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The map label for this gene is cheD2

Identifier: 85859038

GI number: 85859038

Start: 1213839

End: 1214357

Strand: Direct

Name: cheD2

Synonym: SYN_00965

Alternate gene names: 85859038

Gene position: 1213839-1214357 (Clockwise)

Preceding gene: 85859037

Following gene: 85859039

Centisome position: 38.18

GC content: 45.47

Gene sequence:

>519_bases
ATGAACAGTAAAGCAATAAAACCCTCTTGCGAGTATTTTCTTCTGCCCGGCTATATTTTTATGAGTCCGGAGCCTTACCT
GATTTCAACGGTAGTCGGTTCTTCCGTGGCTGTGGCACTTTGGGATGCCGACAGTAAATTGGGCGGGATGTTGAGTTTCC
TGTATCCATTCCGGGAAAGTTCAGCAGAATCAACAGCAATATATGGGAACGTAGCGATTACTTATATGGTCAGGATGTTT
CGTGAAGAAGGGGCAAAAAAGAAAAATCTTCGATCGCAGATTTTTGGAGGTGCGGAATCAGATTGCTGCGAGGCAGATCA
AATCGCGCATGAAAACGTTAAGACGGCAAGGAGTGTTTTGAAAAAGCATGGGATAAAAGTGATATCAGAGGATGTGGGCG
GCCGGCTGGGTCGTAAGATTGTCTACAATACCTTTCAGAATGAAGCCCTGATCTACAAGGTCAATACGCTTCGAAACAGT
GACTGGTATCCATATGATGGGCAAGGCAGACAGGCATGA

Upstream 100 bases:

>100_bases
AACTCAATTCATGGCAGTCTTTATTTGATGTTGATGGAGAAAGTTTGGGCGTCCTGCTGCAGATGCAACGTCCGTAAAAC
CGGAAGTCGATTGTTTTAAT

Downstream 100 bases:

>100_bases
GCAAGATAAAGGTCTTGGTTGTTGATGATTCGGCGATTGTCAGAAAAATTTTTACCGAAGAGCTCTCGAAATATCCAGAT
ATAGAAGTTGTCGGGTCGGC

Product: chemotaxis protein that stimulates methylation of MCP proteins

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 172; Mature: 172

Protein sequence:

>172_residues
MNSKAIKPSCEYFLLPGYIFMSPEPYLISTVVGSSVAVALWDADSKLGGMLSFLYPFRESSAESTAIYGNVAITYMVRMF
REEGAKKKNLRSQIFGGAESDCCEADQIAHENVKTARSVLKKHGIKVISEDVGGRLGRKIVYNTFQNEALIYKVNTLRNS
DWYPYDGQGRQA

Sequences:

>Translated_172_residues
MNSKAIKPSCEYFLLPGYIFMSPEPYLISTVVGSSVAVALWDADSKLGGMLSFLYPFRESSAESTAIYGNVAITYMVRMF
REEGAKKKNLRSQIFGGAESDCCEADQIAHENVKTARSVLKKHGIKVISEDVGGRLGRKIVYNTFQNEALIYKVNTLRNS
DWYPYDGQGRQA
>Mature_172_residues
MNSKAIKPSCEYFLLPGYIFMSPEPYLISTVVGSSVAVALWDADSKLGGMLSFLYPFRESSAESTAIYGNVAITYMVRMF
REEGAKKKNLRSQIFGGAESDCCEADQIAHENVKTARSVLKKHGIKVISEDVGGRLGRKIVYNTFQNEALIYKVNTLRNS
DWYPYDGQGRQA

Specific function: Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis

COG id: COG1871

COG function: function code NT; Chemotaxis protein; stimulates methylation of MCP proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CheD family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): CHED2_SYNAS (Q2LSL4)

Other databases:

- EMBL:   CP000252
- RefSeq:   YP_461240.1
- ProteinModelPortal:   Q2LSL4
- SMR:   Q2LSL4
- STRING:   Q2LSL4
- GeneID:   3882493
- GenomeReviews:   CP000252_GR
- KEGG:   sat:SYN_00965
- NMPDR:   fig|56780.10.peg.1174
- eggNOG:   COG1871
- HOGENOM:   HBG531149
- OMA:   HARYVEC
- ProtClustDB:   CLSK771728
- BioCyc:   SACI56780:SYN_00965-MONOMER
- GO:   GO:0006935
- HAMAP:   MF_01440
- InterPro:   IPR005659

Pfam domain/function: PF03975 CheD

EC number: =3.5.1.44

Molecular weight: Translated: 19184; Mature: 19184

Theoretical pI: Translated: 8.74; Mature: 8.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNSKAIKPSCEYFLLPGYIFMSPEPYLISTVVGSSVAVALWDADSKLGGMLSFLYPFRES
CCCCCCCCCCCEEEECCEEEECCCCEEEEEECCCCEEEEEECCCCCHHHHHHHHHHHHCC
SAESTAIYGNVAITYMVRMFREEGAKKKNLRSQIFGGAESDCCEADQIAHENVKTARSVL
CCCCEEEEHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHH
KKHGIKVISEDVGGRLGRKIVYNTFQNEALIYKVNTLRNSDWYPYDGQGRQA
HHCCCEEEHHHHCHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCCCCC
>Mature Secondary Structure
MNSKAIKPSCEYFLLPGYIFMSPEPYLISTVVGSSVAVALWDADSKLGGMLSFLYPFRES
CCCCCCCCCCCEEEECCEEEECCCCEEEEEECCCCEEEEEECCCCCHHHHHHHHHHHHCC
SAESTAIYGNVAITYMVRMFREEGAKKKNLRSQIFGGAESDCCEADQIAHENVKTARSVL
CCCCEEEEHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHH
KKHGIKVISEDVGGRLGRKIVYNTFQNEALIYKVNTLRNSDWYPYDGQGRQA
HHCCCEEEHHHHCHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA