Definition Syntrophus aciditrophicus SB chromosome, complete genome.
Accession NC_007759
Length 3,179,300

Click here to switch to the map view.

The map label for this gene is 85859734

Identifier: 85859734

GI number: 85859734

Start: 1964237

End: 1964479

Strand: Direct

Name: 85859734

Synonym: SYN_03629

Alternate gene names: NA

Gene position: 1964237-1964479 (Clockwise)

Preceding gene: 85859733

Following gene: 85859735

Centisome position: 61.78

GC content: 46.5

Gene sequence:

>243_bases
TTGATTTTTAAAGGCGCTCCCTTCATCATGAGGGAGCGCCTTTTTTATCTCTCCAAATGTGTCCCTCCGCCTGATTTTGA
ATTTTTATCTTTCTTTTTCATTGACACACAACCACATTTAACCTATCCTCCTTCCGCGAAAGGGCAACTTGTTTTGCGTA
TCCCGGTCGGCAGACCTCCTTTTTGCAGAAATGGCCGAACGGCGGGTCGCTTGAGCGATTTTACGGACAGGAGATTTCGG
TAG

Upstream 100 bases:

>100_bases
ATGGGATTGGCAAGCTTGTTCTTCCTGATCGCTTTGGTATTCGTTTACAGATCATTCTATGGAATGAGAATCGCTGAAAA
GGGTTAATCAGCCACAGCTT

Downstream 100 bases:

>100_bases
TTACCCGTTACAAATAGAGAGTGTGAATTGCGGTGATTAATGTGGTTGCATCTGTCATTCAGGCACCGGTGAACGGATGT
AACGCAAGAATCATAAAATA

Product: cytoplasmic protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 80; Mature: 80

Protein sequence:

>80_residues
MIFKGAPFIMRERLFYLSKCVPPPDFEFLSFFFIDTQPHLTYPPSAKGQLVLRIPVGRPPFCRNGRTAGRLSDFTDRRFR

Sequences:

>Translated_80_residues
MIFKGAPFIMRERLFYLSKCVPPPDFEFLSFFFIDTQPHLTYPPSAKGQLVLRIPVGRPPFCRNGRTAGRLSDFTDRRFR
>Mature_80_residues
MIFKGAPFIMRERLFYLSKCVPPPDFEFLSFFFIDTQPHLTYPPSAKGQLVLRIPVGRPPFCRNGRTAGRLSDFTDRRFR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9369; Mature: 9369

Theoretical pI: Translated: 11.03; Mature: 11.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIFKGAPFIMRERLFYLSKCVPPPDFEFLSFFFIDTQPHLTYPPSAKGQLVLRIPVGRPP
CCCCCCCHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCEECCCCCCCCEEEEECCCCCC
FCRNGRTAGRLSDFTDRRFR
CCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MIFKGAPFIMRERLFYLSKCVPPPDFEFLSFFFIDTQPHLTYPPSAKGQLVLRIPVGRPP
CCCCCCCHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCEECCCCCCCCEEEEECCCCCC
FCRNGRTAGRLSDFTDRRFR
CCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA