Definition Syntrophus aciditrophicus SB chromosome, complete genome.
Accession NC_007759
Length 3,179,300

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The map label for this gene is 85859549

Identifier: 85859549

GI number: 85859549

Start: 1772755

End: 1773099

Strand: Direct

Name: 85859549

Synonym: SYN_01892

Alternate gene names: NA

Gene position: 1772755-1773099 (Clockwise)

Preceding gene: 85859547

Following gene: 85859550

Centisome position: 55.76

GC content: 60.0

Gene sequence:

>345_bases
ATGGAAGAGCAAAACCGGTTGACCGACCGAATCGAAAGGAAAGTCTCCCTGGCCAGGGAGCGGGATACAAGGGTCATCAT
CACCAGGACTTCCGATACCCACCGGGTCCTCGACATCGTGAGGAGCGCCGACAAGGCTATCCGCATCCTGAGAAACGGAC
TCCTGATCCGCTTCACGACCCCGGAGGTACTTCCCCTCTTGGAAGACTACCAGAAAGCGGTCGAGGGGTTGAACCGGATC
GCCGCCCGGATTTGCGAGAAGGCCGGGGTGCCCTACCGCCCTCCCAAGGGAATGGAGAATCGGGAGGACGGCGCCGACGC
CGAGGAGAAGGGCAAAAAGAAGTAA

Upstream 100 bases:

>100_bases
CATCGTGCTCACGACCGTGATCTTCATCATGGTCCCGGTGTTCAGCATCGGGATCGCTTTATACAGGGAACGAAAAACAT
CTCTCAAGGAGGAATGACGC

Downstream 100 bases:

>100_bases
ATTTCCCGGTCGTTCCGGGATACGAAATATTTTTATTAATCTCCCTAAAGGAGAACCCCCTTCCGGGGCCGAACTCATCC
GTAACCAGCCGGATGTTTCA

Product: cytoplasmic protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 114; Mature: 114

Protein sequence:

>114_residues
MEEQNRLTDRIERKVSLARERDTRVIITRTSDTHRVLDIVRSADKAIRILRNGLLIRFTTPEVLPLLEDYQKAVEGLNRI
AARICEKAGVPYRPPKGMENREDGADAEEKGKKK

Sequences:

>Translated_114_residues
MEEQNRLTDRIERKVSLARERDTRVIITRTSDTHRVLDIVRSADKAIRILRNGLLIRFTTPEVLPLLEDYQKAVEGLNRI
AARICEKAGVPYRPPKGMENREDGADAEEKGKKK
>Mature_114_residues
MEEQNRLTDRIERKVSLARERDTRVIITRTSDTHRVLDIVRSADKAIRILRNGLLIRFTTPEVLPLLEDYQKAVEGLNRI
AARICEKAGVPYRPPKGMENREDGADAEEKGKKK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13110; Mature: 13110

Theoretical pI: Translated: 10.21; Mature: 10.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEEQNRLTDRIERKVSLARERDTRVIITRTSDTHRVLDIVRSADKAIRILRNGLLIRFTT
CCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHCCEEEEECC
PEVLPLLEDYQKAVEGLNRIAARICEKAGVPYRPPKGMENREDGADAEEKGKKK
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHCCCCC
>Mature Secondary Structure
MEEQNRLTDRIERKVSLARERDTRVIITRTSDTHRVLDIVRSADKAIRILRNGLLIRFTT
CCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHCCEEEEECC
PEVLPLLEDYQKAVEGLNRIAARICEKAGVPYRPPKGMENREDGADAEEKGKKK
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA