| Definition | Syntrophus aciditrophicus SB chromosome, complete genome. |
|---|---|
| Accession | NC_007759 |
| Length | 3,179,300 |
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The map label for this gene is 85859615
Identifier: 85859615
GI number: 85859615
Start: 1845616
End: 1845810
Strand: Direct
Name: 85859615
Synonym: SYN_02001
Alternate gene names: NA
Gene position: 1845616-1845810 (Clockwise)
Preceding gene: 85859613
Following gene: 85859617
Centisome position: 58.05
GC content: 48.72
Gene sequence:
>195_bases ATGCTCCAGTGCCTTTCCAGGCTGCCTCCTTCCGATCTTCGTGATGCCCATATGACAATTGCCGTTGACAACAGACCGGA TGTTCATGTAAATAACCCGATCTCTTTAAAGCCGCGCCATGTTTTCATGCAAATTCATCCCTTGCCGACGGCGGTGCTAC TCTACAAAAATGGATCGGGTTGTGTCAAGGTCTAA
Upstream 100 bases:
>100_bases CTTCAGGGCCCTGTCCTTGATTTCCGTCGGCATGCGGGAAAGTGTGCGAGAGGCTTCCCGCGCTCCTTCCGCCACTTGTC TCATTTCATCTTGAATAGCC
Downstream 100 bases:
>100_bases TGACCCACAGCCGGTGCGTGAAAAGCAATACCATGTTCAGCATTCGTATCAAAGCAGGTCGGAAAGCCTACGAACAGATT CGTGACGGCGGTTTTTCCTG
Product: cytoplasmic protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 64; Mature: 64
Protein sequence:
>64_residues MLQCLSRLPPSDLRDAHMTIAVDNRPDVHVNNPISLKPRHVFMQIHPLPTAVLLYKNGSGCVKV
Sequences:
>Translated_64_residues MLQCLSRLPPSDLRDAHMTIAVDNRPDVHVNNPISLKPRHVFMQIHPLPTAVLLYKNGSGCVKV >Mature_64_residues MLQCLSRLPPSDLRDAHMTIAVDNRPDVHVNNPISLKPRHVFMQIHPLPTAVLLYKNGSGCVKV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7156; Mature: 7156
Theoretical pI: Translated: 9.46; Mature: 9.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.1 %Cys (Translated Protein) 4.7 %Met (Translated Protein) 7.8 %Cys+Met (Translated Protein) 3.1 %Cys (Mature Protein) 4.7 %Met (Mature Protein) 7.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLQCLSRLPPSDLRDAHMTIAVDNRPDVHVNNPISLKPRHVFMQIHPLPTAVLLYKNGSG CCCCCCCCCCCCCCCCEEEEEECCCCCEEECCCCCCCCEEEEEEEECCCEEEEEEECCCC CVKV EEEC >Mature Secondary Structure MLQCLSRLPPSDLRDAHMTIAVDNRPDVHVNNPISLKPRHVFMQIHPLPTAVLLYKNGSG CCCCCCCCCCCCCCCCEEEEEECCCCCEEECCCCCCCCEEEEEEEECCCEEEEEEECCCC CVKV EEEC
PDB accession: NA
Resolution: NA
Structure class: Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA