| Definition | Syntrophus aciditrophicus SB chromosome, complete genome. |
|---|---|
| Accession | NC_007759 |
| Length | 3,179,300 |
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The map label for this gene is panC [H]
Identifier: 85859080
GI number: 85859080
Start: 1255470
End: 1256348
Strand: Direct
Name: panC [H]
Synonym: SYN_00420
Alternate gene names: 85859080
Gene position: 1255470-1256348 (Clockwise)
Preceding gene: 85859079
Following gene: 85859081
Centisome position: 39.49
GC content: 50.4
Gene sequence:
>879_bases GTGGGGACTATACGACCGATGAAGATCATTCACGCGGTTCACGAGATGCAGGACTATTCCGAAGCTCTGAGGAAGGCAGG CAGGAGGATCGCCTTTGTTCCGACGATGGGCTATTTTCACGAAGGTCATCTCGACCTGATGCGTGAAGGCAGAAAAAGAT CAGACTGTCTGGTCGTCAGCATTTACGTAAACCCGACCCAGTTCGGCGCCAGTGAAGATCTGGAAAAGTATCCACGAAAC TTCGACCGGGACAGCCAATTGGCGGAAGAAGTCGGCGTGGATGTCATTTTCTTTCCCTCCAATGCCGAAATGTACCCGGT AAACTACCAGACTTATGTCACTGTGGAAGAAGTGACAAAAAATCTCTGCGGTCTGTCCAGACCGGGACATTTTCGGGGCG TTGCCACTGTATGCGCCAAACTGTTCAACATGGTTAAACCTCATGCGGCGATCTTCGGTAAAAAAGATTTTCAGCAACTG GTGACGATAAAACGGATGGTTGCTGATTTGAATATGGATCTTGAAATCGTCGGCATGCCGACAACAAGAGAAAAAGACGG GCTTGCCATGAGTTCCCGTAATGTTTATCTCAGCCCGGAGGAAAGGGAATCGGCCCTCTGTCTGAGCCGATCACTGCTGA TGGCACGGGAGCGATATGATCAGGGGGAACGGGATGCCGGGCGGATACTGCAATCGATCAAAGCCTATATCGAAAGCGTT CCCTCCACGCGAATCGATTATCTGAAAATCTGCAGTACGACGACCATGCAGGATGTTCAGAGCCTGGATCAGGAGTCCGT TCTGGCGCTTGCCGTATTTGTCGGTTCCACGAGACTTATAGACAATCACGTGTTCGGTGAAGAGCTGAACATCAGATAA
Upstream 100 bases:
>100_bases TCACCGCTTGGATCCGCTGAAGGACTGAGACGGAAGGCACAGGAAGAACGAAATTTCAAGGGATTATAGCCTCCCCGTCC AGAATGGGGAGGCTTTTTTT
Downstream 100 bases:
>100_bases AAAAGAAATCACGACATCGGACAGGAACGCGCTTCTGTGCCGAGGGGAAGGTGAATCCATGCAAAGGTTGATGCTTAAAT CCAAAATTCACAGAGCGACC
Product: pantoate--beta-alanine ligase
Products: NA
Alternate protein names: PS; Pantoate--beta-alanine ligase; Pantoate-activating enzyme [H]
Number of amino acids: Translated: 292; Mature: 291
Protein sequence:
>292_residues MGTIRPMKIIHAVHEMQDYSEALRKAGRRIAFVPTMGYFHEGHLDLMREGRKRSDCLVVSIYVNPTQFGASEDLEKYPRN FDRDSQLAEEVGVDVIFFPSNAEMYPVNYQTYVTVEEVTKNLCGLSRPGHFRGVATVCAKLFNMVKPHAAIFGKKDFQQL VTIKRMVADLNMDLEIVGMPTTREKDGLAMSSRNVYLSPEERESALCLSRSLLMARERYDQGERDAGRILQSIKAYIESV PSTRIDYLKICSTTTMQDVQSLDQESVLALAVFVGSTRLIDNHVFGEELNIR
Sequences:
>Translated_292_residues MGTIRPMKIIHAVHEMQDYSEALRKAGRRIAFVPTMGYFHEGHLDLMREGRKRSDCLVVSIYVNPTQFGASEDLEKYPRN FDRDSQLAEEVGVDVIFFPSNAEMYPVNYQTYVTVEEVTKNLCGLSRPGHFRGVATVCAKLFNMVKPHAAIFGKKDFQQL VTIKRMVADLNMDLEIVGMPTTREKDGLAMSSRNVYLSPEERESALCLSRSLLMARERYDQGERDAGRILQSIKAYIESV PSTRIDYLKICSTTTMQDVQSLDQESVLALAVFVGSTRLIDNHVFGEELNIR >Mature_291_residues GTIRPMKIIHAVHEMQDYSEALRKAGRRIAFVPTMGYFHEGHLDLMREGRKRSDCLVVSIYVNPTQFGASEDLEKYPRNF DRDSQLAEEVGVDVIFFPSNAEMYPVNYQTYVTVEEVTKNLCGLSRPGHFRGVATVCAKLFNMVKPHAAIFGKKDFQQLV TIKRMVADLNMDLEIVGMPTTREKDGLAMSSRNVYLSPEERESALCLSRSLLMARERYDQGERDAGRILQSIKAYIESVP STRIDYLKICSTTTMQDVQSLDQESVLALAVFVGSTRLIDNHVFGEELNIR
Specific function: Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate [H]
COG id: COG0414
COG function: function code H; Panthothenate synthetase
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the pantothenate synthetase family [H]
Homologues:
Organism=Escherichia coli, GI1786325, Length=280, Percent_Identity=43.5714285714286, Blast_Score=235, Evalue=3e-63, Organism=Saccharomyces cerevisiae, GI6322046, Length=312, Percent_Identity=37.1794871794872, Blast_Score=174, Evalue=2e-44,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004821 - InterPro: IPR003721 - InterPro: IPR014729 [H]
Pfam domain/function: PF02569 Pantoate_ligase [H]
EC number: =6.3.2.1 [H]
Molecular weight: Translated: 33132; Mature: 33000
Theoretical pI: Translated: 6.63; Mature: 6.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGTIRPMKIIHAVHEMQDYSEALRKAGRRIAFVPTMGYFHEGHLDLMREGRKRSDCLVVS CCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCHHHHHCCCCCCCEEEEE IYVNPTQFGASEDLEKYPRNFDRDSQLAEEVGVDVIFFPSNAEMYPVNYQTYVTVEEVTK EEECCHHCCCCHHHHHCCCCCCHHHHHHHHHCCEEEEECCCCEEEECCCEEEEEHHHHHH NLCGLSRPGHFRGVATVCAKLFNMVKPHAAIFGKKDFQQLVTIKRMVADLNMDLEIVGMP HHHCCCCCCCHHHHHHHHHHHHHHHCCHHHHHCHHHHHHHHHHHHHHHHCCCCEEEEECC TTREKDGLAMSSRNVYLSPEERESALCLSRSLLMARERYDQGERDAGRILQSIKAYIESV CCCCCCCCEECCCCEEECCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHC PSTRIDYLKICSTTTMQDVQSLDQESVLALAVFVGSTRLIDNHVFGEELNIR CCCHHHHHHHHCCHHHHHHHHCCHHHHHHHHHHHCCHHHHHCCCCCCCCCCC >Mature Secondary Structure GTIRPMKIIHAVHEMQDYSEALRKAGRRIAFVPTMGYFHEGHLDLMREGRKRSDCLVVS CCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCHHHHHCCCCCCCEEEEE IYVNPTQFGASEDLEKYPRNFDRDSQLAEEVGVDVIFFPSNAEMYPVNYQTYVTVEEVTK EEECCHHCCCCHHHHHCCCCCCHHHHHHHHHCCEEEEECCCCEEEECCCEEEEEHHHHHH NLCGLSRPGHFRGVATVCAKLFNMVKPHAAIFGKKDFQQLVTIKRMVADLNMDLEIVGMP HHHCCCCCCCHHHHHHHHHHHHHHHCCHHHHHCHHHHHHHHHHHHHHHHCCCCEEEEECC TTREKDGLAMSSRNVYLSPEERESALCLSRSLLMARERYDQGERDAGRILQSIKAYIESV CCCCCCCCEECCCCEEECCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHC PSTRIDYLKICSTTTMQDVQSLDQESVLALAVFVGSTRLIDNHVFGEELNIR CCCHHHHHHHHCCHHHHHHHHCCHHHHHHHHHHHCCHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA