Definition Syntrophus aciditrophicus SB chromosome, complete genome.
Accession NC_007759
Length 3,179,300

Click here to switch to the map view.

The map label for this gene is 85859615

Identifier: 85859615

GI number: 85859615

Start: 1845616

End: 1845810

Strand: Direct

Name: 85859615

Synonym: SYN_02001

Alternate gene names: NA

Gene position: 1845616-1845810 (Clockwise)

Preceding gene: 85859613

Following gene: 85859617

Centisome position: 58.05

GC content: 48.72

Gene sequence:

>195_bases
ATGCTCCAGTGCCTTTCCAGGCTGCCTCCTTCCGATCTTCGTGATGCCCATATGACAATTGCCGTTGACAACAGACCGGA
TGTTCATGTAAATAACCCGATCTCTTTAAAGCCGCGCCATGTTTTCATGCAAATTCATCCCTTGCCGACGGCGGTGCTAC
TCTACAAAAATGGATCGGGTTGTGTCAAGGTCTAA

Upstream 100 bases:

>100_bases
CTTCAGGGCCCTGTCCTTGATTTCCGTCGGCATGCGGGAAAGTGTGCGAGAGGCTTCCCGCGCTCCTTCCGCCACTTGTC
TCATTTCATCTTGAATAGCC

Downstream 100 bases:

>100_bases
TGACCCACAGCCGGTGCGTGAAAAGCAATACCATGTTCAGCATTCGTATCAAAGCAGGTCGGAAAGCCTACGAACAGATT
CGTGACGGCGGTTTTTCCTG

Product: cytoplasmic protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 64; Mature: 64

Protein sequence:

>64_residues
MLQCLSRLPPSDLRDAHMTIAVDNRPDVHVNNPISLKPRHVFMQIHPLPTAVLLYKNGSGCVKV

Sequences:

>Translated_64_residues
MLQCLSRLPPSDLRDAHMTIAVDNRPDVHVNNPISLKPRHVFMQIHPLPTAVLLYKNGSGCVKV
>Mature_64_residues
MLQCLSRLPPSDLRDAHMTIAVDNRPDVHVNNPISLKPRHVFMQIHPLPTAVLLYKNGSGCVKV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 7156; Mature: 7156

Theoretical pI: Translated: 9.46; Mature: 9.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.1 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
7.8 %Cys+Met (Translated Protein)
3.1 %Cys     (Mature Protein)
4.7 %Met     (Mature Protein)
7.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLQCLSRLPPSDLRDAHMTIAVDNRPDVHVNNPISLKPRHVFMQIHPLPTAVLLYKNGSG
CCCCCCCCCCCCCCCCEEEEEECCCCCEEECCCCCCCCEEEEEEEECCCEEEEEEECCCC
CVKV
EEEC
>Mature Secondary Structure
MLQCLSRLPPSDLRDAHMTIAVDNRPDVHVNNPISLKPRHVFMQIHPLPTAVLLYKNGSG
CCCCCCCCCCCCCCCCEEEEEECCCCCEEECCCCCCCCEEEEEEEECCCEEEEEEECCCC
CVKV
EEEC

PDB accession: NA

Resolution: NA

Structure class: Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA