| Definition | Syntrophus aciditrophicus SB chromosome, complete genome. |
|---|---|
| Accession | NC_007759 |
| Length | 3,179,300 |
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The map label for this gene is 85859087
Identifier: 85859087
GI number: 85859087
Start: 1262995
End: 1263579
Strand: Direct
Name: 85859087
Synonym: SYN_03192
Alternate gene names: NA
Gene position: 1262995-1263579 (Clockwise)
Preceding gene: 85859084
Following gene: 85859088
Centisome position: 39.73
GC content: 53.68
Gene sequence:
>585_bases TTGATCGATCTTCACACACATACCATCCACAGCGATGGCGAGTTCCTGCCGTCCGAGCTTGTGAGGAGGGCGAGGGTCGT GGGATATCGTGCCATGGCCTTGACGGATCACGGCGACCATTCAAATCTGGAACTGATTCTTCCAGGAATTGTCAGGGTTT GCAAAAAGCTTTCGAAAGCTTATGATATGCCCGTGATTCCCGGGATCGAACTGACCCACGTTCCACCCGAATACATCATG GAACTTGTACAGGAAGCAAGGGGGATGGGGGCGGGAATCGTCGTTGTTCATGGAGAAACCATTGCCGAGCCGGTTTTGCC GGGAACAAACCTGGCGGCGCTCCAGGCATCCGTGGATATTCTGGCTCATCCGGGATTAATAGGCGAAGAAGAGGCTCTCA TGGCTTCCCGCAATGCCGTCTGTCTGGAGATCACGACCAGAAAGGGGCACTCTCTGACGAACGGTCATGTAGCAAAAATG GCCAGGCATTATCATTTTCCTCTGGTGCTGGATACGGACAGTCATGATTCCCATGATTTGACTTCACTGGAGAAGGCGGA AAAATCGCCCGGGGGGCGGGCATGA
Upstream 100 bases:
>100_bases GTTGACCGGGGAAACCGATGATGTTAAAAAGTGAACCTTCTTTTCCTGAAGGACAGGGCTTGATGAAAAAATATATTAAA TTTTCTGGAGAGGCATTATC
Downstream 100 bases:
>100_bases CTGAAGAAGAAATCCTGATCATGTTCAGAAATTCGGAAAATCTCGTAAAGCGGTTTATGGGTTGAGGAGAAATTTTTGAT TTGTCCTCATACCTTATTCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 194; Mature: 194
Protein sequence:
>194_residues MIDLHTHTIHSDGEFLPSELVRRARVVGYRAMALTDHGDHSNLELILPGIVRVCKKLSKAYDMPVIPGIELTHVPPEYIM ELVQEARGMGAGIVVVHGETIAEPVLPGTNLAALQASVDILAHPGLIGEEEALMASRNAVCLEITTRKGHSLTNGHVAKM ARHYHFPLVLDTDSHDSHDLTSLEKAEKSPGGRA
Sequences:
>Translated_194_residues MIDLHTHTIHSDGEFLPSELVRRARVVGYRAMALTDHGDHSNLELILPGIVRVCKKLSKAYDMPVIPGIELTHVPPEYIM ELVQEARGMGAGIVVVHGETIAEPVLPGTNLAALQASVDILAHPGLIGEEEALMASRNAVCLEITTRKGHSLTNGHVAKM ARHYHFPLVLDTDSHDSHDLTSLEKAEKSPGGRA >Mature_194_residues MIDLHTHTIHSDGEFLPSELVRRARVVGYRAMALTDHGDHSNLELILPGIVRVCKKLSKAYDMPVIPGIELTHVPPEYIM ELVQEARGMGAGIVVVHGETIAEPVLPGTNLAALQASVDILAHPGLIGEEEALMASRNAVCLEITTRKGHSLTNGHVAKM ARHYHFPLVLDTDSHDSHDLTSLEKAEKSPGGRA
Specific function: Unknown
COG id: COG1387
COG function: function code ER; Histidinol phosphatase and related hydrolases of the PHP family
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004013 - InterPro: IPR003141 - InterPro: IPR016195 [H]
Pfam domain/function: PF02811 PHP [H]
EC number: NA
Molecular weight: Translated: 21033; Mature: 21033
Theoretical pI: Translated: 6.39; Mature: 6.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIDLHTHTIHSDGEFLPSELVRRARVVGYRAMALTDHGDHSNLELILPGIVRVCKKLSKA CCCCCEEEECCCCCCCHHHHHHHHHHHHHEEEEEECCCCCCCCEEEHHHHHHHHHHHHHH YDMPVIPGIELTHVPPEYIMELVQEARGMGAGIVVVHGETIAEPVLPGTNLAALQASVDI CCCCCCCCCEECCCCHHHHHHHHHHHCCCCCCEEEECCCHHHHCCCCCCCHHHHHHHHHH LAHPGLIGEEEALMASRNAVCLEITTRKGHSLTNGHVAKMARHYHFPLVLDTDSHDSHDL HCCCCCCCCHHHHHHCCCCEEEEEECCCCCCCCCCHHHHHHHHHCCCEEEECCCCCCCCH TSLEKAEKSPGGRA HHHHHHHCCCCCCC >Mature Secondary Structure MIDLHTHTIHSDGEFLPSELVRRARVVGYRAMALTDHGDHSNLELILPGIVRVCKKLSKA CCCCCEEEECCCCCCCHHHHHHHHHHHHHEEEEEECCCCCCCCEEEHHHHHHHHHHHHHH YDMPVIPGIELTHVPPEYIMELVQEARGMGAGIVVVHGETIAEPVLPGTNLAALQASVDI CCCCCCCCCEECCCCHHHHHHHHHHHCCCCCCEEEECCCHHHHCCCCCCCHHHHHHHHHH LAHPGLIGEEEALMASRNAVCLEITTRKGHSLTNGHVAKMARHYHFPLVLDTDSHDSHDL HCCCCCCCCHHHHHHCCCCEEEEEECCCCCCCCCCHHHHHHHHHCCCEEEECCCCCCCCH TSLEKAEKSPGGRA HHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]