| Definition | Syntrophus aciditrophicus SB chromosome, complete genome. |
|---|---|
| Accession | NC_007759 |
| Length | 3,179,300 |
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The map label for this gene is 85859547
Identifier: 85859547
GI number: 85859547
Start: 1772047
End: 1772751
Strand: Direct
Name: 85859547
Synonym: SYN_01891
Alternate gene names: NA
Gene position: 1772047-1772751 (Clockwise)
Preceding gene: 85859545
Following gene: 85859549
Centisome position: 55.74
GC content: 57.73
Gene sequence:
>705_bases ATGCCGGGCGGAAGCGGAACGGTTGTCATCACGAGTGGCGGCGGGGAGTCGAAGCCTAAGGGGATTATCGACGCCCTGTC CGAAATCGAAAAATTCTCCGCCATGGACAGGAAGGGAAGCGAGATCCCGGAGCGGTTTTTCACAACCAAGAACCGGATCG AGTACTTCGAGGCGGGTTTCAAGGGCTCCCTGGTAAGCGGACTCGTTAGCGCCCTCCTCGCCCCTATGGCGATCGGGGTA CTGGAAAAACTGATCCCGGTGTTCGGGGAGGCGGAGCCGACGACATTCGACAAAGGTTTCGTCTTCCTGATCGCGCTCAG CTTCAGCATCGGCTACGCCGTTTTCATCGGGGGCATGGGAAGATACTACGCCGGGAGATTCACCCGGGTCATGATCCGGA GCTTCGTGAGCGGGACGATCGTCGGGGCGATCCTGAAGATGGTCCTGGCTTTCATCCTGTTCCACTTCCTGTACCTGGTC GTCCTGACTGATGGGAGGATCGCGGCGTTTCTCTCGATATTCCGCTCCTGGGTCGCGCCGGGGACGCTGGAGAATGTTTA CGGCTGGATCGTCGAGTTCAAGCCGGTTCTCCTCATATCGGCCTGGTTCATCGTGCTCACGACCGTGATCTTCATCATGG TCCCGGTGTTCAGCATCGGGATCGCTTTATACAGGGAACGAAAAACATCTCTCAAGGAGGAATGA
Upstream 100 bases:
>100_bases CGGTTCCAACTCGGCATTGCCTACTTCGTGATATCGGTCGTAATCACTTACGGGGCCACAGTCGTGAGATTCCTGGGGTT CAGGTAAAAAGGAAGCGTTT
Downstream 100 bases:
>100_bases CGCATGGAAGAGCAAAACCGGTTGACCGACCGAATCGAAAGGAAAGTCTCCCTGGCCAGGGAGCGGGATACAAGGGTCAT CATCACCAGGACTTCCGATA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 234; Mature: 233
Protein sequence:
>234_residues MPGGSGTVVITSGGGESKPKGIIDALSEIEKFSAMDRKGSEIPERFFTTKNRIEYFEAGFKGSLVSGLVSALLAPMAIGV LEKLIPVFGEAEPTTFDKGFVFLIALSFSIGYAVFIGGMGRYYAGRFTRVMIRSFVSGTIVGAILKMVLAFILFHFLYLV VLTDGRIAAFLSIFRSWVAPGTLENVYGWIVEFKPVLLISAWFIVLTTVIFIMVPVFSIGIALYRERKTSLKEE
Sequences:
>Translated_234_residues MPGGSGTVVITSGGGESKPKGIIDALSEIEKFSAMDRKGSEIPERFFTTKNRIEYFEAGFKGSLVSGLVSALLAPMAIGV LEKLIPVFGEAEPTTFDKGFVFLIALSFSIGYAVFIGGMGRYYAGRFTRVMIRSFVSGTIVGAILKMVLAFILFHFLYLV VLTDGRIAAFLSIFRSWVAPGTLENVYGWIVEFKPVLLISAWFIVLTTVIFIMVPVFSIGIALYRERKTSLKEE >Mature_233_residues PGGSGTVVITSGGGESKPKGIIDALSEIEKFSAMDRKGSEIPERFFTTKNRIEYFEAGFKGSLVSGLVSALLAPMAIGVL EKLIPVFGEAEPTTFDKGFVFLIALSFSIGYAVFIGGMGRYYAGRFTRVMIRSFVSGTIVGAILKMVLAFILFHFLYLVV LTDGRIAAFLSIFRSWVAPGTLENVYGWIVEFKPVLLISAWFIVLTTVIFIMVPVFSIGIALYRERKTSLKEE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25671; Mature: 25540
Theoretical pI: Translated: 9.73; Mature: 9.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPGGSGTVVITSGGGESKPKGIIDALSEIEKFSAMDRKGSEIPERFFTTKNRIEYFEAGF CCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCC KGSLVSGLVSALLAPMAIGVLEKLIPVFGEAEPTTFDKGFVFLIALSFSIGYAVFIGGMG CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCH RYYAGRFTRVMIRSFVSGTIVGAILKMVLAFILFHFLYLVVLTDGRIAAFLSIFRSWVAP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCC GTLENVYGWIVEFKPVLLISAWFIVLTTVIFIMVPVFSIGIALYRERKTSLKEE CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure PGGSGTVVITSGGGESKPKGIIDALSEIEKFSAMDRKGSEIPERFFTTKNRIEYFEAGF CCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCC KGSLVSGLVSALLAPMAIGVLEKLIPVFGEAEPTTFDKGFVFLIALSFSIGYAVFIGGMG CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCH RYYAGRFTRVMIRSFVSGTIVGAILKMVLAFILFHFLYLVVLTDGRIAAFLSIFRSWVAP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCC GTLENVYGWIVEFKPVLLISAWFIVLTTVIFIMVPVFSIGIALYRERKTSLKEE CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA