| Definition | Syntrophus aciditrophicus SB chromosome, complete genome. |
|---|---|
| Accession | NC_007759 |
| Length | 3,179,300 |
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The map label for this gene is cheY [H]
Identifier: 85859041
GI number: 85859041
Start: 1217704
End: 1218084
Strand: Direct
Name: cheY [H]
Synonym: SYN_00962
Alternate gene names: 85859041
Gene position: 1217704-1218084 (Clockwise)
Preceding gene: 85859040
Following gene: 85859042
Centisome position: 38.3
GC content: 45.41
Gene sequence:
>381_bases ATGGATAAAAGTATACGAATATTGATCGTAGATGATTTTGCGACAATGAGAAAGGTTATACGTAATCTTTTGAAGCAGGT GGGATACGAAAATATTGTGGAGGCCGAGGACGGGGCGATTGCTCTGAGAACCCTGAAGGCTCAGAAAGTGGATTTTGTCA TTTCCGACTGGAATATGCCCAATATGAGTGGCCTGGAGCTGTTGAAGGCTGTTCGGGCAGACGAAGAATTGAATGCAACG CCTTTTTTGATGGTCACTGCCGAGGCGCTTCAGGAAAATGTCATCGCCGCCGTGAAAGCGGGCGTAAGCAACTATATTGT CAAGCCGTTTACCGCAGAGGTCCTGAATTCAAAAATAGAAAAAATCCTGGGAAGTCTTTAG
Upstream 100 bases:
>100_bases AAATTTTGGAGAAGGGGAAAGCCGCTGATTTCGGAATGCCTGAACTGAAAATTGGATAAAAGTATAAAATATTTTTAATT TATGATCACCGGAGGATAGC
Downstream 100 bases:
>100_bases AGGGTTGATCCGGAGAGCGTGATGTCAATTATTTGTATTTAATTACTGAGTTCCTACTCTTAAGAATAAAAGGATGCCTA ATGGATGTTCGATTCATCAA
Product: chemotaxis protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 126; Mature: 126
Protein sequence:
>126_residues MDKSIRILIVDDFATMRKVIRNLLKQVGYENIVEAEDGAIALRTLKAQKVDFVISDWNMPNMSGLELLKAVRADEELNAT PFLMVTAEALQENVIAAVKAGVSNYIVKPFTAEVLNSKIEKILGSL
Sequences:
>Translated_126_residues MDKSIRILIVDDFATMRKVIRNLLKQVGYENIVEAEDGAIALRTLKAQKVDFVISDWNMPNMSGLELLKAVRADEELNAT PFLMVTAEALQENVIAAVKAGVSNYIVKPFTAEVLNSKIEKILGSL >Mature_126_residues MDKSIRILIVDDFATMRKVIRNLLKQVGYENIVEAEDGAIALRTLKAQKVDFVISDWNMPNMSGLELLKAVRADEELNAT PFLMVTAEALQENVIAAVKAGVSNYIVKPFTAEVLNSKIEKILGSL
Specific function: Involved in the transmission of sensory signals from the chemoreceptors to the flagellar motors. In its active (phosphorylated or acetylated) form, CheY exhibits enhanced binding to a switch component, FliM, at the flagellar motor which induces a change f
COG id: COG0784
COG function: function code T; FOG: CheY-like receiver
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 response regulatory domain [H]
Homologues:
Organism=Escherichia coli, GI1788191, Length=125, Percent_Identity=60, Blast_Score=160, Evalue=2e-41, Organism=Escherichia coli, GI1786599, Length=118, Percent_Identity=31.3559322033898, Blast_Score=75, Evalue=2e-15, Organism=Escherichia coli, GI1788550, Length=118, Percent_Identity=33.8983050847458, Blast_Score=68, Evalue=1e-13, Organism=Escherichia coli, GI145693157, Length=114, Percent_Identity=35.9649122807018, Blast_Score=68, Evalue=2e-13, Organism=Escherichia coli, GI1790437, Length=121, Percent_Identity=35.5371900826446, Blast_Score=66, Evalue=7e-13, Organism=Escherichia coli, GI1788713, Length=122, Percent_Identity=32.7868852459016, Blast_Score=64, Evalue=4e-12, Organism=Escherichia coli, GI1788521, Length=111, Percent_Identity=36.036036036036, Blast_Score=63, Evalue=5e-12, Organism=Escherichia coli, GI1788905, Length=121, Percent_Identity=33.0578512396694, Blast_Score=60, Evalue=4e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011006 - InterPro: IPR001789 [H]
Pfam domain/function: PF00072 Response_reg [H]
EC number: NA
Molecular weight: Translated: 13950; Mature: 13950
Theoretical pI: Translated: 4.91; Mature: 4.91
Prosite motif: PS50110 RESPONSE_REGULATORY
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDKSIRILIVDDFATMRKVIRNLLKQVGYENIVEAEDGAIALRTLKAQKVDFVISDWNMP CCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEHHHHHHHEEEEEECCCCC NMSGLELLKAVRADEELNATPFLMVTAEALQENVIAAVKAGVSNYIVKPFTAEVLNSKIE CCHHHHHHHHHHCCCCCCCCCHHEEEHHHHHHHHHHHHHHCHHHHHCCCHHHHHHHHHHH KILGSL HHHCCC >Mature Secondary Structure MDKSIRILIVDDFATMRKVIRNLLKQVGYENIVEAEDGAIALRTLKAQKVDFVISDWNMP CCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEHHHHHHHEEEEEECCCCC NMSGLELLKAVRADEELNATPFLMVTAEALQENVIAAVKAGVSNYIVKPFTAEVLNSKIE CCHHHHHHHHHHCCCCCCCCCHHEEEHHHHHHHHHHHHHHCHHHHHCCCHHHHHHHHHHH KILGSL HHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]