| Definition | Syntrophus aciditrophicus SB chromosome, complete genome. |
|---|---|
| Accession | NC_007759 |
| Length | 3,179,300 |
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The map label for this gene is 85859617
Identifier: 85859617
GI number: 85859617
Start: 1845795
End: 1846910
Strand: Direct
Name: 85859617
Synonym: SYN_02000
Alternate gene names: NA
Gene position: 1845795-1846910 (Clockwise)
Preceding gene: 85859615
Following gene: 85859618
Centisome position: 58.06
GC content: 52.6
Gene sequence:
>1116_bases TTGTGTCAAGGTCTAATGACCCACAGCCGGTGCGTGAAAAGCAATACCATGTTCAGCATTCGTATCAAAGCAGGTCGGAA AGCCTACGAACAGATTCGTGACGGCGGTTTTTCCTGCGACCGGATTTCTGCTTTTTTCGCTCCCGCAGCCGGTCCACGCT GGCTTGTTGCTACGGGATTCGATCTGACACTTCTTAAAGCGGGGCTTCTGGGAAGGAAGAAACCGGTTCAGTTGATCGGC TCGTCTTCCGGTGCCTGGCGTTTTGCCGCCTGGGTGCAGCCGGAAGCAGAAAAGAGCTATCTAAACCTTATGGAAGCTTA CATCCGTATCCCTTACCATAAGGACGATCGCGCGGGTATAGTCCTGCAAAACCTGATCAATGTCGTCAACTCCTACATTG AAGATGACGCCCTGCCTTTTGCCCTGGCTCATAAACATTACCGCCTTGCCGTCCTGACCGCCCGCGTGCGGCATCTCGTT GCTTCGGAATCTTCCTGGATTCAGTCATCCGGATTGTTTCTGTGCTTTCTGATGAACGCCCTGAGCCGATCCACTCTGGA TCACTTCACGGAGCGGGTCGTTTTTTACAATGGACCGAACCCGCCTGGCTTCTGTCTTAAAAGTCCTTTCCGAGGCCGGT TTATTCAACTCAATAGAACCAATTTCAAGCATGCAATTCTGGCCTCCGGAGCAATTCCCCTGTTTGTGGCCGGAATTCGC GATATTTACGGGGCGCCCCGGGGTGTCTACCGGGATGGCGGCCTCGTCGATTATCACCAGACCTATGACTTCGCCGAATC AGACGATGACATGACTCTCTTTTTCCACCATCAGGAACGTATTATTCCCGGCTGGTTTGACAAGCGTTTGAAGCATCGCA GAACTCCTGATGTCCTTCTGGACCATACCCTGATGGTTTTTCCCACAGAGGATTTTGTTTCAACCCTTCCTCTTGGAAAG CTTCCGGACCGGGAGGATTTCAGATCTTTCATGGATGATCCGGCAACGCGCATCCGGAACTGGCAGGAGGCCGTCCGACG TTCCGCCCCTCTGGGCGAACAGTTTTTTGAGCTGGTTGAAAGCGGCAAGCTCAGATCTATGGTCGAACGGATTTAG
Upstream 100 bases:
>100_bases ATGTTCATGTAAATAACCCGATCTCTTTAAAGCCGCGCCATGTTTTCATGCAAATTCATCCCTTGCCGACGGCGGTGCTA CTCTACAAAAATGGATCGGG
Downstream 100 bases:
>100_bases TTCCTGAGACGAATCAGCTTTGACATCAAGGCGACAACCCCATGATTACACTGTTTAAAGTCGGACAACATTCTAATGTA CGCAAAGGAAATCGGTTCAT
Product: cytoplasmic protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 371; Mature: 371
Protein sequence:
>371_residues MCQGLMTHSRCVKSNTMFSIRIKAGRKAYEQIRDGGFSCDRISAFFAPAAGPRWLVATGFDLTLLKAGLLGRKKPVQLIG SSSGAWRFAAWVQPEAEKSYLNLMEAYIRIPYHKDDRAGIVLQNLINVVNSYIEDDALPFALAHKHYRLAVLTARVRHLV ASESSWIQSSGLFLCFLMNALSRSTLDHFTERVVFYNGPNPPGFCLKSPFRGRFIQLNRTNFKHAILASGAIPLFVAGIR DIYGAPRGVYRDGGLVDYHQTYDFAESDDDMTLFFHHQERIIPGWFDKRLKHRRTPDVLLDHTLMVFPTEDFVSTLPLGK LPDREDFRSFMDDPATRIRNWQEAVRRSAPLGEQFFELVESGKLRSMVERI
Sequences:
>Translated_371_residues MCQGLMTHSRCVKSNTMFSIRIKAGRKAYEQIRDGGFSCDRISAFFAPAAGPRWLVATGFDLTLLKAGLLGRKKPVQLIG SSSGAWRFAAWVQPEAEKSYLNLMEAYIRIPYHKDDRAGIVLQNLINVVNSYIEDDALPFALAHKHYRLAVLTARVRHLV ASESSWIQSSGLFLCFLMNALSRSTLDHFTERVVFYNGPNPPGFCLKSPFRGRFIQLNRTNFKHAILASGAIPLFVAGIR DIYGAPRGVYRDGGLVDYHQTYDFAESDDDMTLFFHHQERIIPGWFDKRLKHRRTPDVLLDHTLMVFPTEDFVSTLPLGK LPDREDFRSFMDDPATRIRNWQEAVRRSAPLGEQFFELVESGKLRSMVERI >Mature_371_residues MCQGLMTHSRCVKSNTMFSIRIKAGRKAYEQIRDGGFSCDRISAFFAPAAGPRWLVATGFDLTLLKAGLLGRKKPVQLIG SSSGAWRFAAWVQPEAEKSYLNLMEAYIRIPYHKDDRAGIVLQNLINVVNSYIEDDALPFALAHKHYRLAVLTARVRHLV ASESSWIQSSGLFLCFLMNALSRSTLDHFTERVVFYNGPNPPGFCLKSPFRGRFIQLNRTNFKHAILASGAIPLFVAGIR DIYGAPRGVYRDGGLVDYHQTYDFAESDDDMTLFFHHQERIIPGWFDKRLKHRRTPDVLLDHTLMVFPTEDFVSTLPLGK LPDREDFRSFMDDPATRIRNWQEAVRRSAPLGEQFFELVESGKLRSMVERI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42296; Mature: 42296
Theoretical pI: Translated: 9.59; Mature: 9.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MCQGLMTHSRCVKSNTMFSIRIKAGRKAYEQIRDGGFSCDRISAFFAPAAGPRWLVATGF CCCCHHHHHHHHCCCCEEEEEECCCHHHHHHHHCCCCCHHHHHHHHCCCCCCCEEEEECC DLTLLKAGLLGRKKPVQLIGSSSGAWRFAAWVQPEAEKSYLNLMEAYIRIPYHKDDRAGI CHHHHHHHHCCCCCCCEEEECCCCCEEEEEECCCCHHHHHHHHHHHHHCCCCCCCCCCHH VLQNLINVVNSYIEDDALPFALAHKHYRLAVLTARVRHLVASESSWIQSSGLFLCFLMNA HHHHHHHHHHHHHHHCCCCHHHHCCCHHHHHHHHHHHHHHHCCCHHHHCCCHHHHHHHHH LSRSTLDHFTERVVFYNGPNPPGFCLKSPFRGRFIQLNRTNFKHAILASGAIPLFVAGIR HHHHHHHHHHCEEEEECCCCCCCCCCCCCCCCCEEEEECCCCCHHHHHCCCHHHHHHHHH DIYGAPRGVYRDGGLVDYHQTYDFAESDDDMTLFFHHQERIIPGWFDKRLKHRRTPDVLL HHHCCCCCCCCCCCEEEHHHCCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHCCCCCHHH DHTLMVFPTEDFVSTLPLGKLPDREDFRSFMDDPATRIRNWQEAVRRSAPLGEQFFELVE CCEEEEEECHHHHHHCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHCCCCCHHHHHHHH SGKLRSMVERI CCHHHHHHHHC >Mature Secondary Structure MCQGLMTHSRCVKSNTMFSIRIKAGRKAYEQIRDGGFSCDRISAFFAPAAGPRWLVATGF CCCCHHHHHHHHCCCCEEEEEECCCHHHHHHHHCCCCCHHHHHHHHCCCCCCCEEEEECC DLTLLKAGLLGRKKPVQLIGSSSGAWRFAAWVQPEAEKSYLNLMEAYIRIPYHKDDRAGI CHHHHHHHHCCCCCCCEEEECCCCCEEEEEECCCCHHHHHHHHHHHHHCCCCCCCCCCHH VLQNLINVVNSYIEDDALPFALAHKHYRLAVLTARVRHLVASESSWIQSSGLFLCFLMNA HHHHHHHHHHHHHHHCCCCHHHHCCCHHHHHHHHHHHHHHHCCCHHHHCCCHHHHHHHHH LSRSTLDHFTERVVFYNGPNPPGFCLKSPFRGRFIQLNRTNFKHAILASGAIPLFVAGIR HHHHHHHHHHCEEEEECCCCCCCCCCCCCCCCCEEEEECCCCCHHHHHCCCHHHHHHHHH DIYGAPRGVYRDGGLVDYHQTYDFAESDDDMTLFFHHQERIIPGWFDKRLKHRRTPDVLL HHHCCCCCCCCCCCEEEHHHCCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHCCCCCHHH DHTLMVFPTEDFVSTLPLGKLPDREDFRSFMDDPATRIRNWQEAVRRSAPLGEQFFELVE CCEEEEEECHHHHHHCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHCCCCCHHHHHHHH SGKLRSMVERI CCHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA