| Definition | Syntrophus aciditrophicus SB chromosome, complete genome. |
|---|---|
| Accession | NC_007759 |
| Length | 3,179,300 |
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The map label for this gene is 85859544
Identifier: 85859544
GI number: 85859544
Start: 1767919
End: 1769310
Strand: Direct
Name: 85859544
Synonym: SYN_01887
Alternate gene names: NA
Gene position: 1767919-1769310 (Clockwise)
Preceding gene: 85859543
Following gene: 85859545
Centisome position: 55.61
GC content: 54.74
Gene sequence:
>1392_bases ATGAAAGCGATCACGACGATCCTTTTCATCCTCGCGGTCGGCTGCCTCGCGATTTATGCCATATGCATATACATTTCCGC CTTGTGTAAATCACGAAATCCCGGAATATCTTCCTTAAAGGAAAAACGGGAGATCGCCCTGGAGGGTCTTGCGGTGATCT GGACACAAAGGCAGAAGGAGGAATCATCCCCCAAAAAAGACGAAGGCGAAGCAAGAAAAGAACCGGAAAAGAAACAGAGT GGAACTCATACGCCCGACACCGTCTCTTTCCGCGATCCGGATTTGAACACATTTTACATCGAAAATGTACGCAATAAGGC TGGGTTCCCTCACGGGGCGAGACAGGTTGCCGAGGGTATCCTGGAGATCTTGGACAGGGAAGGAGATTGTCCCTCGGTTG TCAATACCCACGGGGAGATTGAGGCCAGCATGGAAATGGGCGCTTACAACCGCCTGGCCCGGGTCACCTTGCGCGAGCAC GCCTTTGACACGGCCAGGGAGATGCTTTGCCTGATCGATCCCGGTCCGATGACGCCCATGGCAATCATCGCCGCCCTCGG CCATGACCTCGGAAAGATCCCCGCTTACAGGCAACATCTCTACTCCCTGGGGGACCATCCGGTCATCAGTGTTACCATCC TGGACAAGATCCCTGGATTCTCCGAGATGCCCAACAGGGGGGATATCATCACGGCCATCCGGGACCATCACCGCAAGCCC ATCGATTTCTTCTCGATCAAGCTCAAGGAGGCCGATCAGGAGGCAAGGAAAAAGGAACTCGCACGAAACTTCTCCCTCGG AGATACCAGAACTGGCCGGGAATCAACCTCTCGGGAAGAAGAGCCGCCCAAACGGGCTGCTTCAGCCGGCAGAGAGACAA TTTTCTGGGATGACGAGAACAAGACAGAAGGCAGAAAGAGAAAAGGGAAACCCAAGGAGGTCGAAATTCCCTGGTACAAC GGAAAAGCTATCCTTCAGGAAATCGCCGGACGCATCAACAAGGTTGATGAGGGTCGGTGGGAGGCCTTCTCTATGGTGAA CGGGTACGTCTACATCCAGGTCGGCCTCCTGTGGTCGGTCGCCAAGAAGGTGGCACGGATGAATGGCGATCCATCCGTTT TGATCGCGGACACCGACGATGAGTTGAGAGCGAATATCCTCTACTCCATCGTGGAGCGGCTCAAGACGGAGGAGAACGCG ATCGCGCGGGGGCTCATTCGCGACGGATACTTCAGCGCACCCTTCGTAGTCAGTATGCAGGACGGGACGGTCCATTCCAA GGCGTCATACGTGCCGTTCAACCTTGAAGCTTTCGGGATGCTCACCTCGGAACTGGAGTCTCAAAAATACGGCAAGGTAA GAGAAATCGTCGATGTCACGCCGAAGTGGTGA
Upstream 100 bases:
>100_bases AGTTCTATCTCATGACTTATTCCGGCCTGTTCCGCGGGCGGAGTCTCGATGTCTCCACACTTTATCTGGAAATCAAGTTC CCAGACCTCACGGCTGAGTC
Downstream 100 bases:
>100_bases AATATTTGCGTTGATTTCAGTGCGATACCCCGAACCTATAGTAAATATACAATATTTGAAAAGCTCTTTCACCTACGACT AAAGGAATTTCTGTGTGGAC
Product: metal dependent phosphohydrolases
Products: NA
Alternate protein names: Metal-Dependent Phosphohydrolase HD Sub Domain; Metal Dependent Phosphohydrolases; Metal Dependent Phosphohydrolase
Number of amino acids: Translated: 463; Mature: 463
Protein sequence:
>463_residues MKAITTILFILAVGCLAIYAICIYISALCKSRNPGISSLKEKREIALEGLAVIWTQRQKEESSPKKDEGEARKEPEKKQS GTHTPDTVSFRDPDLNTFYIENVRNKAGFPHGARQVAEGILEILDREGDCPSVVNTHGEIEASMEMGAYNRLARVTLREH AFDTAREMLCLIDPGPMTPMAIIAALGHDLGKIPAYRQHLYSLGDHPVISVTILDKIPGFSEMPNRGDIITAIRDHHRKP IDFFSIKLKEADQEARKKELARNFSLGDTRTGRESTSREEEPPKRAASAGRETIFWDDENKTEGRKRKGKPKEVEIPWYN GKAILQEIAGRINKVDEGRWEAFSMVNGYVYIQVGLLWSVAKKVARMNGDPSVLIADTDDELRANILYSIVERLKTEENA IARGLIRDGYFSAPFVVSMQDGTVHSKASYVPFNLEAFGMLTSELESQKYGKVREIVDVTPKW
Sequences:
>Translated_463_residues MKAITTILFILAVGCLAIYAICIYISALCKSRNPGISSLKEKREIALEGLAVIWTQRQKEESSPKKDEGEARKEPEKKQS GTHTPDTVSFRDPDLNTFYIENVRNKAGFPHGARQVAEGILEILDREGDCPSVVNTHGEIEASMEMGAYNRLARVTLREH AFDTAREMLCLIDPGPMTPMAIIAALGHDLGKIPAYRQHLYSLGDHPVISVTILDKIPGFSEMPNRGDIITAIRDHHRKP IDFFSIKLKEADQEARKKELARNFSLGDTRTGRESTSREEEPPKRAASAGRETIFWDDENKTEGRKRKGKPKEVEIPWYN GKAILQEIAGRINKVDEGRWEAFSMVNGYVYIQVGLLWSVAKKVARMNGDPSVLIADTDDELRANILYSIVERLKTEENA IARGLIRDGYFSAPFVVSMQDGTVHSKASYVPFNLEAFGMLTSELESQKYGKVREIVDVTPKW >Mature_463_residues MKAITTILFILAVGCLAIYAICIYISALCKSRNPGISSLKEKREIALEGLAVIWTQRQKEESSPKKDEGEARKEPEKKQS GTHTPDTVSFRDPDLNTFYIENVRNKAGFPHGARQVAEGILEILDREGDCPSVVNTHGEIEASMEMGAYNRLARVTLREH AFDTAREMLCLIDPGPMTPMAIIAALGHDLGKIPAYRQHLYSLGDHPVISVTILDKIPGFSEMPNRGDIITAIRDHHRKP IDFFSIKLKEADQEARKKELARNFSLGDTRTGRESTSREEEPPKRAASAGRETIFWDDENKTEGRKRKGKPKEVEIPWYN GKAILQEIAGRINKVDEGRWEAFSMVNGYVYIQVGLLWSVAKKVARMNGDPSVLIADTDDELRANILYSIVERLKTEENA IARGLIRDGYFSAPFVVSMQDGTVHSKASYVPFNLEAFGMLTSELESQKYGKVREIVDVTPKW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 51965; Mature: 51965
Theoretical pI: Translated: 7.06; Mature: 7.06
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKAITTILFILAVGCLAIYAICIYISALCKSRNPGISSLKEKREIALEGLAVIWTQRQKE CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH ESSPKKDEGEARKEPEKKQSGTHTPDTVSFRDPDLNTFYIENVRNKAGFPHGARQVAEGI CCCCCCCCCHHHCCCHHHHCCCCCCCCCCCCCCCCCEEEEECHHHHCCCCHHHHHHHHHH LEILDREGDCPSVVNTHGEIEASMEMGAYNRLARVTLREHAFDTAREMLCLIDPGPMTPM HHHHCCCCCCCHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCHH AIIAALGHDLGKIPAYRQHLYSLGDHPVISVTILDKIPGFSEMPNRGDIITAIRDHHRKP HHHHHHHHHHHCCHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCEEHHHHHCCCCC IDFFSIKLKEADQEARKKELARNFSLGDTRTGRESTSREEEPPKRAASAGRETIFWDDEN CCEEEEEEHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCEEEECCCC KTEGRKRKGKPKEVEIPWYNGKAILQEIAGRINKVDEGRWEAFSMVNGYVYIQVGLLWSV CCCCHHHCCCCCEEEECCCCCHHHHHHHHHHHCCCCCCHHHHHHHHCCEEEEEHHHHHHH AKKVARMNGDPSVLIADTDDELRANILYSIVERLKTEENAIARGLIRDGYFSAPFVVSMQ HHHHHHCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEC DGTVHSKASYVPFNLEAFGMLTSELESQKYGKVREIVDVTPKW CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MKAITTILFILAVGCLAIYAICIYISALCKSRNPGISSLKEKREIALEGLAVIWTQRQKE CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH ESSPKKDEGEARKEPEKKQSGTHTPDTVSFRDPDLNTFYIENVRNKAGFPHGARQVAEGI CCCCCCCCCHHHCCCHHHHCCCCCCCCCCCCCCCCCEEEEECHHHHCCCCHHHHHHHHHH LEILDREGDCPSVVNTHGEIEASMEMGAYNRLARVTLREHAFDTAREMLCLIDPGPMTPM HHHHCCCCCCCHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCHH AIIAALGHDLGKIPAYRQHLYSLGDHPVISVTILDKIPGFSEMPNRGDIITAIRDHHRKP HHHHHHHHHHHCCHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCEEHHHHHCCCCC IDFFSIKLKEADQEARKKELARNFSLGDTRTGRESTSREEEPPKRAASAGRETIFWDDEN CCEEEEEEHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCEEEECCCC KTEGRKRKGKPKEVEIPWYNGKAILQEIAGRINKVDEGRWEAFSMVNGYVYIQVGLLWSV CCCCHHHCCCCCEEEECCCCCHHHHHHHHHHHCCCCCCHHHHHHHHCCEEEEEHHHHHHH AKKVARMNGDPSVLIADTDDELRANILYSIVERLKTEENAIARGLIRDGYFSAPFVVSMQ HHHHHHCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEC DGTVHSKASYVPFNLEAFGMLTSELESQKYGKVREIVDVTPKW CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA