| Definition | Syntrophus aciditrophicus SB chromosome, complete genome. |
|---|---|
| Accession | NC_007759 |
| Length | 3,179,300 |
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The map label for this gene is corA [H]
Identifier: 85859672
GI number: 85859672
Start: 1903735
End: 1904802
Strand: Direct
Name: corA [H]
Synonym: SYN_02763
Alternate gene names: 85859672
Gene position: 1903735-1904802 (Clockwise)
Preceding gene: 85859671
Following gene: 85859673
Centisome position: 59.88
GC content: 48.78
Gene sequence:
>1068_bases ATGGTTAGACCCGGGAAAACCCGATCGGGGAAAGTGGGCCTGCCGCCTGGTTCCCTCGTTCATATCGGGGAAAAAACTGC GGAAAAGACGAAAATCTCACTGATTCATTATAATGAACAGACTCTGCAGAGGATGGACATCCAGCAGATATCCGCTTGTG CTTCCTTTCTTCAAGAAACGGGAATCAGCTGGATCAGCTTCGAGGGCATTCCGGAAATTCCCGTCCTGGAAGAGCTCGGT TTGAAATTCGGCCTCCACCCTCTGACCCTCGAAGACATCCTGAACACGGACCAGCGTCCGAAAATGGAGGATTATGGTGA TTACCTCTATATCGTGCTGAAGATGTTCTACTTCGACAATCCAGGAAAAGTCGACATTAAATCGGAACAGATCAGTATTA TTTTAGGCGCCAATTTTGTGATTTCCTTCCAGGAACAGGCCGGCAGCATATTTCAACCCATCAGAGAACGACTCGACAAT GCCAGAGGACGGCTGCGTAGAAGCGGCCCGGATTATCTGACCCACGCGTTGATTGACGCAATTGTGGATCATTACTTTCT TATTCTTGAAAATTCAGGGGAAAGAATAGAACTGCTCGAACAGGCACTGATTAAAAGCCCCTCTGCCGGAATGCTTGATA CCCTGCAGGGGCTGAAGAAAGAGATGATCCTGCTGCGAAAGTCACTCTGGCCTCTCCGGGAGATGATCAGCACCATGGAG CGATCAGAATCCCCGTTGATAAGCAAATCGTCCGTTGTTTATTTCAAGGACATTTACGATCACACCATCCATATCATCGA CACCCTGGAAACCTTCAGGGATATGCTGTCCGGCATGATGGACATCTACCTTTCCAGTATAAGCAACCGGATGAACGAAG TTATGAAGGTGCTGACCGTCATCGCGACTCTCTTTATGCCGCTGACCTTCATCGCCGGGATTTATGGCATGAATTTCAAA TATATGCCGGAACTGGAGTGGCGGTGGGGCTATGCCATGGTATGGGGAATTCTACTGACCATCGCGGGTCTTATGGTGCT CTACTTCCGCAGAAAGAATTGGTGGTAA
Upstream 100 bases:
>100_bases GGCGGTAAAATACCTGAGGTCACAGTCAACGTAAAACTGAAAAAAAGGATCAGCACACATCCTTCACAAGCCCCAAGACC TTCCACGGAGATGACGGAAG
Downstream 100 bases:
>100_bases CTGTTCCGCCTGTCGTTTTCGGGTTTACGGACACACCCCACCGGCGTATTGAAGAAACTCCATCTCAAAATATAATGAAT AGTCAGAGAGATACAACCGG
Product: magnesium and cobalt transport protein corA
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 355; Mature: 355
Protein sequence:
>355_residues MVRPGKTRSGKVGLPPGSLVHIGEKTAEKTKISLIHYNEQTLQRMDIQQISACASFLQETGISWISFEGIPEIPVLEELG LKFGLHPLTLEDILNTDQRPKMEDYGDYLYIVLKMFYFDNPGKVDIKSEQISIILGANFVISFQEQAGSIFQPIRERLDN ARGRLRRSGPDYLTHALIDAIVDHYFLILENSGERIELLEQALIKSPSAGMLDTLQGLKKEMILLRKSLWPLREMISTME RSESPLISKSSVVYFKDIYDHTIHIIDTLETFRDMLSGMMDIYLSSISNRMNEVMKVLTVIATLFMPLTFIAGIYGMNFK YMPELEWRWGYAMVWGILLTIAGLMVLYFRRKNWW
Sequences:
>Translated_355_residues MVRPGKTRSGKVGLPPGSLVHIGEKTAEKTKISLIHYNEQTLQRMDIQQISACASFLQETGISWISFEGIPEIPVLEELG LKFGLHPLTLEDILNTDQRPKMEDYGDYLYIVLKMFYFDNPGKVDIKSEQISIILGANFVISFQEQAGSIFQPIRERLDN ARGRLRRSGPDYLTHALIDAIVDHYFLILENSGERIELLEQALIKSPSAGMLDTLQGLKKEMILLRKSLWPLREMISTME RSESPLISKSSVVYFKDIYDHTIHIIDTLETFRDMLSGMMDIYLSSISNRMNEVMKVLTVIATLFMPLTFIAGIYGMNFK YMPELEWRWGYAMVWGILLTIAGLMVLYFRRKNWW >Mature_355_residues MVRPGKTRSGKVGLPPGSLVHIGEKTAEKTKISLIHYNEQTLQRMDIQQISACASFLQETGISWISFEGIPEIPVLEELG LKFGLHPLTLEDILNTDQRPKMEDYGDYLYIVLKMFYFDNPGKVDIKSEQISIILGANFVISFQEQAGSIFQPIRERLDN ARGRLRRSGPDYLTHALIDAIVDHYFLILENSGERIELLEQALIKSPSAGMLDTLQGLKKEMILLRKSLWPLREMISTME RSESPLISKSSVVYFKDIYDHTIHIIDTLETFRDMLSGMMDIYLSSISNRMNEVMKVLTVIATLFMPLTFIAGIYGMNFK YMPELEWRWGYAMVWGILLTIAGLMVLYFRRKNWW
Specific function: Mediates influx of magnesium ions [H]
COG id: COG0598
COG function: function code P; Mg2+ and Co2+ transporters
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CorA metal ion transporter (MIT) (TC 1.A.35) family [H]
Homologues:
Organism=Escherichia coli, GI1787604, Length=276, Percent_Identity=21.3768115942029, Blast_Score=74, Evalue=2e-14, Organism=Escherichia coli, GI2367297, Length=77, Percent_Identity=41.5584415584416, Blast_Score=71, Evalue=9e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004488 - InterPro: IPR002523 [H]
Pfam domain/function: PF01544 CorA [H]
EC number: NA
Molecular weight: Translated: 40848; Mature: 40848
Theoretical pI: Translated: 6.41; Mature: 6.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 5.1 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 5.1 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVRPGKTRSGKVGLPPGSLVHIGEKTAEKTKISLIHYNEQTLQRMDIQQISACASFLQET CCCCCCCCCCCCCCCCCCEEECCCHHHHHHEEEEEEECHHHHHHHHHHHHHHHHHHHHHC GISWISFEGIPEIPVLEELGLKFGLHPLTLEDILNTDQRPKMEDYGDYLYIVLKMFYFDN CCCEEEECCCCCCCCHHHHCHHHCCCCEEHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCC PGKVDIKSEQISIILGANFVISFQEQAGSIFQPIRERLDNARGRLRRSGPDYLTHALIDA CCCEEEECCEEEEEEECCEEEEEHHHCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH IVDHYFLILENSGERIELLEQALIKSPSAGMLDTLQGLKKEMILLRKSLWPLREMISTME HHHHEEEEEECCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RSESPLISKSSVVYFKDIYDHTIHIIDTLETFRDMLSGMMDIYLSSISNRMNEVMKVLTV HCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IATLFMPLTFIAGIYGMNFKYMPELEWRWGYAMVWGILLTIAGLMVLYFRRKNWW HHHHHHHHHHHHHHHCCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MVRPGKTRSGKVGLPPGSLVHIGEKTAEKTKISLIHYNEQTLQRMDIQQISACASFLQET CCCCCCCCCCCCCCCCCCEEECCCHHHHHHEEEEEEECHHHHHHHHHHHHHHHHHHHHHC GISWISFEGIPEIPVLEELGLKFGLHPLTLEDILNTDQRPKMEDYGDYLYIVLKMFYFDN CCCEEEECCCCCCCCHHHHCHHHCCCCEEHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCC PGKVDIKSEQISIILGANFVISFQEQAGSIFQPIRERLDNARGRLRRSGPDYLTHALIDA CCCEEEECCEEEEEEECCEEEEEHHHCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH IVDHYFLILENSGERIELLEQALIKSPSAGMLDTLQGLKKEMILLRKSLWPLREMISTME HHHHEEEEEECCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RSESPLISKSSVVYFKDIYDHTIHIIDTLETFRDMLSGMMDIYLSSISNRMNEVMKVLTV HCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IATLFMPLTFIAGIYGMNFKYMPELEWRWGYAMVWGILLTIAGLMVLYFRRKNWW HHHHHHHHHHHHHHHCCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 10360571 [H]