| Definition | Syntrophus aciditrophicus SB chromosome, complete genome. |
|---|---|
| Accession | NC_007759 |
| Length | 3,179,300 |
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The map label for this gene is cheX [H]
Identifier: 85859042
GI number: 85859042
Start: 1218117
End: 1218635
Strand: Direct
Name: cheX [H]
Synonym: SYN_00961
Alternate gene names: 85859042
Gene position: 1218117-1218635 (Clockwise)
Preceding gene: 85859041
Following gene: 85859046
Centisome position: 38.31
GC content: 48.36
Gene sequence:
>519_bases TTGTATTTAATTACTGAGTTCCTACTCTTAAGAATAAAAGGATGCCTAATGGATGTTCGATTCATCAATCCCTTTTTGGA TGCTACAGAGAATGTGTTGAGAACAATGGCGTTTGTTGAGCCGAAGGTGGGTAAACCCTATTTGAAAAAAGATAATGCGG CAAAGGGGGATATTTCAGGAATCATCGGGTTGACCGGTGACCTCAGGGGATCTCTGGGGTTGAGTTTCAGCGAAGCCTGC ATTGTCAGAATCGTTTCCAACATGCTTGGGGAATCCTTGACGGGGATCGATAACGACGTCAAGGATGCCGTCGGGGAGAT CACCAACATGATCTCGGGTGTTGCCAGAAAAAAGCTGGAGTCGGAGGGATTCAGTATCACGGCGGCCATTCCAACCGTAG TGGCCGGTAAAAGCCACTCCATTGTCCATGTTCTGGGCGGGCCGAGCATCATTATCCCTTTTGAGATCGAGGAAGGGCCC TTTGTTGTGGATGTCTGTCTTGGAAACGGTCCTACCTGA
Upstream 100 bases:
>100_bases ATATTGTCAAGCCGTTTACCGCAGAGGTCCTGAATTCAAAAATAGAAAAAATCCTGGGAAGTCTTTAGAGGGTTGATCCG GAGAGCGTGATGTCAATTAT
Downstream 100 bases:
>100_bases AATACCATGAAATATAAGCAATACATGAAACGTTGTTCTGTTACTTTGGCTGGATGACAATAATGCTGATCCTCCTGTTG CGGGCATCCATGGGGTTCTG
Product: inhibitor of MCP methylation
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 172; Mature: 172
Protein sequence:
>172_residues MYLITEFLLLRIKGCLMDVRFINPFLDATENVLRTMAFVEPKVGKPYLKKDNAAKGDISGIIGLTGDLRGSLGLSFSEAC IVRIVSNMLGESLTGIDNDVKDAVGEITNMISGVARKKLESEGFSITAAIPTVVAGKSHSIVHVLGGPSIIIPFEIEEGP FVVDVCLGNGPT
Sequences:
>Translated_172_residues MYLITEFLLLRIKGCLMDVRFINPFLDATENVLRTMAFVEPKVGKPYLKKDNAAKGDISGIIGLTGDLRGSLGLSFSEAC IVRIVSNMLGESLTGIDNDVKDAVGEITNMISGVARKKLESEGFSITAAIPTVVAGKSHSIVHVLGGPSIIIPFEIEEGP FVVDVCLGNGPT >Mature_172_residues MYLITEFLLLRIKGCLMDVRFINPFLDATENVLRTMAFVEPKVGKPYLKKDNAAKGDISGIIGLTGDLRGSLGLSFSEAC IVRIVSNMLGESLTGIDNDVKDAVGEITNMISGVARKKLESEGFSITAAIPTVVAGKSHSIVHVLGGPSIIIPFEIEEGP FVVDVCLGNGPT
Specific function: Involved in restoring normal CheY-P levels by dephosphorylating CheY-P. It has a greater activity than CheC [H]
COG id: COG1406
COG function: function code N; Predicted inhibitor of MCP methylation, homolog of CheC
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CheC family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007597 [H]
Pfam domain/function: PF04509 CheC [H]
EC number: NA
Molecular weight: Translated: 18309; Mature: 18309
Theoretical pI: Translated: 4.97; Mature: 4.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYLITEFLLLRIKGCLMDVRFINPFLDATENVLRTMAFVEPKVGKPYLKKDNAAKGDISG CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCE IIGLTGDLRGSLGLSFSEACIVRIVSNMLGESLTGIDNDVKDAVGEITNMISGVARKKLE EEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH SEGFSITAAIPTVVAGKSHSIVHVLGGPSIIIPFEIEEGPFVVDVCLGNGPT CCCCEEEEECCCEECCCCCCEEEEECCCEEEEEEEECCCCEEEEEECCCCCC >Mature Secondary Structure MYLITEFLLLRIKGCLMDVRFINPFLDATENVLRTMAFVEPKVGKPYLKKDNAAKGDISG CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCE IIGLTGDLRGSLGLSFSEACIVRIVSNMLGESLTGIDNDVKDAVGEITNMISGVARKKLE EEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH SEGFSITAAIPTVVAGKSHSIVHVLGGPSIIIPFEIEEGPFVVDVCLGNGPT CCCCEEEEECCCEECCCCCCEEEEECCCEEEEEEEECCCCEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10360571 [H]