| Definition | Syntrophus aciditrophicus SB chromosome, complete genome. |
|---|---|
| Accession | NC_007759 |
| Length | 3,179,300 |
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The map label for this gene is 85859549
Identifier: 85859549
GI number: 85859549
Start: 1772755
End: 1773099
Strand: Direct
Name: 85859549
Synonym: SYN_01892
Alternate gene names: NA
Gene position: 1772755-1773099 (Clockwise)
Preceding gene: 85859547
Following gene: 85859550
Centisome position: 55.76
GC content: 60.0
Gene sequence:
>345_bases ATGGAAGAGCAAAACCGGTTGACCGACCGAATCGAAAGGAAAGTCTCCCTGGCCAGGGAGCGGGATACAAGGGTCATCAT CACCAGGACTTCCGATACCCACCGGGTCCTCGACATCGTGAGGAGCGCCGACAAGGCTATCCGCATCCTGAGAAACGGAC TCCTGATCCGCTTCACGACCCCGGAGGTACTTCCCCTCTTGGAAGACTACCAGAAAGCGGTCGAGGGGTTGAACCGGATC GCCGCCCGGATTTGCGAGAAGGCCGGGGTGCCCTACCGCCCTCCCAAGGGAATGGAGAATCGGGAGGACGGCGCCGACGC CGAGGAGAAGGGCAAAAAGAAGTAA
Upstream 100 bases:
>100_bases CATCGTGCTCACGACCGTGATCTTCATCATGGTCCCGGTGTTCAGCATCGGGATCGCTTTATACAGGGAACGAAAAACAT CTCTCAAGGAGGAATGACGC
Downstream 100 bases:
>100_bases ATTTCCCGGTCGTTCCGGGATACGAAATATTTTTATTAATCTCCCTAAAGGAGAACCCCCTTCCGGGGCCGAACTCATCC GTAACCAGCCGGATGTTTCA
Product: cytoplasmic protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 114; Mature: 114
Protein sequence:
>114_residues MEEQNRLTDRIERKVSLARERDTRVIITRTSDTHRVLDIVRSADKAIRILRNGLLIRFTTPEVLPLLEDYQKAVEGLNRI AARICEKAGVPYRPPKGMENREDGADAEEKGKKK
Sequences:
>Translated_114_residues MEEQNRLTDRIERKVSLARERDTRVIITRTSDTHRVLDIVRSADKAIRILRNGLLIRFTTPEVLPLLEDYQKAVEGLNRI AARICEKAGVPYRPPKGMENREDGADAEEKGKKK >Mature_114_residues MEEQNRLTDRIERKVSLARERDTRVIITRTSDTHRVLDIVRSADKAIRILRNGLLIRFTTPEVLPLLEDYQKAVEGLNRI AARICEKAGVPYRPPKGMENREDGADAEEKGKKK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13110; Mature: 13110
Theoretical pI: Translated: 10.21; Mature: 10.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEEQNRLTDRIERKVSLARERDTRVIITRTSDTHRVLDIVRSADKAIRILRNGLLIRFTT CCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHCCEEEEECC PEVLPLLEDYQKAVEGLNRIAARICEKAGVPYRPPKGMENREDGADAEEKGKKK HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHCCCCC >Mature Secondary Structure MEEQNRLTDRIERKVSLARERDTRVIITRTSDTHRVLDIVRSADKAIRILRNGLLIRFTT CCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHCCEEEEECC PEVLPLLEDYQKAVEGLNRIAARICEKAGVPYRPPKGMENREDGADAEEKGKKK HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA