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The map label for this gene is ylbH [H]

Identifier: 85859442

GI number: 85859442

Start: 1646442

End: 1647014

Strand: Direct

Name: ylbH [H]

Synonym: SYN_00910

Alternate gene names: 85859442

Gene position: 1646442-1647014 (Clockwise)

Preceding gene: 85859441

Following gene: 85859443

Centisome position: 51.79

GC content: 49.56

Gene sequence:

>573_bases
ATGAGAATCATCGGGGGGCAGGCAAAAGGCAGACGCATTGCTGTCCCCCCGGGATATGCCGTCCGGCCGACATCCGACCG
GATCAAGGAAGCTCTGTTCAATATCCTGGGGCCGGTGGAGGGTCAAGAGTTTCTCGATCTTTACGCCGGAACCGGAAATG
TGGGAATGGAAGCACTGAGCCGTGGCGCCGACGTGGTTGTTTTTGTTGAAAAGATAAGCGTTCTCGTGACATCTCTCAAG
AGGAATCTTGAACAGTTCGGTTTCCAGGGACGGTACCGAATTTTTCGGATGGAAGTCGAAAAAGCCGTCGCACACCTGGC
TGAGGGTGGGATGTGTTTCGATTTGATCTTTGCAGATCCGCCATACAGAAAGGGGTTTGTTGACAGAACAATCGGCTTGA
TTAAAGATTACCCGTCAATTTTGAGGAAAGACGGCATGCTGGTTCTTCAGCACGCGGCGAATGAAACAATTGAAATAAAA
GAGGATATGGCACTGGATGTGGTCGACGTGAGGAGGTATGGGGATACCCTCCTGACATTTTTGAATATTCAAAATAAAGT
AGAAAGGGGATGA

Upstream 100 bases:

>100_bases
TTCCGAACGGTATCAACATGTGGGTCGTTGCCGATAATATTCGAAAGGGCGCGGCGACAAACGCCGTTCAAATCGCTGAG
GTCCTGATTCGGGATTATCT

Downstream 100 bases:

>100_bases
TATGAAGAAGATTGCTGTTTACCCCGGTTCTTTCGATCCTATTACGAATGGTCATCTCGATATCATTAAAAGGGGCTTGT
CGATGTTTGACGAGCTTATT

Product: adenine-specific methyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 190; Mature: 190

Protein sequence:

>190_residues
MRIIGGQAKGRRIAVPPGYAVRPTSDRIKEALFNILGPVEGQEFLDLYAGTGNVGMEALSRGADVVVFVEKISVLVTSLK
RNLEQFGFQGRYRIFRMEVEKAVAHLAEGGMCFDLIFADPPYRKGFVDRTIGLIKDYPSILRKDGMLVLQHAANETIEIK
EDMALDVVDVRRYGDTLLTFLNIQNKVERG

Sequences:

>Translated_190_residues
MRIIGGQAKGRRIAVPPGYAVRPTSDRIKEALFNILGPVEGQEFLDLYAGTGNVGMEALSRGADVVVFVEKISVLVTSLK
RNLEQFGFQGRYRIFRMEVEKAVAHLAEGGMCFDLIFADPPYRKGFVDRTIGLIKDYPSILRKDGMLVLQHAANETIEIK
EDMALDVVDVRRYGDTLLTFLNIQNKVERG
>Mature_190_residues
MRIIGGQAKGRRIAVPPGYAVRPTSDRIKEALFNILGPVEGQEFLDLYAGTGNVGMEALSRGADVVVFVEKISVLVTSLK
RNLEQFGFQGRYRIFRMEVEKAVAHLAEGGMCFDLIFADPPYRKGFVDRTIGLIKDYPSILRKDGMLVLQHAANETIEIK
EDMALDVVDVRRYGDTLLTFLNIQNKVERG

Specific function: May catalyze the S-adenosyl-L-methionine-dependent methylation of a specific base in rRNA (Potential) [H]

COG id: COG0742

COG function: function code L; N6-adenine-specific methylase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily. RsmD family [H]

Homologues:

Organism=Escherichia coli, GI1789875, Length=137, Percent_Identity=39.4160583941606, Blast_Score=102, Evalue=1e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004398 [H]

Pfam domain/function: PF03602 Cons_hypoth95 [H]

EC number: 2.1.1.- [C]

Molecular weight: Translated: 21235; Mature: 21235

Theoretical pI: Translated: 8.42; Mature: 8.42

Prosite motif: PS00092 N6_MTASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRIIGGQAKGRRIAVPPGYAVRPTSDRIKEALFNILGPVEGQEFLDLYAGTGNVGMEALS
CCEECCCCCCCEEECCCCCEECCCHHHHHHHHHHHHCCCCCHHHHHHHCCCCCHHHHHHH
RGADVVVFVEKISVLVTSLKRNLEQFGFQGRYRIFRMEVEKAVAHLAEGGMCFDLIFADP
CCCCEEEHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCC
PYRKGFVDRTIGLIKDYPSILRKDGMLVLQHAANETIEIKEDMALDVVDVRRYGDTLLTF
CCCCCHHHHHHHHHHHHHHHHHHCCEEEEEECCCCEEEECCCCHHHHHHHHHHHHHHHHH
LNIQNKVERG
HHHHHHHCCC
>Mature Secondary Structure
MRIIGGQAKGRRIAVPPGYAVRPTSDRIKEALFNILGPVEGQEFLDLYAGTGNVGMEALS
CCEECCCCCCCEEECCCCCEECCCHHHHHHHHHHHHCCCCCHHHHHHHCCCCCHHHHHHH
RGADVVVFVEKISVLVTSLKRNLEQFGFQGRYRIFRMEVEKAVAHLAEGGMCFDLIFADP
CCCCEEEHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCC
PYRKGFVDRTIGLIKDYPSILRKDGMLVLQHAANETIEIKEDMALDVVDVRRYGDTLLTF
CCCCCHHHHHHHHHHHHHHHHHHCCEEEEEECCCCEEEECCCCHHHHHHHHHHHHHHHHH
LNIQNKVERG
HHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Methyltransferases Protein + DNA = Protein-DNA [C]

General reaction: Transferring one-carbon groups [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]