Definition Syntrophus aciditrophicus SB chromosome, complete genome.
Accession NC_007759
Length 3,179,300

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The map label for this gene is 85859567

Identifier: 85859567

GI number: 85859567

Start: 1791017

End: 1792756

Strand: Direct

Name: 85859567

Synonym: SYN_01910

Alternate gene names: NA

Gene position: 1791017-1792756 (Clockwise)

Preceding gene: 85859566

Following gene: 85859570

Centisome position: 56.33

GC content: 59.25

Gene sequence:

>1740_bases
ATGAGAAGTTCATATCAAACCATACCGAAATCCACGGCCGTTCCATCTGCACTGGCAGCTAAGGAACTCCTGAAACTTTC
CGGCAGCGCCCTGCTCAACCGCATCCTGGACGAGGAGAGTCCCAAGGTCTTTATCCGCTGCCTTCCGGAAGAGGACTTCT
TCTGGATCGTCAAGAGGATCGGCGAGGCGGACTGCCTTCCCCTCCTGAGGCTCGCCTCGGAGGATCAGTGGGAATACCTT
CTTGATCTGGAGACCTGGGAGAAGGACCGGCTTGATGCGGACAGGGTGCTGTCGTGGCTTTCGCAGCTGAGCGACGCCGA
TCCGGCGCGATTCGCCGTCTGGCTATTCAGCCAAGGTGATGCCCTGTTTTCCTTGCTCATCAACGGGAAAGCGGAAGTCA
TCATCAGGGACGGCGAAGAGGAAGCCGATCTTTCAGCGGGATATTTCACGCTGGATGGTCTGTTCTATATCCGGCCAATC
AGGGAAGAGGATCGCGAGGCCATCGAAGGGCTTCTGCGGACCCTGGCCAGTAAGGATCATCATGCCTACCAGGCTCTTCT
TTACGGCCTCGCTGCCCTCATTCCTACCGAGGTCGAGGAGGAACTCTACCGTTTTAGGAACGGCCGTCTCGCCGAACACG
GATTTCTTCCCTACGAGGAGGCAGTTGCCGTATACGCTCCCCTTGACCCGGCGGTACTTCGCGCCGAGAAGCCGCCGCTC
CTTCTTCCTGGACGGCTCTGCTCCACCGAGGAAGGCGCGCTTATCCCTGTCTCTCCGCTCATGCATGTCGGAGAGGACCT
CCTGTTTGCCGAGGCACTTTCGCGTATCGGCGATCCCCTTCTCCAGGACCGCATCCGCCTGGAATTCGCCGGCCTGTGCA
ACCGAATCGTTGCCGCCGACACCCCTGCCGGGGAGATCGATTCCGAACGGCTGTCCGCATCCTGTCGGCGAGCGGCTTCC
TATCTGAATGTCGCCCTGGAACGGCTCTGCGACAAGGACGGCGAGGCGGCGGCAACCCTGCTCAAGGACAACCCCTTGCT
GGCGATATTCCGGGTGGGGTACGGCCTGGCCCTGAAGCTTCGCTGGGAGGCGGATCGGTGGCTAAAGAAGAGCCTCTTTC
TCCAGCAGGGGAAGACGAATGCCTTTTGGGGAACACCCTGGGAGGAGACCTTGGAGGGGCTTTGCGCCCCCCGTCCCCTT
TATTTCGCAGGCAGGGAGGCGCAGAATCCGCACCGGGATTTCAGAATGGTCGCGGAACTGGAAGAAACCCGTTGCCGGGT
CGAGCAAGTCAAGGCGATCGACCGCTTGTTGATGGACCTCGCCGTAAGGCACGGAGAAAGCTCGCGATTGCCAGCCTGGG
CGGAGACGTTTCATCCGCTTATCTTCAACCGGTGGGTGCGCGCCATCCTGGGAAGCGTGATGTCGGCGGAGCCCCTCGCG
GGGGAAGAAGCGAGGCGCTTCTTCCGTCTGGTCCGCCGGAACGACAAGGGACCGCCCTACCGTATGGCGGGATTCAAGGA
GGCTTTTATCCGCGACCTCTCCCGGGCGTCCTTCGATGTTGACGAGAAAGCAACGCAAGCCCTTCGTGAAGCCCTCTCCG
GAATCTGGGATTCATTCCGCGGGGAATACGAAAATATCGAAGAAGGAAATCTGGAGAGGCGTTATCTTAGGTTTCTTCGT
GTGACCCTATTAGATGGTCCCGAGCAGAAAGACCGGTTCAATGAAAGTCCAAAAATTTGA

Upstream 100 bases:

>100_bases
CATGCCGTCGGACATGGGGGATTATGACTAACCCCTCCTGAAGCCGCCCTCCCGCTTCCGGGAAACCGGGGCGGGGGCGG
TCCCTCCCTTTGTTCGCGCA

Downstream 100 bases:

>100_bases
CGAAGCTGCCACAAGCAAGCATGATGATGTTTTTGTTGGAGTAAACGACCTTCTAAGGTAACCTGATGGTCAGTCTCGTT
TTCGAAAGCCATCGGCTTTT

Product: cytoplasmic protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 579; Mature: 579

Protein sequence:

>579_residues
MRSSYQTIPKSTAVPSALAAKELLKLSGSALLNRILDEESPKVFIRCLPEEDFFWIVKRIGEADCLPLLRLASEDQWEYL
LDLETWEKDRLDADRVLSWLSQLSDADPARFAVWLFSQGDALFSLLINGKAEVIIRDGEEEADLSAGYFTLDGLFYIRPI
REEDREAIEGLLRTLASKDHHAYQALLYGLAALIPTEVEEELYRFRNGRLAEHGFLPYEEAVAVYAPLDPAVLRAEKPPL
LLPGRLCSTEEGALIPVSPLMHVGEDLLFAEALSRIGDPLLQDRIRLEFAGLCNRIVAADTPAGEIDSERLSASCRRAAS
YLNVALERLCDKDGEAAATLLKDNPLLAIFRVGYGLALKLRWEADRWLKKSLFLQQGKTNAFWGTPWEETLEGLCAPRPL
YFAGREAQNPHRDFRMVAELEETRCRVEQVKAIDRLLMDLAVRHGESSRLPAWAETFHPLIFNRWVRAILGSVMSAEPLA
GEEARRFFRLVRRNDKGPPYRMAGFKEAFIRDLSRASFDVDEKATQALREALSGIWDSFRGEYENIEEGNLERRYLRFLR
VTLLDGPEQKDRFNESPKI

Sequences:

>Translated_579_residues
MRSSYQTIPKSTAVPSALAAKELLKLSGSALLNRILDEESPKVFIRCLPEEDFFWIVKRIGEADCLPLLRLASEDQWEYL
LDLETWEKDRLDADRVLSWLSQLSDADPARFAVWLFSQGDALFSLLINGKAEVIIRDGEEEADLSAGYFTLDGLFYIRPI
REEDREAIEGLLRTLASKDHHAYQALLYGLAALIPTEVEEELYRFRNGRLAEHGFLPYEEAVAVYAPLDPAVLRAEKPPL
LLPGRLCSTEEGALIPVSPLMHVGEDLLFAEALSRIGDPLLQDRIRLEFAGLCNRIVAADTPAGEIDSERLSASCRRAAS
YLNVALERLCDKDGEAAATLLKDNPLLAIFRVGYGLALKLRWEADRWLKKSLFLQQGKTNAFWGTPWEETLEGLCAPRPL
YFAGREAQNPHRDFRMVAELEETRCRVEQVKAIDRLLMDLAVRHGESSRLPAWAETFHPLIFNRWVRAILGSVMSAEPLA
GEEARRFFRLVRRNDKGPPYRMAGFKEAFIRDLSRASFDVDEKATQALREALSGIWDSFRGEYENIEEGNLERRYLRFLR
VTLLDGPEQKDRFNESPKI
>Mature_579_residues
MRSSYQTIPKSTAVPSALAAKELLKLSGSALLNRILDEESPKVFIRCLPEEDFFWIVKRIGEADCLPLLRLASEDQWEYL
LDLETWEKDRLDADRVLSWLSQLSDADPARFAVWLFSQGDALFSLLINGKAEVIIRDGEEEADLSAGYFTLDGLFYIRPI
REEDREAIEGLLRTLASKDHHAYQALLYGLAALIPTEVEEELYRFRNGRLAEHGFLPYEEAVAVYAPLDPAVLRAEKPPL
LLPGRLCSTEEGALIPVSPLMHVGEDLLFAEALSRIGDPLLQDRIRLEFAGLCNRIVAADTPAGEIDSERLSASCRRAAS
YLNVALERLCDKDGEAAATLLKDNPLLAIFRVGYGLALKLRWEADRWLKKSLFLQQGKTNAFWGTPWEETLEGLCAPRPL
YFAGREAQNPHRDFRMVAELEETRCRVEQVKAIDRLLMDLAVRHGESSRLPAWAETFHPLIFNRWVRAILGSVMSAEPLA
GEEARRFFRLVRRNDKGPPYRMAGFKEAFIRDLSRASFDVDEKATQALREALSGIWDSFRGEYENIEEGNLERRYLRFLR
VTLLDGPEQKDRFNESPKI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 65816; Mature: 65816

Theoretical pI: Translated: 4.87; Mature: 4.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRSSYQTIPKSTAVPSALAAKELLKLSGSALLNRILDEESPKVFIRCLPEEDFFWIVKRI
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHH
GEADCLPLLRLASEDQWEYLLDLETWEKDRLDADRVLSWLSQLSDADPARFAVWLFSQGD
CCCHHHHHHHHCCCCCCCEEEEHHHCCHHCCCHHHHHHHHHHHCCCCCCEEEEEEEECCH
ALFSLLINGKAEVIIRDGEEEADLSAGYFTLDGLFYIRPIREEDREAIEGLLRTLASKDH
HHHHHHCCCCEEEEEECCCCCCCCCCCEEEECCEEEEECCCHHHHHHHHHHHHHHHCCCH
HAYQALLYGLAALIPTEVEEELYRFRNGRLAEHGFLPYEEAVAVYAPLDPAVLRAEKPPL
HHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCHHHCEEEECCCCHHHHCCCCCCE
LLPGRLCSTEEGALIPVSPLMHVGEDLLFAEALSRIGDPLLQDRIRLEFAGLCNRIVAAD
EECCCCCCCCCCCEEECHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCC
TPAGEIDSERLSASCRRAASYLNVALERLCDKDGEAAATLLKDNPLLAIFRVGYGLALKL
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCEEEEEECCCCEEEEE
RWEADRWLKKSLFLQQGKTNAFWGTPWEETLEGLCAPRPLYFAGREAQNPHRDFRMVAEL
EECHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCCEECCCCCCCCHHHHHHHHHH
EETRCRVEQVKAIDRLLMDLAVRHGESSRLPAWAETFHPLIFNRWVRAILGSVMSAEPLA
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
GEEARRFFRLVRRNDKGPPYRMAGFKEAFIRDLSRASFDVDEKATQALREALSGIWDSFR
CHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHC
GEYENIEEGNLERRYLRFLRVTLLDGPEQKDRFNESPKI
CCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHCCCCCCC
>Mature Secondary Structure
MRSSYQTIPKSTAVPSALAAKELLKLSGSALLNRILDEESPKVFIRCLPEEDFFWIVKRI
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHH
GEADCLPLLRLASEDQWEYLLDLETWEKDRLDADRVLSWLSQLSDADPARFAVWLFSQGD
CCCHHHHHHHHCCCCCCCEEEEHHHCCHHCCCHHHHHHHHHHHCCCCCCEEEEEEEECCH
ALFSLLINGKAEVIIRDGEEEADLSAGYFTLDGLFYIRPIREEDREAIEGLLRTLASKDH
HHHHHHCCCCEEEEEECCCCCCCCCCCEEEECCEEEEECCCHHHHHHHHHHHHHHHCCCH
HAYQALLYGLAALIPTEVEEELYRFRNGRLAEHGFLPYEEAVAVYAPLDPAVLRAEKPPL
HHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCHHHCEEEECCCCHHHHCCCCCCE
LLPGRLCSTEEGALIPVSPLMHVGEDLLFAEALSRIGDPLLQDRIRLEFAGLCNRIVAAD
EECCCCCCCCCCCEEECHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCC
TPAGEIDSERLSASCRRAASYLNVALERLCDKDGEAAATLLKDNPLLAIFRVGYGLALKL
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCEEEEEECCCCEEEEE
RWEADRWLKKSLFLQQGKTNAFWGTPWEETLEGLCAPRPLYFAGREAQNPHRDFRMVAEL
EECHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCCEECCCCCCCCHHHHHHHHHH
EETRCRVEQVKAIDRLLMDLAVRHGESSRLPAWAETFHPLIFNRWVRAILGSVMSAEPLA
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
GEEARRFFRLVRRNDKGPPYRMAGFKEAFIRDLSRASFDVDEKATQALREALSGIWDSFR
CHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHC
GEYENIEEGNLERRYLRFLRVTLLDGPEQKDRFNESPKI
CCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA