| Definition | Syntrophus aciditrophicus SB chromosome, complete genome. |
|---|---|
| Accession | NC_007759 |
| Length | 3,179,300 |
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The map label for this gene is hppA
Identifier: 85859735
GI number: 85859735
Start: 1964610
End: 1966676
Strand: Direct
Name: hppA
Synonym: SYN_02772
Alternate gene names: 85859735
Gene position: 1964610-1966676 (Clockwise)
Preceding gene: 85859734
Following gene: 85859736
Centisome position: 61.79
GC content: 56.89
Gene sequence:
>2067_bases ATGGAATTTTTAGTAAATTTCGCTTGGTTGTGGGGTCTCCTCGGACTGGTGCTGGCGTTCTTCATCTATAAGTACGTCAT GTCCTTCCCCCCGGGAGACAAATTAATGGTGGAGATCATGGAGAGGATTCATGCCGGCGCCATGGTCTTTTTGAAGAGAG AATACAAGATTATTTCGATTTTTATCGTCGTCGTATTCATCCTGCTCTACGTCGCCTTGGATAATAAGTGGTCATCAGTG GCCTTCCTCGTGGGAGCGATCTGCTCCCTGTCAGCCGGCGTGTTCGGCATGCAGGCGGCGACCCTCTCGAATGCGAGAAC CGCGGAAGCGGCCAAGACGCACGGACAGGCCAAAGCCCTTACGGTGGCCTTCTTCGGTGGATCCGTCATGGGTCTTTCCG TGGCCTCCCTCGGTCTTCTCGGGCTTGGCATTTTCTTCTATTTCTTCGCCGAAACGGATCCGGTCGTCATCAATGGTTTT TCCCTTGGCGCCTCGTCGATCGCCCTCTTTGCCCGTGTCGGTGGCGGCATCTTCACCAAGACGGCCGATGTGGGTTCCGA CCTGGTGGGTAAAGTCGAGGCTGGGATTCCCGAAGACGATCCGAGAAACCCTGGGGTCACCGCGGACAACGTCGGTGACA ACGTCGGCGATATCGCCGGTATGGGAGCGGACCTTTTTGAATCATACGTCGGCTCCGTCGTTGCCGCCATTGCTATCGGC GCCACGATGGGGCTCGGGATGGATGGCATGGCGATGCGCTGGATGATGCTGCCGATGCTTTTCATCATCGTCGGAATGCT GGCATCGGTCATCGGGATCGGAATGTTCAATATGCTCAAGAATATGAAACCCTCTTCGGCACTGAGCAACGGCCTCTATA TTGCGGGGATTCTTTTCATTATCGCTGCCTACTTCGTTGTCAAGGGCGTTACGGCAGGGATGTCTCCTGAATACCTGGGC AGCCTCGGAATCAAAGGACCTCTCGGCCCCTTCTGGGCCGTACTTCTTGGAATTGTCGCCGGCATGCTGATCGGTGCTGT CACGGAATATTACACAGCCCGGGGACCGGTCCACAGGATCGCTGAAGCTTCTCAGACAGGGCCGGCCACTACGATCATCA GCGGCTTCGCCATTGGTCTCGAGAGCGTTGCCACTCCGGTCTTCTTTATTGCCATGGCGATCTGGGGTTCATACGTCACC TGCGGTCTCTACGGTATTGCCATTGCCGGTGTCGGCATGCTGGGCACAGTTGGAATGACCATGTCCGTGGACAGCTACGG TCCGATTTCCGATAATGCCGGCGGTATTGCCGAGCAGGCTCACATGCCCCCGCATGTCCGGGAAATCACGGATGGCCTGG ACGCGGTCGGAAACACCACCGCCGCGATCGGTAAAGGGTTCGCCATCGGTTCCGCGGCACTTACAGCCCTGGCCATGTTC GCCGCCTACACCGCAACGGTCAAGACCTTCCCCGGATTTGAAACGTTTACCCTCGACCTGACAGAGGCACACGTGATTAC GGGTGTCTTCCTCGGCGGGATGATTCCCTGCCTGCTGGCAGCGCTCACGATGACAGCGGTCGGTGAAGCCGCATTCGACA TGATCAACGAGATCCGGAGACAGTTCAGAGAGATTCCCGGTATCATGGAAGGAACGACTCCTCCCGATACGAACAGATGT GTCGACATCGCCACCACGGCCGCCCTGAAGAGGATGATCGTCCCCGGCATCGCGTCGGTTATCGCTCCGATCCTGGTCGG CGTCTTCATCGGCCCCCATGCTCTTGGCGGATTCCTTGCCGGAGCTACGCTTACCGGCGTTATCCTGGGTCTTCTGATGG CTAACTCCGGTGGTGCGTGGGACAACGCGAAGAAATACATCGAGCAGGGATATTTCGGCGGGAAAGGATCTGAGGCGCAC AAAGCAGGCGTTATCGGTGACACCGTCGGCGACCCCTTCAAGGATACCTCGGGACCGGCAATGAATATTCTCATCAAGTT GATGTCGGTTGTGTCCCTCGTGACCGCTCCGGCGATCATTTACCTGTACCATATGGTCTACGGCTAA
Upstream 100 bases:
>100_bases CGGTGATTAATGTGGTTGCATCTGTCATTCAGGCACCGGTGAACGGATGTAACGCAAGAATCATAAAATACTTTAATCAG GAGGTACAAAAAACGGGATT
Downstream 100 bases:
>100_bases TCCGAAAACGTTAGACTCGAACGAAAAAGGGGTGGATTTCTTCCACCCCTTTTTTTATTTAATTAAGGAATCCTCATGGA TTCCGGCTGGCAATCTCGGC
Product: membrane-bound proton-translocating pyrophosphatase
Products: NA
Alternate protein names: Membrane-bound sodium-translocating pyrophosphatase; Pyrophosphate-energized inorganic pyrophosphatase; Na(+)-PPase [H]
Number of amino acids: Translated: 688; Mature: 688
Protein sequence:
>688_residues MEFLVNFAWLWGLLGLVLAFFIYKYVMSFPPGDKLMVEIMERIHAGAMVFLKREYKIISIFIVVVFILLYVALDNKWSSV AFLVGAICSLSAGVFGMQAATLSNARTAEAAKTHGQAKALTVAFFGGSVMGLSVASLGLLGLGIFFYFFAETDPVVINGF SLGASSIALFARVGGGIFTKTADVGSDLVGKVEAGIPEDDPRNPGVTADNVGDNVGDIAGMGADLFESYVGSVVAAIAIG ATMGLGMDGMAMRWMMLPMLFIIVGMLASVIGIGMFNMLKNMKPSSALSNGLYIAGILFIIAAYFVVKGVTAGMSPEYLG SLGIKGPLGPFWAVLLGIVAGMLIGAVTEYYTARGPVHRIAEASQTGPATTIISGFAIGLESVATPVFFIAMAIWGSYVT CGLYGIAIAGVGMLGTVGMTMSVDSYGPISDNAGGIAEQAHMPPHVREITDGLDAVGNTTAAIGKGFAIGSAALTALAMF AAYTATVKTFPGFETFTLDLTEAHVITGVFLGGMIPCLLAALTMTAVGEAAFDMINEIRRQFREIPGIMEGTTPPDTNRC VDIATTAALKRMIVPGIASVIAPILVGVFIGPHALGGFLAGATLTGVILGLLMANSGGAWDNAKKYIEQGYFGGKGSEAH KAGVIGDTVGDPFKDTSGPAMNILIKLMSVVSLVTAPAIIYLYHMVYG
Sequences:
>Translated_688_residues MEFLVNFAWLWGLLGLVLAFFIYKYVMSFPPGDKLMVEIMERIHAGAMVFLKREYKIISIFIVVVFILLYVALDNKWSSV AFLVGAICSLSAGVFGMQAATLSNARTAEAAKTHGQAKALTVAFFGGSVMGLSVASLGLLGLGIFFYFFAETDPVVINGF SLGASSIALFARVGGGIFTKTADVGSDLVGKVEAGIPEDDPRNPGVTADNVGDNVGDIAGMGADLFESYVGSVVAAIAIG ATMGLGMDGMAMRWMMLPMLFIIVGMLASVIGIGMFNMLKNMKPSSALSNGLYIAGILFIIAAYFVVKGVTAGMSPEYLG SLGIKGPLGPFWAVLLGIVAGMLIGAVTEYYTARGPVHRIAEASQTGPATTIISGFAIGLESVATPVFFIAMAIWGSYVT CGLYGIAIAGVGMLGTVGMTMSVDSYGPISDNAGGIAEQAHMPPHVREITDGLDAVGNTTAAIGKGFAIGSAALTALAMF AAYTATVKTFPGFETFTLDLTEAHVITGVFLGGMIPCLLAALTMTAVGEAAFDMINEIRRQFREIPGIMEGTTPPDTNRC VDIATTAALKRMIVPGIASVIAPILVGVFIGPHALGGFLAGATLTGVILGLLMANSGGAWDNAKKYIEQGYFGGKGSEAH KAGVIGDTVGDPFKDTSGPAMNILIKLMSVVSLVTAPAIIYLYHMVYG >Mature_688_residues MEFLVNFAWLWGLLGLVLAFFIYKYVMSFPPGDKLMVEIMERIHAGAMVFLKREYKIISIFIVVVFILLYVALDNKWSSV AFLVGAICSLSAGVFGMQAATLSNARTAEAAKTHGQAKALTVAFFGGSVMGLSVASLGLLGLGIFFYFFAETDPVVINGF SLGASSIALFARVGGGIFTKTADVGSDLVGKVEAGIPEDDPRNPGVTADNVGDNVGDIAGMGADLFESYVGSVVAAIAIG ATMGLGMDGMAMRWMMLPMLFIIVGMLASVIGIGMFNMLKNMKPSSALSNGLYIAGILFIIAAYFVVKGVTAGMSPEYLG SLGIKGPLGPFWAVLLGIVAGMLIGAVTEYYTARGPVHRIAEASQTGPATTIISGFAIGLESVATPVFFIAMAIWGSYVT CGLYGIAIAGVGMLGTVGMTMSVDSYGPISDNAGGIAEQAHMPPHVREITDGLDAVGNTTAAIGKGFAIGSAALTALAMF AAYTATVKTFPGFETFTLDLTEAHVITGVFLGGMIPCLLAALTMTAVGEAAFDMINEIRRQFREIPGIMEGTTPPDTNRC VDIATTAALKRMIVPGIASVIAPILVGVFIGPHALGGFLAGATLTGVILGLLMANSGGAWDNAKKYIEQGYFGGKGSEAH KAGVIGDTVGDPFKDTSGPAMNILIKLMSVVSLVTAPAIIYLYHMVYG
Specific function: Sodium pump that utilizes the energy of pyrophosphate hydrolysis as the driving force for Na(+) movement across the membrane [H]
COG id: COG3808
COG function: function code C; Inorganic pyrophosphatase
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the H(+)-translocating pyrophosphatase (TC 3.A.10) family. K(+)-stimulated subfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004131 [H]
Pfam domain/function: PF03030 H_PPase [H]
EC number: =3.6.1.1 [H]
Molecular weight: Translated: 71519; Mature: 71519
Theoretical pI: Translated: 5.26; Mature: 5.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 5.2 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 5.2 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEFLVNFAWLWGLLGLVLAFFIYKYVMSFPPGDKLMVEIMERIHAGAMVFLKREYKIISI CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCEEEHHHHHHHHHH FIVVVFILLYVALDNKWSSVAFLVGAICSLSAGVFGMQAATLSNARTAEAAKTHGQAKAL HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHCCCHHEE TVAFFGGSVMGLSVASLGLLGLGIFFYFFAETDPVVINGFSLGASSIALFARVGGGIFTK EEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHCCCCEEE TADVGSDLVGKVEAGIPEDDPRNPGVTADNVGDNVGDIAGMGADLFESYVGSVVAAIAIG CHHHCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHH ATMGLGMDGMAMRWMMLPMLFIIVGMLASVIGIGMFNMLKNMKPSSALSNGLYIAGILFI HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCHHHHHHHHH IAAYFVVKGVTAGMSPEYLGSLGIKGPLGPFWAVLLGIVAGMLIGAVTEYYTARGPVHRI HHHHHHHHHHHCCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH AEASQTGPATTIISGFAIGLESVATPVFFIAMAIWGSYVTCGLYGIAIAGVGMLGTVGMT HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCE MSVDSYGPISDNAGGIAEQAHMPPHVREITDGLDAVGNTTAAIGKGFAIGSAALTALAMF EECCCCCCCCCCCCCCHHHCCCCHHHHHHHHHHHHHCCCHHHHHCCCHHHHHHHHHHHHH AAYTATVKTFPGFETFTLDLTEAHVITGVFLGGMIPCLLAALTMTAVGEAAFDMINEIRR HHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QFREIPGIMEGTTPPDTNRCVDIATTAALKRMIVPGIASVIAPILVGVFIGPHALGGFLA HHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GATLTGVILGLLMANSGGAWDNAKKYIEQGYFGGKGSEAHKAGVIGDTVGDPFKDTSGPA HHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHH MNILIKLMSVVSLVTAPAIIYLYHMVYG HHHHHHHHHHHHHHHHHHHHHHHHHHHC >Mature Secondary Structure MEFLVNFAWLWGLLGLVLAFFIYKYVMSFPPGDKLMVEIMERIHAGAMVFLKREYKIISI CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCEEEHHHHHHHHHH FIVVVFILLYVALDNKWSSVAFLVGAICSLSAGVFGMQAATLSNARTAEAAKTHGQAKAL HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHCCCHHEE TVAFFGGSVMGLSVASLGLLGLGIFFYFFAETDPVVINGFSLGASSIALFARVGGGIFTK EEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHCCCCEEE TADVGSDLVGKVEAGIPEDDPRNPGVTADNVGDNVGDIAGMGADLFESYVGSVVAAIAIG CHHHCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHH ATMGLGMDGMAMRWMMLPMLFIIVGMLASVIGIGMFNMLKNMKPSSALSNGLYIAGILFI HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCHHHHHHHHH IAAYFVVKGVTAGMSPEYLGSLGIKGPLGPFWAVLLGIVAGMLIGAVTEYYTARGPVHRI HHHHHHHHHHHCCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH AEASQTGPATTIISGFAIGLESVATPVFFIAMAIWGSYVTCGLYGIAIAGVGMLGTVGMT HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCE MSVDSYGPISDNAGGIAEQAHMPPHVREITDGLDAVGNTTAAIGKGFAIGSAALTALAMF EECCCCCCCCCCCCCCHHHCCCCHHHHHHHHHHHHHCCCHHHHHCCCHHHHHHHHHHHHH AAYTATVKTFPGFETFTLDLTEAHVITGVFLGGMIPCLLAALTMTAVGEAAFDMINEIRR HHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QFREIPGIMEGTTPPDTNRCVDIATTAALKRMIVPGIASVIAPILVGVFIGPHALGGFLA HHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GATLTGVILGLLMANSGGAWDNAKKYIEQGYFGGKGSEAHKAGVIGDTVGDPFKDTSGPA HHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHH MNILIKLMSVVSLVTAPAIIYLYHMVYG HHHHHHHHHHHHHHHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 12552129 [H]