Definition Syntrophus aciditrophicus SB chromosome, complete genome.
Accession NC_007759
Length 3,179,300

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The map label for this gene is 85859634

Identifier: 85859634

GI number: 85859634

Start: 1864287

End: 1864940

Strand: Direct

Name: 85859634

Synonym: SYN_02453

Alternate gene names: NA

Gene position: 1864287-1864940 (Clockwise)

Preceding gene: 85859633

Following gene: 85859635

Centisome position: 58.64

GC content: 50.92

Gene sequence:

>654_bases
GTGGTGCGCCCTATCCCGTTAAACAAAAGAAGTGAGCGACCCTTGTGTTTGCAGGAGTGTCCCGTGAAGAGAAGATACTG
GAACGCTTTCATTGCCCTTTTCCTGATTCTGATGATTTCCGCGTGCGGAGGATTGCGTTATTCACAGGTCGACACCGAGG
CCGGAAATTTTCACCCGAGACGTCTGGGTGTTCTTCCCGTCGACGTGGGGACTTACGAAGAAGCACGAGGAACCGTTGAT
CAAATGATCGCCGGGGTGCTGACCGAAAAGAAGTGGTTCAACGATGTTGTGGCCGGGGATGACATCAACCGTCAATTCCA
TGCGAATGAAGAATTCCGCGCGGTCATGACCGACTACATGGCCAAGCTCAAAACCGTTAATTTTTCCGATCCCCAGCTCA
GCGCAAGGATCGGCGAACTGTGTCAGGTTGATTCTTTTCTTGTCGTTTCCGTTGATTATTGGAATTACACGACCGAAAAC
GGAGACAAAGTGGGAAAGGTCAGTCTGGGCATCAAAATGATTCAAGCGGAAACGGGAAAAGTCCTTTGGAAGGCGGGCCA
TTTCCGGGCAGAAAAATACCGGTTCATCAAACCTGAGCTGCTGAGTGTGGCCAGAACCCTTTTCAGGGAGATGATCGGTT
ACATGCCTCGCTGA

Upstream 100 bases:

>100_bases
TTTGTTTTAAACTTTGTGATAGAAGGGCGTCGTTTTCCGGGGTTGTTCTGGAGGGTCTTCTGGAAACCAGCTATATTATC
GCCGGGTTGAGTTCACTGCT

Downstream 100 bases:

>100_bases
ACGAGAGCGAAAAAGTGCGGACAGACGGATTTAACCGTTTGATCCCGAATCGCGAGATGCGGTTCAATCTAAGGGGGTAC
ACTCATGAAAGATAAGGTAC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 217; Mature: 217

Protein sequence:

>217_residues
MVRPIPLNKRSERPLCLQECPVKRRYWNAFIALFLILMISACGGLRYSQVDTEAGNFHPRRLGVLPVDVGTYEEARGTVD
QMIAGVLTEKKWFNDVVAGDDINRQFHANEEFRAVMTDYMAKLKTVNFSDPQLSARIGELCQVDSFLVVSVDYWNYTTEN
GDKVGKVSLGIKMIQAETGKVLWKAGHFRAEKYRFIKPELLSVARTLFREMIGYMPR

Sequences:

>Translated_217_residues
MVRPIPLNKRSERPLCLQECPVKRRYWNAFIALFLILMISACGGLRYSQVDTEAGNFHPRRLGVLPVDVGTYEEARGTVD
QMIAGVLTEKKWFNDVVAGDDINRQFHANEEFRAVMTDYMAKLKTVNFSDPQLSARIGELCQVDSFLVVSVDYWNYTTEN
GDKVGKVSLGIKMIQAETGKVLWKAGHFRAEKYRFIKPELLSVARTLFREMIGYMPR
>Mature_217_residues
MVRPIPLNKRSERPLCLQECPVKRRYWNAFIALFLILMISACGGLRYSQVDTEAGNFHPRRLGVLPVDVGTYEEARGTVD
QMIAGVLTEKKWFNDVVAGDDINRQFHANEEFRAVMTDYMAKLKTVNFSDPQLSARIGELCQVDSFLVVSVDYWNYTTEN
GDKVGKVSLGIKMIQAETGKVLWKAGHFRAEKYRFIKPELLSVARTLFREMIGYMPR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24848; Mature: 24848

Theoretical pI: Translated: 9.12; Mature: 9.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVRPIPLNKRSERPLCLQECPVKRRYWNAFIALFLILMISACGGLRYSQVDTEAGNFHPR
CCCCCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCCCCC
RLGVLPVDVGTYEEARGTVDQMIAGVLTEKKWFNDVVAGDDINRQFHANEEFRAVMTDYM
EECEEEECCCCCHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHH
AKLKTVNFSDPQLSARIGELCQVDSFLVVSVDYWNYTTENGDKVGKVSLGIKMIQAETGK
HHHHCCCCCCCHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCEEEHHHCEEEEECCCCC
VLWKAGHFRAEKYRFIKPELLSVARTLFREMIGYMPR
EEEECCCCCHHHHHCCCHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MVRPIPLNKRSERPLCLQECPVKRRYWNAFIALFLILMISACGGLRYSQVDTEAGNFHPR
CCCCCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCCCCC
RLGVLPVDVGTYEEARGTVDQMIAGVLTEKKWFNDVVAGDDINRQFHANEEFRAVMTDYM
EECEEEECCCCCHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHH
AKLKTVNFSDPQLSARIGELCQVDSFLVVSVDYWNYTTENGDKVGKVSLGIKMIQAETGK
HHHHCCCCCCCHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCEEEHHHCEEEEECCCCC
VLWKAGHFRAEKYRFIKPELLSVARTLFREMIGYMPR
EEEECCCCCHHHHHCCCHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA