| Definition | Syntrophus aciditrophicus SB chromosome, complete genome. |
|---|---|
| Accession | NC_007759 |
| Length | 3,179,300 |
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The map label for this gene is ahcY [H]
Identifier: 85859084
GI number: 85859084
Start: 1258864
End: 1260423
Strand: Direct
Name: ahcY [H]
Synonym: SYN_00416
Alternate gene names: 85859084
Gene position: 1258864-1260423 (Clockwise)
Preceding gene: 85859083
Following gene: 85859087
Centisome position: 39.6
GC content: 53.33
Gene sequence:
>1560_bases ATGGGGAGAAGTACAGGAAACTGCCGAAGACGCTTTTCCTTGATGACTACCCCTGGGAAAAAACGGACATGGTGGATTCA CTCAAAAAGGCCGCTGACATATAAGCGCGGCCAGGCCAATGCGAAGGAGAAATACATGGAATTTCTGGAGATTGACGGTT TACTGCCCTATCGGGTAGCCGACCTTTCCCTGGCGGAATGGGGATGGAAGGAGATGGCCCTGGCGGAGAATGAAATGCCG GGACTGATGGCTGTGCGCGAGAAGTATGGGGATCAGAAGCCTCTGGCGGGCTTCAAGGTCATGGGCAGCCTCCATATGAC CATTCAGACGGCGATGTTGATCGAGACTCTTAAAATTCTGGGTGCGGATATCCGCTGGGCCTCTTGCAATATCTTTTCGA CGCAGGATCATGCCGCTGCGGCGATCGCGAAATCAGGAACGGCGGCAGTTTTTGCCTGGAAGGGTGAAACGCTGGAAGAG TACTGGTGGTGCACCGAACAGGCCTTGACCTGGCCGGACGGCAGCGGTCCCGATCTTATCGTCGATGACGGAGGGGATGC CACCCTGTTTATTCATCAGGGCGCACGTATTGAAAAGGAGTCCGATCTTCTGGATAAAAGGCAGGACAACAAAGAGATGC AGATTATCATGGATCGACTGAAAAAATCCTTTGCCAGAGACTCAAATCGATGGACTCGGGTGGCCGCAGCGGTTCGCGGG GTATCTGAAGAAACGACAACGGGAGTGCATCGCCTTTACCAGATGGCCAAAGCCGGGGAACTTCTCTTTCCAGCCATTAA TGTGAATGATTCCGTGACGAAGTCGAAATTTGACAATCTTTACGGTTGCCGGGAATCCCTGGCCGACGGGATCAAGCGGG CGACGGATATCATGGTTGCTGGCAAGGTTGTTGTCGTCTGCGGATACGGCGATGTCGGGAAGGGTTGTGTCCAGTCGATG CGGGGATTCGGCGCCCGCGTCATTGTAACCGAAGTTGACCCGATCTGCGCGTTGCAGGCCGCCATGGAGGGATATGAGGT AAAAACCCTGGAAGACGTGGTTGAAGAAGGGGATATATTCGTCACAGCCACCGGCTGTTGTGACGTTATCACCGGCGAGC ACATGGAGCGCATGAAAAATGAAGCCATTGTCTGCAATATCGGTCATTTCGACAGTGAAATCGCCATGCACTACCTCGAG GGAAATCCGGCCTGCAAAAAGGAATCCATCAAACCTCAGGTCGATAAATGGACCCTGGCATCGGGACGCTCCATTATCAT GCTGGCTGAGGGCCGCCTTGTCAATCTGGGCTGTGCGACGGGTCATCCCAGTTTTGTCATGAGCAACAGCTTTACCAATC AGTGTCTGGCGCAGATTGAGCTGGCCGGCAAGAATTACAAGCCGGGTGTTTACACCCTGCCGAAGAAGCTTGATGAAGAA GTGGCCAGGCTTCATCTCGGGCGTCTTGGTGTGAAATTGACACGGCTTACTCCAAAACAGGCCGAATATCTCGGCATATC CGTCGAGGGTCCTTATAAGGCTGAACATTATCGTTACTGA
Upstream 100 bases:
>100_bases TTCGGGACAGGGGTCATATCCGATAACAAGATAGGAACGATCGTCAGAGAATACTTTGATCTGTCACCGCGGGGCATGAT TGAGCGATTCAATCTCCTGG
Downstream 100 bases:
>100_bases TTTATTGATGATCGGAAAAGCCTATGCTCCCGCGCCCGTTGCATTCAAAAGCAGGCCATCATCAGTGCGGGCGGGGAGAA GGCGCATGGGAGGGTGCGGT
Product: S-adenosyl-L-homocysteine hydrolase
Products: NA
Alternate protein names: S-adenosyl-L-homocysteine hydrolase; AdoHcyase [H]
Number of amino acids: Translated: 519; Mature: 518
Protein sequence:
>519_residues MGRSTGNCRRRFSLMTTPGKKRTWWIHSKRPLTYKRGQANAKEKYMEFLEIDGLLPYRVADLSLAEWGWKEMALAENEMP GLMAVREKYGDQKPLAGFKVMGSLHMTIQTAMLIETLKILGADIRWASCNIFSTQDHAAAAIAKSGTAAVFAWKGETLEE YWWCTEQALTWPDGSGPDLIVDDGGDATLFIHQGARIEKESDLLDKRQDNKEMQIIMDRLKKSFARDSNRWTRVAAAVRG VSEETTTGVHRLYQMAKAGELLFPAINVNDSVTKSKFDNLYGCRESLADGIKRATDIMVAGKVVVVCGYGDVGKGCVQSM RGFGARVIVTEVDPICALQAAMEGYEVKTLEDVVEEGDIFVTATGCCDVITGEHMERMKNEAIVCNIGHFDSEIAMHYLE GNPACKKESIKPQVDKWTLASGRSIIMLAEGRLVNLGCATGHPSFVMSNSFTNQCLAQIELAGKNYKPGVYTLPKKLDEE VARLHLGRLGVKLTRLTPKQAEYLGISVEGPYKAEHYRY
Sequences:
>Translated_519_residues MGRSTGNCRRRFSLMTTPGKKRTWWIHSKRPLTYKRGQANAKEKYMEFLEIDGLLPYRVADLSLAEWGWKEMALAENEMP GLMAVREKYGDQKPLAGFKVMGSLHMTIQTAMLIETLKILGADIRWASCNIFSTQDHAAAAIAKSGTAAVFAWKGETLEE YWWCTEQALTWPDGSGPDLIVDDGGDATLFIHQGARIEKESDLLDKRQDNKEMQIIMDRLKKSFARDSNRWTRVAAAVRG VSEETTTGVHRLYQMAKAGELLFPAINVNDSVTKSKFDNLYGCRESLADGIKRATDIMVAGKVVVVCGYGDVGKGCVQSM RGFGARVIVTEVDPICALQAAMEGYEVKTLEDVVEEGDIFVTATGCCDVITGEHMERMKNEAIVCNIGHFDSEIAMHYLE GNPACKKESIKPQVDKWTLASGRSIIMLAEGRLVNLGCATGHPSFVMSNSFTNQCLAQIELAGKNYKPGVYTLPKKLDEE VARLHLGRLGVKLTRLTPKQAEYLGISVEGPYKAEHYRY >Mature_518_residues GRSTGNCRRRFSLMTTPGKKRTWWIHSKRPLTYKRGQANAKEKYMEFLEIDGLLPYRVADLSLAEWGWKEMALAENEMPG LMAVREKYGDQKPLAGFKVMGSLHMTIQTAMLIETLKILGADIRWASCNIFSTQDHAAAAIAKSGTAAVFAWKGETLEEY WWCTEQALTWPDGSGPDLIVDDGGDATLFIHQGARIEKESDLLDKRQDNKEMQIIMDRLKKSFARDSNRWTRVAAAVRGV SEETTTGVHRLYQMAKAGELLFPAINVNDSVTKSKFDNLYGCRESLADGIKRATDIMVAGKVVVVCGYGDVGKGCVQSMR GFGARVIVTEVDPICALQAAMEGYEVKTLEDVVEEGDIFVTATGCCDVITGEHMERMKNEAIVCNIGHFDSEIAMHYLEG NPACKKESIKPQVDKWTLASGRSIIMLAEGRLVNLGCATGHPSFVMSNSFTNQCLAQIELAGKNYKPGVYTLPKKLDEEV ARLHLGRLGVKLTRLTPKQAEYLGISVEGPYKAEHYRY
Specific function: May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine [H]
COG id: COG0499
COG function: function code H; S-adenosylhomocysteine hydrolase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the adenosylhomocysteinase family [H]
Homologues:
Organism=Homo sapiens, GI9951915, Length=467, Percent_Identity=61.4561027837259, Blast_Score=562, Evalue=1e-160, Organism=Homo sapiens, GI239937451, Length=443, Percent_Identity=61.3995485327314, Blast_Score=530, Evalue=1e-150, Organism=Homo sapiens, GI298286489, Length=466, Percent_Identity=47.2103004291845, Blast_Score=430, Evalue=1e-120, Organism=Homo sapiens, GI195539337, Length=466, Percent_Identity=47.2103004291845, Blast_Score=430, Evalue=1e-120, Organism=Homo sapiens, GI24308043, Length=466, Percent_Identity=47.2103004291845, Blast_Score=430, Evalue=1e-120, Organism=Homo sapiens, GI195539349, Length=466, Percent_Identity=47.2103004291845, Blast_Score=429, Evalue=1e-120, Organism=Homo sapiens, GI21361647, Length=466, Percent_Identity=46.3519313304721, Blast_Score=414, Evalue=1e-115, Organism=Caenorhabditis elegans, GI17506425, Length=468, Percent_Identity=60.2564102564103, Blast_Score=572, Evalue=1e-163, Organism=Saccharomyces cerevisiae, GI6320882, Length=480, Percent_Identity=58.5416666666667, Blast_Score=533, Evalue=1e-152, Organism=Drosophila melanogaster, GI24642172, Length=465, Percent_Identity=61.7204301075269, Blast_Score=563, Evalue=1e-160, Organism=Drosophila melanogaster, GI24656245, Length=456, Percent_Identity=47.3684210526316, Blast_Score=419, Evalue=1e-117, Organism=Drosophila melanogaster, GI45553387, Length=465, Percent_Identity=48.8172043010753, Blast_Score=418, Evalue=1e-117, Organism=Drosophila melanogaster, GI45553385, Length=464, Percent_Identity=49.1379310344828, Blast_Score=416, Evalue=1e-116,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000043 - InterPro: IPR015878 - InterPro: IPR020082 [H]
Pfam domain/function: PF05221 AdoHcyase; PF00670 AdoHcyase_NAD [H]
EC number: =3.3.1.1 [H]
Molecular weight: Translated: 57680; Mature: 57549
Theoretical pI: Translated: 7.44; Mature: 7.44
Prosite motif: PS00738 ADOHCYASE_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 6.4 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 6.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGRSTGNCRRRFSLMTTPGKKRTWWIHSKRPLTYKRGQANAKEKYMEFLEIDGLLPYRVA CCCCCCCHHHEEEEEECCCCCEEEEEECCCCCEECCCCCCHHHHHHHHHHHCCCCCEEEE DLSLAEWGWKEMALAENEMPGLMAVREKYGDQKPLAGFKVMGSLHMTIQTAMLIETLKIL CCCHHHCCCHHHHHHCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH GADIRWASCNIFSTQDHAAAAIAKSGTAAVFAWKGETLEEYWWCTEQALTWPDGSGPDLI CCCCEEEEEEEECCCCHHHHHHHCCCCEEEEEECCCCHHHHHCCHHCEEECCCCCCCEEE VDDGGDATLFIHQGARIEKESDLLDKRQDNKEMQIIMDRLKKSFARDSNRWTRVAAAVRG EECCCCEEEEEECCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHC VSEETTTGVHRLYQMAKAGELLFPAINVNDSVTKSKFDNLYGCRESLADGIKRATDIMVA CCCHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEE GKVVVVCGYGDVGKGCVQSMRGFGARVIVTEVDPICALQAAMEGYEVKTLEDVVEEGDIF CEEEEEECCCCCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHCCCCHHHHHHHHHCCCEE VTATGCCDVITGEHMERMKNEAIVCNIGHFDSEIAMHYLEGNPACKKESIKPQVDKWTLA EEECCCHHHHCCHHHHHHCCCEEEEECCCCCCCHHEEEECCCCCCCCCCCCCCCCEEEEC SGRSIIMLAEGRLVNLGCATGHPSFVMSNSFTNQCLAQIELAGKNYKPGVYTLPKKLDEE CCCEEEEEECCEEEEEEECCCCCCEEEECCHHHHHHHHHHCCCCCCCCCCEECHHHHHHH VARLHLGRLGVKLTRLTPKQAEYLGISVEGPYKAEHYRY HHHHHHHHCCEEEEECCCCCCCEEEEEECCCCCCCCCCC >Mature Secondary Structure GRSTGNCRRRFSLMTTPGKKRTWWIHSKRPLTYKRGQANAKEKYMEFLEIDGLLPYRVA CCCCCCHHHEEEEEECCCCCEEEEEECCCCCEECCCCCCHHHHHHHHHHHCCCCCEEEE DLSLAEWGWKEMALAENEMPGLMAVREKYGDQKPLAGFKVMGSLHMTIQTAMLIETLKIL CCCHHHCCCHHHHHHCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH GADIRWASCNIFSTQDHAAAAIAKSGTAAVFAWKGETLEEYWWCTEQALTWPDGSGPDLI CCCCEEEEEEEECCCCHHHHHHHCCCCEEEEEECCCCHHHHHCCHHCEEECCCCCCCEEE VDDGGDATLFIHQGARIEKESDLLDKRQDNKEMQIIMDRLKKSFARDSNRWTRVAAAVRG EECCCCEEEEEECCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHC VSEETTTGVHRLYQMAKAGELLFPAINVNDSVTKSKFDNLYGCRESLADGIKRATDIMVA CCCHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEE GKVVVVCGYGDVGKGCVQSMRGFGARVIVTEVDPICALQAAMEGYEVKTLEDVVEEGDIF CEEEEEECCCCCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHCCCCHHHHHHHHHCCCEE VTATGCCDVITGEHMERMKNEAIVCNIGHFDSEIAMHYLEGNPACKKESIKPQVDKWTLA EEECCCHHHHCCHHHHHHCCCEEEEECCCCCCCHHEEEECCCCCCCCCCCCCCCCEEEEC SGRSIIMLAEGRLVNLGCATGHPSFVMSNSFTNQCLAQIELAGKNYKPGVYTLPKKLDEE CCCEEEEEECCEEEEEEECCCCCCEEEECCHHHHHHHHHHCCCCCCCCCCEECHHHHHHH VARLHLGRLGVKLTRLTPKQAEYLGISVEGPYKAEHYRY HHHHHHHHCCEEEEECCCCCCCEEEEEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA