKNAHLVDVDDNFVVIHHDVYGILRIPLS SLW
Sequences:
>Translated_83_residues MTCGGTILSSREGFAMNYKEYLKTLIGRRGTLDMPKNGPHYTLHFNESDSRHKNAHLVDVDDNFVVIHHDVYGILRIPLS SLW >Mature_82_residues TCGGTILSSREGFAMNYKEYLKTLIGRRGTLDMPKNGPHYTLHFNESDSRHKNAHLVDVDDNFVVIHHDVYGILRIPLSS LW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9501; Mature: 9370
Theoretical pI: Translated: 7.77; Mature: 7.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTCGGTILSSREGFAMNYKEYLKTLIGRRGTLDMPKNGPHYTLHFNESDSRHKNAHLVDV CCCCCCEEECCCCCEECHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCCCCCCEEEEC DDNFVVIHHDVYGILRIPLSSLW CCCEEEEECCCEEEEECCHHHCC >Mature Secondary Structure TCGGTILSSREGFAMNYKEYLKTLIGRRGTLDMPKNGPHYTLHFNESDSRHKNAHLVDV CCCCCEEECCCCCEECHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCCCCCCEEEEC DDNFVVIHHDVYGILRIPLSSLW CCCEEEEECCCEEEEECCHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA