| Definition | Syntrophus aciditrophicus SB chromosome, complete genome. |
|---|---|
| Accession | NC_007759 |
| Length | 3,179,300 |
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The map label for this gene is 85859514
Identifier: 85859514
GI number: 85859514
Start: 1737764
End: 1738783
Strand: Direct
Name: 85859514
Synonym: SYN_01856
Alternate gene names: NA
Gene position: 1737764-1738783 (Clockwise)
Preceding gene: 85859513
Following gene: 85859515
Centisome position: 54.66
GC content: 46.57
Gene sequence:
>1020_bases ATGACAGCAAGCATGGCATCCCAGTATGAAAAGGTGGGCAATCGCATTGCCCAGTACATGAAATCTTTACAGCCAGGTGA TGAATCGCTTCAGGAAAAACTTGGAGTTTTTTTAAAAAAGTATGAAAAAGCCCCTTTGTTCATAGTTGGCATCGATGAAT CCGTGTACGCCGAATGGCTTCGGAATCCCAATCCGGATGCGGTTAAAGAGTTTCGTCTTCCATTTCCAACAATGGTTCTG GATTTTCCGAGCGGACTTTTGCAGAAGAGCGCAAACCCGAGAATGAGCAACTCCGTTATCATCTACGTTGATACTGTCGG TGAAGATACTTATTTGTTTGAGGGACTCCAGACGGCAGAAGCTTTCCAAAATGCACTCGATACGGCGCCAGTTGGTGAAA AGGACATAATCACTTCAGCCGGTTGTTCTTTAGAAGCAGGAGAGATCGGAGAGCCCTTTTCCTTCGTGGTCCAAATGATT CCGGAAACAAATGGCTTCGTCGCAAATTACAGCTGCGAGTTCATTTATGATTGCCAGGTACCCGTGGCACCGCTCCCCGG GATCACTTCCTATGCAACTTTCAGCCGCTGTCAACCGCCGTCCGGCAATTGCATGACAAAGACTCCGCTCTGTAAAATGC TCGATTCTTCAACAAACTTTACGATAGTCTTCATCATGATGGTGATTGAATACATCAATAGGCAAGATCGTTTCATCGTA AAGATCACGCCTGATATGACAGACCGCGAAAAACGACTTGCAGCCAAAGGCAAAAAGTTCTCATTCAGCAAAAAGCCGGC GCACATTGTTCTGGATCACTCTCAGGTCCGAGAGCTCATTGCTGCCTCAAGGCAAGGAGGTACTCACTCCTCGCCATTGC CGCACCAGAGAAGAGGACACTGGAGAAGGCTCCAGTCTGACTATTTTAGAGAAAAAAAGAAGATTTGGGTGCGGCCGGCA GATATCAACAAGGGTATGTCTGTAAAGATCAATCGGAACGTCTACGAAGTTATTTCTTGA
Upstream 100 bases:
>100_bases GGCCGACATGAAAAAGTGGGTGCAGAGGCAGGAACAAGTGGGGTCATGAAAGCAGGCGAAAGCGTCATGAATCCCACGAA TCCGATTAGGAGAGAGCAAG
Downstream 100 bases:
>100_bases TCGCGTGTTTACGACAAGGGTTTTTTGCCTGAGAACAAAACGATCAGTCGTGAACATGTAAGGTCATCCTATCCTGAAGC CTCCCCGAGGCCACAAAATA
Product: cytoplasmic protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 339; Mature: 338
Protein sequence:
>339_residues MTASMASQYEKVGNRIAQYMKSLQPGDESLQEKLGVFLKKYEKAPLFIVGIDESVYAEWLRNPNPDAVKEFRLPFPTMVL DFPSGLLQKSANPRMSNSVIIYVDTVGEDTYLFEGLQTAEAFQNALDTAPVGEKDIITSAGCSLEAGEIGEPFSFVVQMI PETNGFVANYSCEFIYDCQVPVAPLPGITSYATFSRCQPPSGNCMTKTPLCKMLDSSTNFTIVFIMMVIEYINRQDRFIV KITPDMTDREKRLAAKGKKFSFSKKPAHIVLDHSQVRELIAASRQGGTHSSPLPHQRRGHWRRLQSDYFREKKKIWVRPA DINKGMSVKINRNVYEVIS
Sequences:
>Translated_339_residues MTASMASQYEKVGNRIAQYMKSLQPGDESLQEKLGVFLKKYEKAPLFIVGIDESVYAEWLRNPNPDAVKEFRLPFPTMVL DFPSGLLQKSANPRMSNSVIIYVDTVGEDTYLFEGLQTAEAFQNALDTAPVGEKDIITSAGCSLEAGEIGEPFSFVVQMI PETNGFVANYSCEFIYDCQVPVAPLPGITSYATFSRCQPPSGNCMTKTPLCKMLDSSTNFTIVFIMMVIEYINRQDRFIV KITPDMTDREKRLAAKGKKFSFSKKPAHIVLDHSQVRELIAASRQGGTHSSPLPHQRRGHWRRLQSDYFREKKKIWVRPA DINKGMSVKINRNVYEVIS >Mature_338_residues TASMASQYEKVGNRIAQYMKSLQPGDESLQEKLGVFLKKYEKAPLFIVGIDESVYAEWLRNPNPDAVKEFRLPFPTMVLD FPSGLLQKSANPRMSNSVIIYVDTVGEDTYLFEGLQTAEAFQNALDTAPVGEKDIITSAGCSLEAGEIGEPFSFVVQMIP ETNGFVANYSCEFIYDCQVPVAPLPGITSYATFSRCQPPSGNCMTKTPLCKMLDSSTNFTIVFIMMVIEYINRQDRFIVK ITPDMTDREKRLAAKGKKFSFSKKPAHIVLDHSQVRELIAASRQGGTHSSPLPHQRRGHWRRLQSDYFREKKKIWVRPAD INKGMSVKINRNVYEVIS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38220; Mature: 38089
Theoretical pI: Translated: 8.54; Mature: 8.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTASMASQYEKVGNRIAQYMKSLQPGDESLQEKLGVFLKKYEKAPLFIVGIDESVYAEWL CCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHH RNPNPDAVKEFRLPFPTMVLDFPSGLLQKSANPRMSNSVIIYVDTVGEDTYLFEGLQTAE CCCCCHHHHHHCCCCCHHHHHCCHHHHHCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHH AFQNALDTAPVGEKDIITSAGCSLEAGEIGEPFSFVVQMIPETNGFVANYSCEFIYDCQV HHHHHHCCCCCCCHHHHCCCCCCCCCCCCCCCHHHHHHHCCCCCCEEEEEEEEEEEECCC PVAPLPGITSYATFSRCQPPSGNCMTKTPLCKMLDSSTNFTIVFIMMVIEYINRQDRFIV CCCCCCCCCHHHHHHCCCCCCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHCCCCCEEE KITPDMTDREKRLAAKGKKFSFSKKPAHIVLDHSQVRELIAASRQGGTHSSPLPHQRRGH EECCCCCCHHHHHHHCCCCCCCCCCCCEEEECHHHHHHHHHHHCCCCCCCCCCCHHHHHH WRRLQSDYFREKKKIWVRPADINKGMSVKINRNVYEVIS HHHHHHHHHHHHHHEEEEECCCCCCCEEEECCCHHHHCC >Mature Secondary Structure TASMASQYEKVGNRIAQYMKSLQPGDESLQEKLGVFLKKYEKAPLFIVGIDESVYAEWL CCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHH RNPNPDAVKEFRLPFPTMVLDFPSGLLQKSANPRMSNSVIIYVDTVGEDTYLFEGLQTAE CCCCCHHHHHHCCCCCHHHHHCCHHHHHCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHH AFQNALDTAPVGEKDIITSAGCSLEAGEIGEPFSFVVQMIPETNGFVANYSCEFIYDCQV HHHHHHCCCCCCCHHHHCCCCCCCCCCCCCCCHHHHHHHCCCCCCEEEEEEEEEEEECCC PVAPLPGITSYATFSRCQPPSGNCMTKTPLCKMLDSSTNFTIVFIMMVIEYINRQDRFIV CCCCCCCCCHHHHHHCCCCCCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHCCCCCEEE KITPDMTDREKRLAAKGKKFSFSKKPAHIVLDHSQVRELIAASRQGGTHSSPLPHQRRGH EECCCCCCHHHHHHHCCCCCCCCCCCCEEEECHHHHHHHHHHHCCCCCCCCCCCHHHHHH WRRLQSDYFREKKKIWVRPADINKGMSVKINRNVYEVIS HHHHHHHHHHHHHHEEEEECCCCCCCEEEECCCHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA