| Definition | Syntrophus aciditrophicus SB chromosome, complete genome. |
|---|---|
| Accession | NC_007759 |
| Length | 3,179,300 |
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The map label for this gene is cheA [H]
Identifier: 85859040
GI number: 85859040
Start: 1215388
End: 1217595
Strand: Direct
Name: cheA [H]
Synonym: SYN_00963
Alternate gene names: 85859040
Gene position: 1215388-1217595 (Clockwise)
Preceding gene: 85859039
Following gene: 85859041
Centisome position: 38.23
GC content: 45.92
Gene sequence:
>2208_bases ATGAATTATGAAACCCTGTTGAAGTCAATTGATTGCATGGCGTCAGATTTTCTCTTTCTTGACAGCGGAGATATGGATGT GCCGACGACAGGAAAATTTCTCAACCATCTGGAAAATGTCGCAAGAGAGGCATTGAACTTAAATATCATGCCCATTCAGG AAGTAGGAAGGGGATTGAATTCGATTCTTGAATGCATCATCCTGGATTCAATAGAAGACAAAGAAGCGGCGATTCTGACC TTCGAACAGGGGATCGCACTGTTGCAGGAGATCGTGAACGTAGAGAAAAACCAGGGAAAGTATCAAGGGGATATTCGTGG TTATCTGGAGCGAATTGCTTTTGTTACAGGGACTTCCATATCCTCATCCGATAAGGAAATAGTTGACGAGGTTCAAGCCT CGAAGGAGAAAATAACGGCTGCGGGTGCTTCCGAAGAGTTTCTGATTCAGGACGAATCCCTGTTGCGGGATTTCATTGCG GAAGGGATGGAGTACGTTGAAGAGATTGAAGTCAATATCTTAAATCTGGAAAACAATCCGGAAAACAGGGACTATATCAA CGCAATTTTTCGTCCTTTTCATTCCATCAAGGGGGTTGCCAGCTTTCTGAATCTGGAGAAGATCAGAGAACTTTCCCACA ATATCGAGAGTCTTCTCGATAAAGCCAGAAACGGAGAACACAGCGTCACGCCGCCATTGATCGATGTTGTACTGGATGGC GCCGACGCTCTTAAAAGCATGATATCCCGGCTGAAAGAAGCGCTTGAAGGAAAAAAAGAAAATCCTCTCGACGTCGATCT GTCTGCCCTTGAAATGCGAATACATAATATCAACAAGGGCATTGAGCAGGAACCTTCCGTAAAAAAACTGGGGGAAATTC TGATAGATGACGGAGTGCTCTCTGAGCAGATGCTGGAAGAAGGTTTAAAGGCGAAAGAAAATAATCCGGAAAAGAGGCTG GGAGAAACACTGATTAAAGAAAGAGCTGTGACACCGAAGCAGGTTTCTCAGGCTCTCAGAAAACAGGCCGAGCAGATTAC GGATATGTCCACAATAAGAGTGGATACACGAAAGCTCGATGATCTCATCGATATGGTCGGAGAGCTTGTGATTACTCAAT CCATGGTGCAGCAGAATATCAGCAATCAGGAAAACGGGAACAAGGATCTGGCAAGGAATGTTTCACAACTGTTCCGTATT ACGTCAAACTTACAGAAGGTATCTACCAGTCTTCGAATGATCCCGATTAAACAGACTTTTCAGCGAATGGCGCGACTTGC CAGAGATGTTTCCAAAAATGTCGGGAAAGCTGTTGTCGTTGAAATGGAGGGAGAAGACACGGAGCTGGATCGAAATATGG TCGATGAAATTTATAATCCCCTGGTTCATATGATTCGTAATTCCGTTGATCATGGGCTGGAAACACCTGAGGAGCGAGTG AGATGCGGGAAGCCGGAAAAAGGGCTGATTCAGTTGAAGGCCTATCATCGTGGCGGAAACTTCGTGATTGAAATATCCGA TGATGGCCGAGGCTTAAACAGGGAGAAAATTTTGAAAAAGGCCATTCAAAACCATCTCGTCAACAGTGTTGAAGGCCTGA CGGACCAGGAAATTTATCGTATGATTTTCCTGCCTGGTTTTTCCACCGCTGAAAAAGTGACTGATGTTTCGGGGCGCGGT GTCGGCATGGATGTGGTGAGGCAGACCATTGAAAAACTGCGGGGCAAGATTGAAATTGAAAGCATCCCGGGAAAAGGCAC GACCTTCATTACTCGCTTTCCGTTAACAATGGCCATTATTGACGGAATGATCGTCAAAGTAGGCAAGGAGCGGTTTATTC TGCCTACTACGGCAATACGTCAGGTTCTCAGGCCGACTCGGGAATCGCATAACCATATTGTGGGACAGGGAGAAACGGTA AATGTGATGGGGCGGCTTATGCCCCTGGTTCGAGTTTATGATCTCTTCGATATTGAGCCGGAAAAGGTGGATCCCTGGGA TGCCATTGTGATTGTTGTCGATGGGGCCAGCCGTTCCAAATGTCTGCTTGTGGATCAGATCATCGGCAAAGCGGAAGTTG TGATTAAAAGCCTGGGTGAAGGATTAAAGGATATAGATGGAATATCGGGCGGCGCCATCATGGGCGATGGTCAGATCGGT CTGATTATTGATCCGGAAGGGTTGTTTGAACTTAGTGAACACTGTTGA
Upstream 100 bases:
>100_bases TTGTTTATGGAATGCCCAAGGAAGCCGTGAAAATAGGGGCGGTTGATAAAATCGTTCATCTTGATTCGATTGCTGATGAA ATTGTGAGGATGGTGTAGCG
Downstream 100 bases:
>100_bases GCGGTTAAAAATTTTGGAGAAGGGGAAAGCCGCTGATTTCGGAATGCCTGAACTGAAAATTGGATAAAAGTATAAAATAT TTTTAATTTATGATCACCGG
Product: chemotaxis protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 735; Mature: 735
Protein sequence:
>735_residues MNYETLLKSIDCMASDFLFLDSGDMDVPTTGKFLNHLENVAREALNLNIMPIQEVGRGLNSILECIILDSIEDKEAAILT FEQGIALLQEIVNVEKNQGKYQGDIRGYLERIAFVTGTSISSSDKEIVDEVQASKEKITAAGASEEFLIQDESLLRDFIA EGMEYVEEIEVNILNLENNPENRDYINAIFRPFHSIKGVASFLNLEKIRELSHNIESLLDKARNGEHSVTPPLIDVVLDG ADALKSMISRLKEALEGKKENPLDVDLSALEMRIHNINKGIEQEPSVKKLGEILIDDGVLSEQMLEEGLKAKENNPEKRL GETLIKERAVTPKQVSQALRKQAEQITDMSTIRVDTRKLDDLIDMVGELVITQSMVQQNISNQENGNKDLARNVSQLFRI TSNLQKVSTSLRMIPIKQTFQRMARLARDVSKNVGKAVVVEMEGEDTELDRNMVDEIYNPLVHMIRNSVDHGLETPEERV RCGKPEKGLIQLKAYHRGGNFVIEISDDGRGLNREKILKKAIQNHLVNSVEGLTDQEIYRMIFLPGFSTAEKVTDVSGRG VGMDVVRQTIEKLRGKIEIESIPGKGTTFITRFPLTMAIIDGMIVKVGKERFILPTTAIRQVLRPTRESHNHIVGQGETV NVMGRLMPLVRVYDLFDIEPEKVDPWDAIVIVVDGASRSKCLLVDQIIGKAEVVIKSLGEGLKDIDGISGGAIMGDGQIG LIIDPEGLFELSEHC
Sequences:
>Translated_735_residues MNYETLLKSIDCMASDFLFLDSGDMDVPTTGKFLNHLENVAREALNLNIMPIQEVGRGLNSILECIILDSIEDKEAAILT FEQGIALLQEIVNVEKNQGKYQGDIRGYLERIAFVTGTSISSSDKEIVDEVQASKEKITAAGASEEFLIQDESLLRDFIA EGMEYVEEIEVNILNLENNPENRDYINAIFRPFHSIKGVASFLNLEKIRELSHNIESLLDKARNGEHSVTPPLIDVVLDG ADALKSMISRLKEALEGKKENPLDVDLSALEMRIHNINKGIEQEPSVKKLGEILIDDGVLSEQMLEEGLKAKENNPEKRL GETLIKERAVTPKQVSQALRKQAEQITDMSTIRVDTRKLDDLIDMVGELVITQSMVQQNISNQENGNKDLARNVSQLFRI TSNLQKVSTSLRMIPIKQTFQRMARLARDVSKNVGKAVVVEMEGEDTELDRNMVDEIYNPLVHMIRNSVDHGLETPEERV RCGKPEKGLIQLKAYHRGGNFVIEISDDGRGLNREKILKKAIQNHLVNSVEGLTDQEIYRMIFLPGFSTAEKVTDVSGRG VGMDVVRQTIEKLRGKIEIESIPGKGTTFITRFPLTMAIIDGMIVKVGKERFILPTTAIRQVLRPTRESHNHIVGQGETV NVMGRLMPLVRVYDLFDIEPEKVDPWDAIVIVVDGASRSKCLLVDQIIGKAEVVIKSLGEGLKDIDGISGGAIMGDGQIG LIIDPEGLFELSEHC >Mature_735_residues MNYETLLKSIDCMASDFLFLDSGDMDVPTTGKFLNHLENVAREALNLNIMPIQEVGRGLNSILECIILDSIEDKEAAILT FEQGIALLQEIVNVEKNQGKYQGDIRGYLERIAFVTGTSISSSDKEIVDEVQASKEKITAAGASEEFLIQDESLLRDFIA EGMEYVEEIEVNILNLENNPENRDYINAIFRPFHSIKGVASFLNLEKIRELSHNIESLLDKARNGEHSVTPPLIDVVLDG ADALKSMISRLKEALEGKKENPLDVDLSALEMRIHNINKGIEQEPSVKKLGEILIDDGVLSEQMLEEGLKAKENNPEKRL GETLIKERAVTPKQVSQALRKQAEQITDMSTIRVDTRKLDDLIDMVGELVITQSMVQQNISNQENGNKDLARNVSQLFRI TSNLQKVSTSLRMIPIKQTFQRMARLARDVSKNVGKAVVVEMEGEDTELDRNMVDEIYNPLVHMIRNSVDHGLETPEERV RCGKPEKGLIQLKAYHRGGNFVIEISDDGRGLNREKILKKAIQNHLVNSVEGLTDQEIYRMIFLPGFSTAEKVTDVSGRG VGMDVVRQTIEKLRGKIEIESIPGKGTTFITRFPLTMAIIDGMIVKVGKERFILPTTAIRQVLRPTRESHNHIVGQGETV NVMGRLMPLVRVYDLFDIEPEKVDPWDAIVIVVDGASRSKCLLVDQIIGKAEVVIKSLGEGLKDIDGISGGAIMGDGQIG LIIDPEGLFELSEHC
Specific function: Involved in the transmission of sensory signals from the chemoreceptors to the flagellar motors. CheA is autophosphorylated; it can transfer its phosphate group to either CheB or CheY [H]
COG id: COG0643
COG function: function code NT; Chemotaxis protein histidine kinase and related kinases
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 HPt domain [H]
Homologues:
Organism=Escherichia coli, GI1788197, Length=391, Percent_Identity=45.0127877237852, Blast_Score=336, Evalue=3e-93,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR002545 - InterPro: IPR015162 - InterPro: IPR004358 - InterPro: IPR008207 - InterPro: IPR004105 - InterPro: IPR005467 - InterPro: IPR009082 [H]
Pfam domain/function: PF01584 CheW; PF09078 CheY-binding; PF02895 H-kinase_dim; PF02518 HATPase_c; PF01627 Hpt [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 81964; Mature: 81964
Theoretical pI: Translated: 4.72; Mature: 4.72
Prosite motif: PS50851 CHEW ; PS50894 HPT ; PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNYETLLKSIDCMASDFLFLDSGDMDVPTTGKFLNHLENVAREALNLNIMPIQEVGRGLN CCHHHHHHHHHHHHHCEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHH SILECIILDSIEDKEAAILTFEQGIALLQEIVNVEKNQGKYQGDIRGYLERIAFVTGTSI HHHHHHHHCCCCCCCCEEEEHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCC SSSDKEIVDEVQASKEKITAAGASEEFLIQDESLLRDFIAEGMEYVEEIEVNILNLENNP CCCHHHHHHHHHHHHHHHHHCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHEEEECCCCC ENRDYINAIFRPFHSIKGVASFLNLEKIRELSHNIESLLDKARNGEHSVTPPLIDVVLDG CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCC ADALKSMISRLKEALEGKKENPLDVDLSALEMRIHNINKGIEQEPSVKKLGEILIDDGVL HHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCHH SEQMLEEGLKAKENNPEKRLGETLIKERAVTPKQVSQALRKQAEQITDMSTIRVDTRKLD HHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHEEHHHHHH DLIDMVGELVITQSMVQQNISNQENGNKDLARNVSQLFRITSNLQKVSTSLRMIPIKQTF HHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEHHHHH QRMARLARDVSKNVGKAVVVEMEGEDTELDRNMVDEIYNPLVHMIRNSVDHGLETPEERV HHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH RCGKPEKGLIQLKAYHRGGNFVIEISDDGRGLNREKILKKAIQNHLVNSVEGLTDQEIYR HCCCCCCCEEEEEEEECCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHH MIFLPGFSTAEKVTDVSGRGVGMDVVRQTIEKLRGKIEIESIPGKGTTFITRFPLTMAII HHCCCCCCHHHHHHCCCCCCCCHHHHHHHHHHHCCEEEEEECCCCCCEEEEEHHHHHHHH DGMIVKVGKERFILPTTAIRQVLRPTRESHNHIVGQGETVNVMGRLMPLVRVYDLFDIEP HHHHHHCCCCCEECCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCC EKVDPWDAIVIVVDGASRSKCLLVDQIIGKAEVVIKSLGEGLKDIDGISGGAIMGDGQIG CCCCCCCEEEEEEECCCCCCEEHHHHHHHHHHHHHHHHHCHHHHHCCCCCCEEECCCCEE LIIDPEGLFELSEHC EEECCHHHHHHHCCC >Mature Secondary Structure MNYETLLKSIDCMASDFLFLDSGDMDVPTTGKFLNHLENVAREALNLNIMPIQEVGRGLN CCHHHHHHHHHHHHHCEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHH SILECIILDSIEDKEAAILTFEQGIALLQEIVNVEKNQGKYQGDIRGYLERIAFVTGTSI HHHHHHHHCCCCCCCCEEEEHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCC SSSDKEIVDEVQASKEKITAAGASEEFLIQDESLLRDFIAEGMEYVEEIEVNILNLENNP CCCHHHHHHHHHHHHHHHHHCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHEEEECCCCC ENRDYINAIFRPFHSIKGVASFLNLEKIRELSHNIESLLDKARNGEHSVTPPLIDVVLDG CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCC ADALKSMISRLKEALEGKKENPLDVDLSALEMRIHNINKGIEQEPSVKKLGEILIDDGVL HHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCHH SEQMLEEGLKAKENNPEKRLGETLIKERAVTPKQVSQALRKQAEQITDMSTIRVDTRKLD HHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHEEHHHHHH DLIDMVGELVITQSMVQQNISNQENGNKDLARNVSQLFRITSNLQKVSTSLRMIPIKQTF HHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEHHHHH QRMARLARDVSKNVGKAVVVEMEGEDTELDRNMVDEIYNPLVHMIRNSVDHGLETPEERV HHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH RCGKPEKGLIQLKAYHRGGNFVIEISDDGRGLNREKILKKAIQNHLVNSVEGLTDQEIYR HCCCCCCCEEEEEEEECCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHH MIFLPGFSTAEKVTDVSGRGVGMDVVRQTIEKLRGKIEIESIPGKGTTFITRFPLTMAII HHCCCCCCHHHHHHCCCCCCCCHHHHHHHHHHHCCEEEEEECCCCCCEEEEEHHHHHHHH DGMIVKVGKERFILPTTAIRQVLRPTRESHNHIVGQGETVNVMGRLMPLVRVYDLFDIEP HHHHHHCCCCCEECCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCC EKVDPWDAIVIVVDGASRSKCLLVDQIIGKAEVVIKSLGEGLKDIDGISGGAIMGDGQIG CCCCCCCEEEEEEECCCCCCEEHHHHHHHHHHHHHHHHHCHHHHHCCCCCCEEECCCCEE LIIDPEGLFELSEHC EEECCHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 3278311; 11677609 [H]