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The map label for this gene is recN [H]

Identifier: 85859153

GI number: 85859153

Start: 1327914

End: 1329596

Strand: Direct

Name: recN [H]

Synonym: SYN_02862

Alternate gene names: 85859153

Gene position: 1327914-1329596 (Clockwise)

Preceding gene: 85859152

Following gene: 85859154

Centisome position: 41.77

GC content: 61.32

Gene sequence:

>1683_bases
ATGCTGGCGCAACTCAAGATTCGCAACTTCGCCCTGATCGACGCCCTGGATGTATCCTTCGACCGGGGGCTGAATATTCT
TTCCGGTGAAACCGGCGCGGGGAAGTCCATCATCATCGGCGCCATTGGACTTCTGCTGGGAGACCGGGCCTCAACGGAGA
TGATCCGCTCCGGGGCCGAAGCGGCGGAGGTGGAGGCTTTCTTCGATCTGGACGAAGGCGACCCCGTGCGGGAAAAGCTG
GCGGAGGCAGGCCTTGACGACGGCGAGGGGATGATTGTAAGGCGGGTGATGTCCCGTTCGGGCAGAAACCGGGTCTACAT
CAACGGCAGCATGGCGACCCTGAACCTCCTGGCCGACCTGGGCGAATCGCTGATGAACATCTGCGGTCAGCGGGAACATT
CAGTCATGTTGAATGCGGATCGTCATCTGGACATGCTGGATGCCTTCGGCGACCTGAATCCCCTTCGATCCGGCTACGGC
GCGTTGTACGAAACCCGGCAGGATCTTCTGGGACGCGTTGAAAAATTGACGGAGGCAAAAAACCGGCGCACGGAGCAGGA
AGAACTGGCCCGCTTTCAACTGGACGAAATCCATAAGGCAGCCGTGATCCCCGGTGAAGATGTCCGGCTGACCGCGGAAA
GGCAGGTGCTCCTTTCCGTGCAGAAGCTGATGGACGCCGCCGGGCAGGCCCATGAGCTCCTCTACGATCGCGGAGACTCC
GTTCTGGCGTCCCTGAAAAGCGTAATTTCCTGTGTGCGGGACATCCGGAAACTCGATGAATCTCTGAATCTCTCTGAAGC
GGAGCTGGACGCCCTGTATTATTCCCTGGAGGAAGCCGCCTTTACCCTGCGGGATTACCGGCAGCGACTCGTTCCGGACC
CCGGCAGGCTCGCTGGCATTGAAGAGCGGCTTGAAATCCTGGGGCGGCTGAAAAGAAAATATGGCGGCTCCCTTGATGGA
GTGCTGGAAAAGCAGGCGGAACTGGAAAATTCCCTGTCGGAGCTGTCCGGCCTGGAAGAGACTCTGGAGAAAGCCCAGGC
ATCGCTGCGGGAAATCGAAACCCGCATGAGAGAGAAGGCGGAAGAGCTTTCCGCGGCAAGGCGGCGGGCGGCGGCCGTGC
TGGAGCAGGCGATCGAGGAGGAGCTGCGCGGCCTGCGCATGGAGGCGGCGGACTTTGACGTCGTCTTTCAGGAGAGAGGA
GAAGAGGGCAATCCGCCATTCAATCCCCGGGGAATAGATCTGGTCGAGTTTTACCTTTCCGCCAACGCCGGAGAGGAGCC
GAAGCCGCTCAACCGCATTGCTTCCGGCGGGGAGCTGTCGCGCATCATCCTGGCGATGAAGAAGGTCCTGGCCCGGGCCG
GCGCCGTGGGCGTCATCGTTTTCGACGAAGTGGACAGCGGCATCGGCGGGGAGACGGCGGATCGCGTGGGAGACAGACTC
CGCGATGTGGCGCGCCATCATCAGGTGCTCTGCATCACCCATCTGCCCCAGATTGCCTGCTACGGGGAACGGCACTATCG
GGTAATCAAGGCGGCGGAAGGCGACCGGACGACAACCCGGATTGAACTTCTTTCCGATGAGGAGCGCCCGGAAGAAATCG
CCCGGATGCTTGGGGGGAGGGAAATGACGGAAACGACGAAGCGCCATGCCAGGGAAATGCTGGCCCGGGCGGCCGGGAGG
TAG

Upstream 100 bases:

>100_bases
ATGACCACCCTGGTTTCTTCTCAGAACCGGGATTATCTCGAAATCCTGCGATCCAAACTGGGATGGGGCCGACTGCCCGC
CATGAACCGATAAGCTCAGG

Downstream 100 bases:

>100_bases
GGAATGCTCAGAAAAGCAAGGATCAGCGATGTGAGAACGATTCATCGATTGATCAACATCTCTTCGGGAAAGGGGGAGAT
GCTGTCCCGTTCCCTCATGG

Product: DNA repair protein recN

Products: NA

Alternate protein names: Recombination protein N [H]

Number of amino acids: Translated: 560; Mature: 560

Protein sequence:

>560_residues
MLAQLKIRNFALIDALDVSFDRGLNILSGETGAGKSIIIGAIGLLLGDRASTEMIRSGAEAAEVEAFFDLDEGDPVREKL
AEAGLDDGEGMIVRRVMSRSGRNRVYINGSMATLNLLADLGESLMNICGQREHSVMLNADRHLDMLDAFGDLNPLRSGYG
ALYETRQDLLGRVEKLTEAKNRRTEQEELARFQLDEIHKAAVIPGEDVRLTAERQVLLSVQKLMDAAGQAHELLYDRGDS
VLASLKSVISCVRDIRKLDESLNLSEAELDALYYSLEEAAFTLRDYRQRLVPDPGRLAGIEERLEILGRLKRKYGGSLDG
VLEKQAELENSLSELSGLEETLEKAQASLREIETRMREKAEELSAARRRAAAVLEQAIEEELRGLRMEAADFDVVFQERG
EEGNPPFNPRGIDLVEFYLSANAGEEPKPLNRIASGGELSRIILAMKKVLARAGAVGVIVFDEVDSGIGGETADRVGDRL
RDVARHHQVLCITHLPQIACYGERHYRVIKAAEGDRTTTRIELLSDEERPEEIARMLGGREMTETTKRHAREMLARAAGR

Sequences:

>Translated_560_residues
MLAQLKIRNFALIDALDVSFDRGLNILSGETGAGKSIIIGAIGLLLGDRASTEMIRSGAEAAEVEAFFDLDEGDPVREKL
AEAGLDDGEGMIVRRVMSRSGRNRVYINGSMATLNLLADLGESLMNICGQREHSVMLNADRHLDMLDAFGDLNPLRSGYG
ALYETRQDLLGRVEKLTEAKNRRTEQEELARFQLDEIHKAAVIPGEDVRLTAERQVLLSVQKLMDAAGQAHELLYDRGDS
VLASLKSVISCVRDIRKLDESLNLSEAELDALYYSLEEAAFTLRDYRQRLVPDPGRLAGIEERLEILGRLKRKYGGSLDG
VLEKQAELENSLSELSGLEETLEKAQASLREIETRMREKAEELSAARRRAAAVLEQAIEEELRGLRMEAADFDVVFQERG
EEGNPPFNPRGIDLVEFYLSANAGEEPKPLNRIASGGELSRIILAMKKVLARAGAVGVIVFDEVDSGIGGETADRVGDRL
RDVARHHQVLCITHLPQIACYGERHYRVIKAAEGDRTTTRIELLSDEERPEEIARMLGGREMTETTKRHAREMLARAAGR
>Mature_560_residues
MLAQLKIRNFALIDALDVSFDRGLNILSGETGAGKSIIIGAIGLLLGDRASTEMIRSGAEAAEVEAFFDLDEGDPVREKL
AEAGLDDGEGMIVRRVMSRSGRNRVYINGSMATLNLLADLGESLMNICGQREHSVMLNADRHLDMLDAFGDLNPLRSGYG
ALYETRQDLLGRVEKLTEAKNRRTEQEELARFQLDEIHKAAVIPGEDVRLTAERQVLLSVQKLMDAAGQAHELLYDRGDS
VLASLKSVISCVRDIRKLDESLNLSEAELDALYYSLEEAAFTLRDYRQRLVPDPGRLAGIEERLEILGRLKRKYGGSLDG
VLEKQAELENSLSELSGLEETLEKAQASLREIETRMREKAEELSAARRRAAAVLEQAIEEELRGLRMEAADFDVVFQERG
EEGNPPFNPRGIDLVEFYLSANAGEEPKPLNRIASGGELSRIILAMKKVLARAGAVGVIVFDEVDSGIGGETADRVGDRL
RDVARHHQVLCITHLPQIACYGERHYRVIKAAEGDRTTTRIELLSDEERPEEIARMLGGREMTETTKRHAREMLARAAGR

Specific function: May be involved in recombinational repair of damaged DNA [H]

COG id: COG0497

COG function: function code L; ATPase involved in DNA repair

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the recN family [H]

Homologues:

Organism=Escherichia coli, GI48994901, Length=558, Percent_Identity=34.0501792114695, Blast_Score=288, Evalue=6e-79,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004604
- InterPro:   IPR003395 [H]

Pfam domain/function: PF02463 SMC_N [H]

EC number: NA

Molecular weight: Translated: 62088; Mature: 62088

Theoretical pI: Translated: 4.79; Mature: 4.79

Prosite motif: PS00422 GRANINS_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLAQLKIRNFALIDALDVSFDRGLNILSGETGAGKSIIIGAIGLLLGDRASTEMIRSGAE
CCCEEEECCCHHHHHHHHHHHHCCCEECCCCCCCCHHHHHHHHHHHCCCHHHHHHHCCCC
AAEVEAFFDLDEGDPVREKLAEAGLDDGEGMIVRRVMSRSGRNRVYINGSMATLNLLADL
HHHHHHHEECCCCCHHHHHHHHCCCCCCCHHHHHHHHHCCCCCEEEEECCHHHHHHHHHH
GESLMNICGQREHSVMLNADRHLDMLDAFGDLNPLRSGYGALYETRQDLLGRVEKLTEAK
HHHHHHHHCCCCCCEEECCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
NRRTEQEELARFQLDEIHKAAVIPGEDVRLTAERQVLLSVQKLMDAAGQAHELLYDRGDS
HCCCCHHHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHHHHHHCCHHHHHHHHCCHH
VLASLKSVISCVRDIRKLDESLNLSEAELDALYYSLEEAAFTLRDYRQRLVPDPGRLAGI
HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCH
EERLEILGRLKRKYGGSLDGVLEKQAELENSLSELSGLEETLEKAQASLREIETRMREKA
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EELSAARRRAAAVLEQAIEEELRGLRMEAADFDVVFQERGEEGNPPFNPRGIDLVEFYLS
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCCCCCCHHHHHHHH
ANAGEEPKPLNRIASGGELSRIILAMKKVLARAGAVGVIVFDEVDSGIGGETADRVGDRL
CCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCHHHHHHHHH
RDVARHHQVLCITHLPQIACYGERHYRVIKAAEGDRTTTRIELLSDEERPEEIARMLGGR
HHHHHHCCEEEEECCCHHHHCCCHHEEEEEECCCCCCHHEEEECCCCCCHHHHHHHHCCC
EMTETTKRHAREMLARAAGR
HHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MLAQLKIRNFALIDALDVSFDRGLNILSGETGAGKSIIIGAIGLLLGDRASTEMIRSGAE
CCCEEEECCCHHHHHHHHHHHHCCCEECCCCCCCCHHHHHHHHHHHCCCHHHHHHHCCCC
AAEVEAFFDLDEGDPVREKLAEAGLDDGEGMIVRRVMSRSGRNRVYINGSMATLNLLADL
HHHHHHHEECCCCCHHHHHHHHCCCCCCCHHHHHHHHHCCCCCEEEEECCHHHHHHHHHH
GESLMNICGQREHSVMLNADRHLDMLDAFGDLNPLRSGYGALYETRQDLLGRVEKLTEAK
HHHHHHHHCCCCCCEEECCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
NRRTEQEELARFQLDEIHKAAVIPGEDVRLTAERQVLLSVQKLMDAAGQAHELLYDRGDS
HCCCCHHHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHHHHHHCCHHHHHHHHCCHH
VLASLKSVISCVRDIRKLDESLNLSEAELDALYYSLEEAAFTLRDYRQRLVPDPGRLAGI
HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCH
EERLEILGRLKRKYGGSLDGVLEKQAELENSLSELSGLEETLEKAQASLREIETRMREKA
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EELSAARRRAAAVLEQAIEEELRGLRMEAADFDVVFQERGEEGNPPFNPRGIDLVEFYLS
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCCCCCCHHHHHHHH
ANAGEEPKPLNRIASGGELSRIILAMKKVLARAGAVGVIVFDEVDSGIGGETADRVGDRL
CCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCHHHHHHHHH
RDVARHHQVLCITHLPQIACYGERHYRVIKAAEGDRTTTRIELLSDEERPEEIARMLGGR
HHHHHHCCEEEEECCCHHHHCCCHHEEEEEECCCCCCHHEEEECCCCCCHHHHHHHHCCC
EMTETTKRHAREMLARAAGR
HHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11058132 [H]