| Definition | Syntrophus aciditrophicus SB chromosome, complete genome. |
|---|---|
| Accession | NC_007759 |
| Length | 3,179,300 |
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The map label for this gene is 85859567
Identifier: 85859567
GI number: 85859567
Start: 1791017
End: 1792756
Strand: Direct
Name: 85859567
Synonym: SYN_01910
Alternate gene names: NA
Gene position: 1791017-1792756 (Clockwise)
Preceding gene: 85859566
Following gene: 85859570
Centisome position: 56.33
GC content: 59.25
Gene sequence:
>1740_bases ATGAGAAGTTCATATCAAACCATACCGAAATCCACGGCCGTTCCATCTGCACTGGCAGCTAAGGAACTCCTGAAACTTTC CGGCAGCGCCCTGCTCAACCGCATCCTGGACGAGGAGAGTCCCAAGGTCTTTATCCGCTGCCTTCCGGAAGAGGACTTCT TCTGGATCGTCAAGAGGATCGGCGAGGCGGACTGCCTTCCCCTCCTGAGGCTCGCCTCGGAGGATCAGTGGGAATACCTT CTTGATCTGGAGACCTGGGAGAAGGACCGGCTTGATGCGGACAGGGTGCTGTCGTGGCTTTCGCAGCTGAGCGACGCCGA TCCGGCGCGATTCGCCGTCTGGCTATTCAGCCAAGGTGATGCCCTGTTTTCCTTGCTCATCAACGGGAAAGCGGAAGTCA TCATCAGGGACGGCGAAGAGGAAGCCGATCTTTCAGCGGGATATTTCACGCTGGATGGTCTGTTCTATATCCGGCCAATC AGGGAAGAGGATCGCGAGGCCATCGAAGGGCTTCTGCGGACCCTGGCCAGTAAGGATCATCATGCCTACCAGGCTCTTCT TTACGGCCTCGCTGCCCTCATTCCTACCGAGGTCGAGGAGGAACTCTACCGTTTTAGGAACGGCCGTCTCGCCGAACACG GATTTCTTCCCTACGAGGAGGCAGTTGCCGTATACGCTCCCCTTGACCCGGCGGTACTTCGCGCCGAGAAGCCGCCGCTC CTTCTTCCTGGACGGCTCTGCTCCACCGAGGAAGGCGCGCTTATCCCTGTCTCTCCGCTCATGCATGTCGGAGAGGACCT CCTGTTTGCCGAGGCACTTTCGCGTATCGGCGATCCCCTTCTCCAGGACCGCATCCGCCTGGAATTCGCCGGCCTGTGCA ACCGAATCGTTGCCGCCGACACCCCTGCCGGGGAGATCGATTCCGAACGGCTGTCCGCATCCTGTCGGCGAGCGGCTTCC TATCTGAATGTCGCCCTGGAACGGCTCTGCGACAAGGACGGCGAGGCGGCGGCAACCCTGCTCAAGGACAACCCCTTGCT GGCGATATTCCGGGTGGGGTACGGCCTGGCCCTGAAGCTTCGCTGGGAGGCGGATCGGTGGCTAAAGAAGAGCCTCTTTC TCCAGCAGGGGAAGACGAATGCCTTTTGGGGAACACCCTGGGAGGAGACCTTGGAGGGGCTTTGCGCCCCCCGTCCCCTT TATTTCGCAGGCAGGGAGGCGCAGAATCCGCACCGGGATTTCAGAATGGTCGCGGAACTGGAAGAAACCCGTTGCCGGGT CGAGCAAGTCAAGGCGATCGACCGCTTGTTGATGGACCTCGCCGTAAGGCACGGAGAAAGCTCGCGATTGCCAGCCTGGG CGGAGACGTTTCATCCGCTTATCTTCAACCGGTGGGTGCGCGCCATCCTGGGAAGCGTGATGTCGGCGGAGCCCCTCGCG GGGGAAGAAGCGAGGCGCTTCTTCCGTCTGGTCCGCCGGAACGACAAGGGACCGCCCTACCGTATGGCGGGATTCAAGGA GGCTTTTATCCGCGACCTCTCCCGGGCGTCCTTCGATGTTGACGAGAAAGCAACGCAAGCCCTTCGTGAAGCCCTCTCCG GAATCTGGGATTCATTCCGCGGGGAATACGAAAATATCGAAGAAGGAAATCTGGAGAGGCGTTATCTTAGGTTTCTTCGT GTGACCCTATTAGATGGTCCCGAGCAGAAAGACCGGTTCAATGAAAGTCCAAAAATTTGA
Upstream 100 bases:
>100_bases CATGCCGTCGGACATGGGGGATTATGACTAACCCCTCCTGAAGCCGCCCTCCCGCTTCCGGGAAACCGGGGCGGGGGCGG TCCCTCCCTTTGTTCGCGCA
Downstream 100 bases:
>100_bases CGAAGCTGCCACAAGCAAGCATGATGATGTTTTTGTTGGAGTAAACGACCTTCTAAGGTAACCTGATGGTCAGTCTCGTT TTCGAAAGCCATCGGCTTTT
Product: cytoplasmic protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 579; Mature: 579
Protein sequence:
>579_residues MRSSYQTIPKSTAVPSALAAKELLKLSGSALLNRILDEESPKVFIRCLPEEDFFWIVKRIGEADCLPLLRLASEDQWEYL LDLETWEKDRLDADRVLSWLSQLSDADPARFAVWLFSQGDALFSLLINGKAEVIIRDGEEEADLSAGYFTLDGLFYIRPI REEDREAIEGLLRTLASKDHHAYQALLYGLAALIPTEVEEELYRFRNGRLAEHGFLPYEEAVAVYAPLDPAVLRAEKPPL LLPGRLCSTEEGALIPVSPLMHVGEDLLFAEALSRIGDPLLQDRIRLEFAGLCNRIVAADTPAGEIDSERLSASCRRAAS YLNVALERLCDKDGEAAATLLKDNPLLAIFRVGYGLALKLRWEADRWLKKSLFLQQGKTNAFWGTPWEETLEGLCAPRPL YFAGREAQNPHRDFRMVAELEETRCRVEQVKAIDRLLMDLAVRHGESSRLPAWAETFHPLIFNRWVRAILGSVMSAEPLA GEEARRFFRLVRRNDKGPPYRMAGFKEAFIRDLSRASFDVDEKATQALREALSGIWDSFRGEYENIEEGNLERRYLRFLR VTLLDGPEQKDRFNESPKI
Sequences:
>Translated_579_residues MRSSYQTIPKSTAVPSALAAKELLKLSGSALLNRILDEESPKVFIRCLPEEDFFWIVKRIGEADCLPLLRLASEDQWEYL LDLETWEKDRLDADRVLSWLSQLSDADPARFAVWLFSQGDALFSLLINGKAEVIIRDGEEEADLSAGYFTLDGLFYIRPI REEDREAIEGLLRTLASKDHHAYQALLYGLAALIPTEVEEELYRFRNGRLAEHGFLPYEEAVAVYAPLDPAVLRAEKPPL LLPGRLCSTEEGALIPVSPLMHVGEDLLFAEALSRIGDPLLQDRIRLEFAGLCNRIVAADTPAGEIDSERLSASCRRAAS YLNVALERLCDKDGEAAATLLKDNPLLAIFRVGYGLALKLRWEADRWLKKSLFLQQGKTNAFWGTPWEETLEGLCAPRPL YFAGREAQNPHRDFRMVAELEETRCRVEQVKAIDRLLMDLAVRHGESSRLPAWAETFHPLIFNRWVRAILGSVMSAEPLA GEEARRFFRLVRRNDKGPPYRMAGFKEAFIRDLSRASFDVDEKATQALREALSGIWDSFRGEYENIEEGNLERRYLRFLR VTLLDGPEQKDRFNESPKI >Mature_579_residues MRSSYQTIPKSTAVPSALAAKELLKLSGSALLNRILDEESPKVFIRCLPEEDFFWIVKRIGEADCLPLLRLASEDQWEYL LDLETWEKDRLDADRVLSWLSQLSDADPARFAVWLFSQGDALFSLLINGKAEVIIRDGEEEADLSAGYFTLDGLFYIRPI REEDREAIEGLLRTLASKDHHAYQALLYGLAALIPTEVEEELYRFRNGRLAEHGFLPYEEAVAVYAPLDPAVLRAEKPPL LLPGRLCSTEEGALIPVSPLMHVGEDLLFAEALSRIGDPLLQDRIRLEFAGLCNRIVAADTPAGEIDSERLSASCRRAAS YLNVALERLCDKDGEAAATLLKDNPLLAIFRVGYGLALKLRWEADRWLKKSLFLQQGKTNAFWGTPWEETLEGLCAPRPL YFAGREAQNPHRDFRMVAELEETRCRVEQVKAIDRLLMDLAVRHGESSRLPAWAETFHPLIFNRWVRAILGSVMSAEPLA GEEARRFFRLVRRNDKGPPYRMAGFKEAFIRDLSRASFDVDEKATQALREALSGIWDSFRGEYENIEEGNLERRYLRFLR VTLLDGPEQKDRFNESPKI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 65816; Mature: 65816
Theoretical pI: Translated: 4.87; Mature: 4.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRSSYQTIPKSTAVPSALAAKELLKLSGSALLNRILDEESPKVFIRCLPEEDFFWIVKRI CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHH GEADCLPLLRLASEDQWEYLLDLETWEKDRLDADRVLSWLSQLSDADPARFAVWLFSQGD CCCHHHHHHHHCCCCCCCEEEEHHHCCHHCCCHHHHHHHHHHHCCCCCCEEEEEEEECCH ALFSLLINGKAEVIIRDGEEEADLSAGYFTLDGLFYIRPIREEDREAIEGLLRTLASKDH HHHHHHCCCCEEEEEECCCCCCCCCCCEEEECCEEEEECCCHHHHHHHHHHHHHHHCCCH HAYQALLYGLAALIPTEVEEELYRFRNGRLAEHGFLPYEEAVAVYAPLDPAVLRAEKPPL HHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCHHHCEEEECCCCHHHHCCCCCCE LLPGRLCSTEEGALIPVSPLMHVGEDLLFAEALSRIGDPLLQDRIRLEFAGLCNRIVAAD EECCCCCCCCCCCEEECHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCC TPAGEIDSERLSASCRRAASYLNVALERLCDKDGEAAATLLKDNPLLAIFRVGYGLALKL CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCEEEEEECCCCEEEEE RWEADRWLKKSLFLQQGKTNAFWGTPWEETLEGLCAPRPLYFAGREAQNPHRDFRMVAEL EECHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCCEECCCCCCCCHHHHHHHHHH EETRCRVEQVKAIDRLLMDLAVRHGESSRLPAWAETFHPLIFNRWVRAILGSVMSAEPLA HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCC GEEARRFFRLVRRNDKGPPYRMAGFKEAFIRDLSRASFDVDEKATQALREALSGIWDSFR CHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHC GEYENIEEGNLERRYLRFLRVTLLDGPEQKDRFNESPKI CCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHCCCCCCC >Mature Secondary Structure MRSSYQTIPKSTAVPSALAAKELLKLSGSALLNRILDEESPKVFIRCLPEEDFFWIVKRI CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHH GEADCLPLLRLASEDQWEYLLDLETWEKDRLDADRVLSWLSQLSDADPARFAVWLFSQGD CCCHHHHHHHHCCCCCCCEEEEHHHCCHHCCCHHHHHHHHHHHCCCCCCEEEEEEEECCH ALFSLLINGKAEVIIRDGEEEADLSAGYFTLDGLFYIRPIREEDREAIEGLLRTLASKDH HHHHHHCCCCEEEEEECCCCCCCCCCCEEEECCEEEEECCCHHHHHHHHHHHHHHHCCCH HAYQALLYGLAALIPTEVEEELYRFRNGRLAEHGFLPYEEAVAVYAPLDPAVLRAEKPPL HHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCHHHCEEEECCCCHHHHCCCCCCE LLPGRLCSTEEGALIPVSPLMHVGEDLLFAEALSRIGDPLLQDRIRLEFAGLCNRIVAAD EECCCCCCCCCCCEEECHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCC TPAGEIDSERLSASCRRAASYLNVALERLCDKDGEAAATLLKDNPLLAIFRVGYGLALKL CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCEEEEEECCCCEEEEE RWEADRWLKKSLFLQQGKTNAFWGTPWEETLEGLCAPRPLYFAGREAQNPHRDFRMVAEL EECHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCCEECCCCCCCCHHHHHHHHHH EETRCRVEQVKAIDRLLMDLAVRHGESSRLPAWAETFHPLIFNRWVRAILGSVMSAEPLA HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCC GEEARRFFRLVRRNDKGPPYRMAGFKEAFIRDLSRASFDVDEKATQALREALSGIWDSFR CHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHC GEYENIEEGNLERRYLRFLRVTLLDGPEQKDRFNESPKI CCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA