| Definition | Syntrophus aciditrophicus SB chromosome, complete genome. |
|---|---|
| Accession | NC_007759 |
| Length | 3,179,300 |
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The map label for this gene is coaD
Identifier: 85859443
GI number: 85859443
Start: 1647016
End: 1647513
Strand: Direct
Name: coaD
Synonym: SYN_00909
Alternate gene names: 85859443
Gene position: 1647016-1647513 (Clockwise)
Preceding gene: 85859442
Following gene: 85859444
Centisome position: 51.8
GC content: 44.58
Gene sequence:
>498_bases ATGAAGAAGATTGCTGTTTACCCCGGTTCTTTCGATCCTATTACGAATGGTCATCTCGATATCATTAAAAGGGGCTTGTC GATGTTTGACGAGCTTATTGTCCTCATTGCATACAACGCAGCAAAGTCGTCTCTGTTTACTGTTCAGGAACGGATAGAAA TGATTCAGGAAGCACTCCATGACAGAAAAGGTGTCCGCGTCGACAGTTATGACGGTCTTCTGGTGGATTACGTCCGCAAA GAAGGGGGAAATGTCATTCTTCGGGGGCTGAGAGCCATGTCAGAGTTCGAATATGAGTTTCAGCTTGCTTTGATGAATCG TCGCCTGAATCGCAACATTGAAACGGTTTTCCTCATGACAGGCTATAAGTGGTTTTATACAAGCTCGACAATTATCAAAG AGGCCTCCCGCCTTGGAGGCTCTCCGAAAGGTCTTGTACCGGAGGTGGTTTTCAGAAAAATGCAGGAAAAATATCCACTA ATGAATAAGGGTAAATGA
Upstream 100 bases:
>100_bases ATAAAAGAGGATATGGCACTGGATGTGGTCGACGTGAGGAGGTATGGGGATACCCTCCTGACATTTTTGAATATTCAAAA TAAAGTAGAAAGGGGATGAT
Downstream 100 bases:
>100_bases TGATTATGAAACTGGCATCAAGAGTATCTATGATAAAACCTTCACCGACGCTGGTCATAACCGCAAAAGCCGGCGCCCTG CGTGCTGAGGGGCGGGATAT
Product: phosphopantetheine adenylyltransferase
Products: NA
Alternate protein names: Dephospho-CoA pyrophosphorylase; Pantetheine-phosphate adenylyltransferase; PPAT
Number of amino acids: Translated: 165; Mature: 165
Protein sequence:
>165_residues MKKIAVYPGSFDPITNGHLDIIKRGLSMFDELIVLIAYNAAKSSLFTVQERIEMIQEALHDRKGVRVDSYDGLLVDYVRK EGGNVILRGLRAMSEFEYEFQLALMNRRLNRNIETVFLMTGYKWFYTSSTIIKEASRLGGSPKGLVPEVVFRKMQEKYPL MNKGK
Sequences:
>Translated_165_residues MKKIAVYPGSFDPITNGHLDIIKRGLSMFDELIVLIAYNAAKSSLFTVQERIEMIQEALHDRKGVRVDSYDGLLVDYVRK EGGNVILRGLRAMSEFEYEFQLALMNRRLNRNIETVFLMTGYKWFYTSSTIIKEASRLGGSPKGLVPEVVFRKMQEKYPL MNKGK >Mature_165_residues MKKIAVYPGSFDPITNGHLDIIKRGLSMFDELIVLIAYNAAKSSLFTVQERIEMIQEALHDRKGVRVDSYDGLLVDYVRK EGGNVILRGLRAMSEFEYEFQLALMNRRLNRNIETVFLMTGYKWFYTSSTIIKEASRLGGSPKGLVPEVVFRKMQEKYPL MNKGK
Specific function: Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
COG id: COG0669
COG function: function code H; Phosphopantetheine adenylyltransferase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial CoaD family
Homologues:
Organism=Escherichia coli, GI1790065, Length=157, Percent_Identity=42.6751592356688, Blast_Score=150, Evalue=3e-38,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): COAD_SYNAS (Q2LTS1)
Other databases:
- EMBL: CP000252 - RefSeq: YP_461645.1 - HSSP: Q9WZK0 - ProteinModelPortal: Q2LTS1 - SMR: Q2LTS1 - STRING: Q2LTS1 - GeneID: 3883151 - GenomeReviews: CP000252_GR - KEGG: sat:SYN_00909 - NMPDR: fig|56780.10.peg.1588 - eggNOG: COG0669 - HOGENOM: HBG288308 - OMA: VRQIAAM - PhylomeDB: Q2LTS1 - ProtClustDB: CLSK2775543 - BioCyc: SACI56780:SYN_00909-MONOMER - GO: GO:0005737 - HAMAP: MF_00151 - InterPro: IPR004821 - InterPro: IPR004820 - InterPro: IPR001980 - InterPro: IPR014729 - Gene3D: G3DSA:3.40.50.620 - PRINTS: PR01020 - TIGRFAMs: TIGR01510 - TIGRFAMs: TIGR00125
Pfam domain/function: PF01467 CTP_transf_2
EC number: =2.7.7.3
Molecular weight: Translated: 18962; Mature: 18962
Theoretical pI: Translated: 9.96; Mature: 9.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.8 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.8 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKIAVYPGSFDPITNGHLDIIKRGLSMFDELIVLIAYNAAKSSLFTVQERIEMIQEALH CCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DRKGVRVDSYDGLLVDYVRKEGGNVILRGLRAMSEFEYEFQLALMNRRLNRNIETVFLMT HHCCCEECCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEE GYKWFYTSSTIIKEASRLGGSPKGLVPEVVFRKMQEKYPLMNKGK CCEEEECCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MKKIAVYPGSFDPITNGHLDIIKRGLSMFDELIVLIAYNAAKSSLFTVQERIEMIQEALH CCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DRKGVRVDSYDGLLVDYVRKEGGNVILRGLRAMSEFEYEFQLALMNRRLNRNIETVFLMT HHCCCEECCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEE GYKWFYTSSTIIKEASRLGGSPKGLVPEVVFRKMQEKYPLMNKGK CCEEEECCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA