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The map label for this gene is ompA [C]

Identifier: 85859515

GI number: 85859515

Start: 1739002

End: 1739682

Strand: Direct

Name: ompA [C]

Synonym: SYN_01857

Alternate gene names: 85859515

Gene position: 1739002-1739682 (Clockwise)

Preceding gene: 85859514

Following gene: 85859516

Centisome position: 54.7

GC content: 54.63

Gene sequence:

>681_bases
TTGGGTACTGGAGAAACCTCAATGGGATACCTGCGTCAACTTGCATTTTTCCTTTTCATTGCGATCATGCCTTGCATTTC
GGTTGCCATGGCGGCCGAGATCCGGACGAGCCCTTATAATTACGTCTATGAGAAAGCAGCAGCCAATTCCATTGACCACG
AGACCTTCGTCATTTGCGAGCTTTGTCCTCCGTACCGGCTCCTTGCCCTGAAACCCAGGACACCTGCCCTTGCCGTCCGT
GTACCGGAAGCAACGGCGTCGATCACCGCGGACGGTCCACCCACCGAAAAACAGACTGTCAGTGCGAAAGCAGGGAATAA
TTCATCGGCGGTCGACATTACCGGATCGAACAGGCCCGACCATGTTTGCGTGCCGACGATTTATTTCCGGTTCAACCGGT
TCGACGTTTCCAACTACGAAAAAGATCAACTCGATCGGCTTGTCTCCCGCCTGAAAGAACGACCCGATCGGCCCCGGGAA
CTCCGGGTCGTCGGCCACACCTGCGACCTGGGAAGCCATCCTTACAATGACCATCTATCCCTGATGAGGGCGGAGTCCGT
CGCGGTTTACCTGGGAAGAAACGGCTTCAAGGTTTCCGAGGCAAAGGGTGAAGGCAAGCGCAGCCCCGTATCGAAGGTCG
GAAAACTGAACAGGCGGGTGGAAATCGAAATCATTCATTAA

Upstream 100 bases:

>100_bases
ACAAAATCCCTGCATCGAAAACATTATATATCAGATGCGGGGGATCACATTCTGTCCTGACCTCTTAAATCTTCCCGCGA
TCTCAAAAACAATCTGAGCT

Downstream 100 bases:

>100_bases
GGAGGTCTCATGCTGCTGAAGAAGATCATGCCGGCCGTCATGGCCATGTTCCTGTGCGCCGCGGTTAGTCACGCCGAGGA
AAGCATCACGATCCAGATTT

Product: OmpA family outer membrane protein

Products: NA

Alternate protein names: OmpA/MotB Domain Protein; OmpA Domain-Containing Protein; OmpA Family Outer Membrane Protein

Number of amino acids: Translated: 226; Mature: 225

Protein sequence:

>226_residues
MGTGETSMGYLRQLAFFLFIAIMPCISVAMAAEIRTSPYNYVYEKAAANSIDHETFVICELCPPYRLLALKPRTPALAVR
VPEATASITADGPPTEKQTVSAKAGNNSSAVDITGSNRPDHVCVPTIYFRFNRFDVSNYEKDQLDRLVSRLKERPDRPRE
LRVVGHTCDLGSHPYNDHLSLMRAESVAVYLGRNGFKVSEAKGEGKRSPVSKVGKLNRRVEIEIIH

Sequences:

>Translated_226_residues
MGTGETSMGYLRQLAFFLFIAIMPCISVAMAAEIRTSPYNYVYEKAAANSIDHETFVICELCPPYRLLALKPRTPALAVR
VPEATASITADGPPTEKQTVSAKAGNNSSAVDITGSNRPDHVCVPTIYFRFNRFDVSNYEKDQLDRLVSRLKERPDRPRE
LRVVGHTCDLGSHPYNDHLSLMRAESVAVYLGRNGFKVSEAKGEGKRSPVSKVGKLNRRVEIEIIH
>Mature_225_residues
GTGETSMGYLRQLAFFLFIAIMPCISVAMAAEIRTSPYNYVYEKAAANSIDHETFVICELCPPYRLLALKPRTPALAVRV
PEATASITADGPPTEKQTVSAKAGNNSSAVDITGSNRPDHVCVPTIYFRFNRFDVSNYEKDQLDRLVSRLKERPDRPREL
RVVGHTCDLGSHPYNDHLSLMRAESVAVYLGRNGFKVSEAKGEGKRSPVSKVGKLNRRVEIEIIH

Specific function: Required For The Action Of Colicins K And L And For The Stabilization Of Mating Aggregates In Conjugation. Serves As A Receptor For A Number Of T-Even Like Phages. Also Acts As A Porin With Low Permeability That Allows Slow Penetration Of Small Solutes.

COG id: COG2885

COG function: function code M; Outer membrane protein and related peptidoglycan-associated (lipo)proteins

Gene ontology:

Cell location: Integral Membrane Protein. Outer Membrane [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 140 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 2300 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 3380 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 1480 Molecules/Cell In: Growth Phase, Mi

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25128; Mature: 24997

Theoretical pI: Translated: 8.92; Mature: 8.92

Prosite motif: PS51123 OMPA_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGTGETSMGYLRQLAFFLFIAIMPCISVAMAAEIRTSPYNYVYEKAAANSIDHETFVICE
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCEEEEEE
LCPPYRLLALKPRTPALAVRVPEATASITADGPPTEKQTVSAKAGNNSSAVDITGSNRPD
CCCCCEEEEECCCCCEEEEECCCCCEEEECCCCCCCCEEEEEECCCCCCEEEEECCCCCC
HVCVPTIYFRFNRFDVSNYEKDQLDRLVSRLKERPDRPRELRVVGHTCDLGSHPYNDHLS
EEEEEEEEEEEEEEECCCCCHHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCCCCCHHHH
LMRAESVAVYLGRNGFKVSEAKGEGKRSPVSKVGKLNRRVEIEIIH
HEECCEEEEEECCCCEEEECCCCCCCCCHHHHHHHCCCEEEEEEEC
>Mature Secondary Structure 
GTGETSMGYLRQLAFFLFIAIMPCISVAMAAEIRTSPYNYVYEKAAANSIDHETFVICE
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCEEEEEE
LCPPYRLLALKPRTPALAVRVPEATASITADGPPTEKQTVSAKAGNNSSAVDITGSNRPD
CCCCCEEEEECCCCCEEEEECCCCCEEEECCCCCCCCEEEEEECCCCCCEEEEECCCCCC
HVCVPTIYFRFNRFDVSNYEKDQLDRLVSRLKERPDRPRELRVVGHTCDLGSHPYNDHLS
EEEEEEEEEEEEEEECCCCCHHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCCCCCHHHH
LMRAESVAVYLGRNGFKVSEAKGEGKRSPVSKVGKLNRRVEIEIIH
HEECCEEEEEECCCCEEEECCCCCCCCCHHHHHHHCCCEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA