| Definition | Syntrophus aciditrophicus SB chromosome, complete genome. |
|---|---|
| Accession | NC_007759 |
| Length | 3,179,300 |
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The map label for this gene is 85859734
Identifier: 85859734
GI number: 85859734
Start: 1964237
End: 1964479
Strand: Direct
Name: 85859734
Synonym: SYN_03629
Alternate gene names: NA
Gene position: 1964237-1964479 (Clockwise)
Preceding gene: 85859733
Following gene: 85859735
Centisome position: 61.78
GC content: 46.5
Gene sequence:
>243_bases TTGATTTTTAAAGGCGCTCCCTTCATCATGAGGGAGCGCCTTTTTTATCTCTCCAAATGTGTCCCTCCGCCTGATTTTGA ATTTTTATCTTTCTTTTTCATTGACACACAACCACATTTAACCTATCCTCCTTCCGCGAAAGGGCAACTTGTTTTGCGTA TCCCGGTCGGCAGACCTCCTTTTTGCAGAAATGGCCGAACGGCGGGTCGCTTGAGCGATTTTACGGACAGGAGATTTCGG TAG
Upstream 100 bases:
>100_bases ATGGGATTGGCAAGCTTGTTCTTCCTGATCGCTTTGGTATTCGTTTACAGATCATTCTATGGAATGAGAATCGCTGAAAA GGGTTAATCAGCCACAGCTT
Downstream 100 bases:
>100_bases TTACCCGTTACAAATAGAGAGTGTGAATTGCGGTGATTAATGTGGTTGCATCTGTCATTCAGGCACCGGTGAACGGATGT AACGCAAGAATCATAAAATA
Product: cytoplasmic protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 80; Mature: 80
Protein sequence:
>80_residues MIFKGAPFIMRERLFYLSKCVPPPDFEFLSFFFIDTQPHLTYPPSAKGQLVLRIPVGRPPFCRNGRTAGRLSDFTDRRFR
Sequences:
>Translated_80_residues MIFKGAPFIMRERLFYLSKCVPPPDFEFLSFFFIDTQPHLTYPPSAKGQLVLRIPVGRPPFCRNGRTAGRLSDFTDRRFR >Mature_80_residues MIFKGAPFIMRERLFYLSKCVPPPDFEFLSFFFIDTQPHLTYPPSAKGQLVLRIPVGRPPFCRNGRTAGRLSDFTDRRFR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9369; Mature: 9369
Theoretical pI: Translated: 11.03; Mature: 11.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIFKGAPFIMRERLFYLSKCVPPPDFEFLSFFFIDTQPHLTYPPSAKGQLVLRIPVGRPP CCCCCCCHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCEECCCCCCCCEEEEECCCCCC FCRNGRTAGRLSDFTDRRFR CCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MIFKGAPFIMRERLFYLSKCVPPPDFEFLSFFFIDTQPHLTYPPSAKGQLVLRIPVGRPP CCCCCCCHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCEECCCCCCCCEEEEECCCCCC FCRNGRTAGRLSDFTDRRFR CCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA