| Definition | Syntrophus aciditrophicus SB chromosome, complete genome. |
|---|---|
| Accession | NC_007759 |
| Length | 3,179,300 |
Click here to switch to the map view.
The map label for this gene is 85859935
Identifier: 85859935
GI number: 85859935
Start: 2169587
End: 2169745
Strand: Direct
Name: 85859935
Synonym: SYN_00680
Alternate gene names: NA
Gene position: 2169587-2169745 (Clockwise)
Preceding gene: 85859934
Following gene: 85859936
Centisome position: 68.24
GC content: 42.77
Gene sequence:
>159_bases GTGTTCTTTTTTACAGAAATCAATGCCGTTGCCGTCAATCAGATCGATATAAAACGCACATCATCAGGAATTCTTCAGAT CGTCTTCACAGCGCTTCCTTCTGACATCCCATCACGCCATCAGACTCCCAGGCACATTCGATTTCCAATGGAAATTTAA
Upstream 100 bases:
>100_bases CGTATTGTGCGTTACCCTTCAATTATGTTAGAAATCCAAGTAATTTTTTCCGTTTTTGGAGGCAATGTTTCAAACTGATT TCATAACGATTGCTTCCTGA
Downstream 100 bases:
>100_bases GATTTAAAAAAATTTAAGCGAGGTCAACCATGTCACTTGGTAAATGTCCGGAATGTGGTCATGTTATGAGTACAACGGCT GCATTCTGCGTTCACTGCGG
Product: cytoplasmic protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 52; Mature: 52
Protein sequence:
>52_residues MFFFTEINAVAVNQIDIKRTSSGILQIVFTALPSDIPSRHQTPRHIRFPMEI
Sequences:
>Translated_52_residues MFFFTEINAVAVNQIDIKRTSSGILQIVFTALPSDIPSRHQTPRHIRFPMEI >Mature_52_residues MFFFTEINAVAVNQIDIKRTSSGILQIVFTALPSDIPSRHQTPRHIRFPMEI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 5985; Mature: 5985
Theoretical pI: Translated: 9.69; Mature: 9.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFFFTEINAVAVNQIDIKRTSSGILQIVFTALPSDIPSRHQTPRHIRFPMEI CEEECCCCEEEECEEEEECCCCHHHHHHHHHCCCCCCCCCCCCCEEECCCCC >Mature Secondary Structure MFFFTEINAVAVNQIDIKRTSSGILQIVFTALPSDIPSRHQTPRHIRFPMEI CEEECCCCEEEECEEEEECCCCHHHHHHHHHCCCCCCCCCCCCCEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA