| Definition | Syntrophus aciditrophicus SB chromosome, complete genome. |
|---|---|
| Accession | NC_007759 |
| Length | 3,179,300 |
Click here to switch to the map view.
The map label for this gene is 85859407
Identifier: 85859407
GI number: 85859407
Start: 1614226
End: 1614474
Strand: Direct
Name: 85859407
Synonym: SYN_02938
Alternate gene names: NA
Gene position: 1614226-1614474 (Clockwise)
Preceding gene: 85859403
Following gene: 85859408
Centisome position: 50.77
GC content: 49.8
Gene sequence:
>249_bases GTGCTGAAGAAAAAACACCGGGCTGTGGCACACTGCCACAGAACTCAGTGGGCTCAGGTGCTGCAGGAGGTGGAGGAACA TGAGGAACATTCCGACGAGGAGGCGCCGCCGAATGTTCCGCCGAAAACGGACATAAGTTTTTCAACCTGGTCTGAGCTGC AGTCGGGACAGAGAACTTCTCGTTTTTCAGAAATCGAAAAAAACAGGACTTCAAAAACCTTTTTGCACTGCCTGCATCGA AATTCATAA
Upstream 100 bases:
>100_bases TGGGAAAACACATCCGTGAATGGGACGCAAAAGATAAATGAAAACAGCTGATGAGGAATCGGATGAGAGGAGAGTGACAT ATCGGAAACAGGCTTAAGCG
Downstream 100 bases:
>100_bases ATCGGCATAAAAAGATACTCCAAAAGCGGTCTTGTTCAAAAAGCCCGGTCTTCCTCGCATGGAAGAGACCATGCCGTTAT TGAAAGCATGAAGTTTCATA
Product: cytoplasmic protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 82; Mature: 82
Protein sequence:
>82_residues MLKKKHRAVAHCHRTQWAQVLQEVEEHEEHSDEEAPPNVPPKTDISFSTWSELQSGQRTSRFSEIEKNRTSKTFLHCLHR NS
Sequences:
>Translated_82_residues MLKKKHRAVAHCHRTQWAQVLQEVEEHEEHSDEEAPPNVPPKTDISFSTWSELQSGQRTSRFSEIEKNRTSKTFLHCLHR NS >Mature_82_residues MLKKKHRAVAHCHRTQWAQVLQEVEEHEEHSDEEAPPNVPPKTDISFSTWSELQSGQRTSRFSEIEKNRTSKTFLHCLHR NS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9649; Mature: 9649
Theoretical pI: Translated: 7.71; Mature: 7.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLKKKHRAVAHCHRTQWAQVLQEVEEHEEHSDEEAPPNVPPKTDISFSTWSELQSGQRTS CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHCCHHHH RFSEIEKNRTSKTFLHCLHRNS HHHHHHHCCHHHHHHHHHHCCC >Mature Secondary Structure MLKKKHRAVAHCHRTQWAQVLQEVEEHEEHSDEEAPPNVPPKTDISFSTWSELQSGQRTS CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHCCHHHH RFSEIEKNRTSKTFLHCLHRNS HHHHHHHCCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA