Definition Syntrophus aciditrophicus SB chromosome, complete genome.
Accession NC_007759
Length 3,179,300

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The map label for this gene is 85859936

Identifier: 85859936

GI number: 85859936

Start: 2170160

End: 2170480

Strand: Direct

Name: 85859936

Synonym: SYN_03095

Alternate gene names: NA

Gene position: 2170160-2170480 (Clockwise)

Preceding gene: 85859935

Following gene: 85859940

Centisome position: 68.26

GC content: 46.11

Gene sequence:

>321_bases
ATGAAAAATTCAGAAATTTCAGACTGGCTGGATCAGAAGGAAGCTGAAGGCGTCGATGTATCACAGATTGTACTGCCTGA
TGACCTCTCTTATGAAGAAGATCCCGATGAAACAATTTATTATAAGGAAATCAACCCCTGCGGGATCCTCTGCAAAGGCA
ATCATCCATTCTCGACGGTCGAGCGTTTCGGACACTGGTATTTCAGCAGGGGGCAGGACAAGAGAGCCGGAATTCACTCT
TCGGACACTCAGTGGCATTGGAGATTGTTTACAAAGGATAAGGCTCTTGCTGTCGAAACGGCCAGATCACACATCGAATA
A

Upstream 100 bases:

>100_bases
AGCTCTCAGGACGCAAAAAATCCGGCATTTGTCTTTGTGATCCTAAAAAAATGAAAAATATTAATTATTTTGAATCCAGG
ATTTACAAAAGGCAACTCTA

Downstream 100 bases:

>100_bases
ACAGAAAGCGGAATCCGATATCAAGTCCGCCGCGGAATATTCCCCCCGGACCATGCCAGCTTCAGTCCTGCTCAGAACGA
TTCAAATCCTTGATTTATCT

Product: cytoplasmic protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 106; Mature: 106

Protein sequence:

>106_residues
MKNSEISDWLDQKEAEGVDVSQIVLPDDLSYEEDPDETIYYKEINPCGILCKGNHPFSTVERFGHWYFSRGQDKRAGIHS
SDTQWHWRLFTKDKALAVETARSHIE

Sequences:

>Translated_106_residues
MKNSEISDWLDQKEAEGVDVSQIVLPDDLSYEEDPDETIYYKEINPCGILCKGNHPFSTVERFGHWYFSRGQDKRAGIHS
SDTQWHWRLFTKDKALAVETARSHIE
>Mature_106_residues
MKNSEISDWLDQKEAEGVDVSQIVLPDDLSYEEDPDETIYYKEINPCGILCKGNHPFSTVERFGHWYFSRGQDKRAGIHS
SDTQWHWRLFTKDKALAVETARSHIE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12345; Mature: 12345

Theoretical pI: Translated: 4.76; Mature: 4.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNSEISDWLDQKEAEGVDVSQIVLPDDLSYEEDPDETIYYKEINPCGILCKGNHPFSTV
CCCCCHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCEEEEEECCCCEEEEECCCCHHHH
ERFGHWYFSRGQDKRAGIHSSDTQWHWRLFTKDKALAVETARSHIE
HHHHHHHHCCCCCCCCCCCCCCCCEEEEEEECCCEEHHHHHHHHCC
>Mature Secondary Structure
MKNSEISDWLDQKEAEGVDVSQIVLPDDLSYEEDPDETIYYKEINPCGILCKGNHPFSTV
CCCCCHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCEEEEEECCCCEEEEECCCCHHHH
ERFGHWYFSRGQDKRAGIHSSDTQWHWRLFTKDKALAVETARSHIE
HHHHHHHHCCCCCCCCCCCCCCCCEEEEEEECCCEEHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA